mtmt2ID BPV1 standard; DNA; VRL; 7945 BP. XX AC X02346; J02044; M24622; X00473; XX DT 01-JUL-1995 (Rel. 11, Created) DT 01-JUL-1995 (Rel. 12, Last updated, Version 1) XX DE Bovine papillomavirus type 1 (BPV-1) genome - complete. XX KW cloning vector. XX OS Bovine papillomavirus OC Viridae; ds-DNA nonenveloped viruses; Papovaviridae; OC Papillomavirus. XX RN [1] RP 1-7945 RX MEDLINE; 83012974. RA Chen E.Y., Howley P.M., Levinson A.D., Seeburg P.H.; RT "The primary structure and genetic organization of the bovine RT papillomavirus type 1 genome"; RL Nature 299:529-534(1982). XX RN [2] RP 7120-7399 RX MEDLINE; 87246504. RA Baker C.C., Howley P.M.; RT "Differential promoter utilization by the bovine papillomavirus in RT transformed cells and productively infected wart tissues"; RL EMBO J. 6:1027-1035(1987). XX CC NM (BPV-1) CC CM (yes) CC NA (ds-DNA) CC TP (linear) CC ST () CC TY (virus) CC SP () CC HO (cow) CC CP () CC FN (cloning) CC SE () CC PA (cow) CC BR () CC OF () CC OR () XX FH Key Location/Qualifiers FH FT misc_feature 0..0 FT /note="1. cow FT -> BPV-1 7945bp [bovine papillomavirus type 1]" FT repeat_unit 37..47 FT /note="inverted repeat A" FT promoter 58..63 FT /note="TATA sequence" FT misc_feature 89..91 FT /note="pot. cap site" FT misc_feature 182..183 FT /note="pot. splice site" FT promoter 4072..4077 FT /note="TATA sequence" FT misc_feature 4150..4150 FT /note="pot. open reading frame start site" FT CDS 4171..7092 FT /note="put. open reading frame" FT misc_feature 4179..4183 FT /note="polyadenylation signal" FT promoter 5089..5094 FT /note="TATA sequence" FT promoter 6859..6864 FT /note="TATA sequence" FT repeat_unit 7068..7081 FT /note="inverted repeat B" FT polyA_site 7083..7083 FT /note="pot. polyadenylation site" FT repeat_unit 7089..7098 FT /note="inverted repeat C" FT repeat_unit 7098..7108 FT /note="inverted repeat D" FT promoter 7108..7113 FT /note="TATA sequence" FT misc_RNA 7131..7133 FT /note="pot. cap site" FT misc_feature 7137..7138 FT /note="pot. splice site" FT repeat_unit 7139..7152 FT /note="inverted repeat E" FT repeat_unit 7241..7253 FT /note="inverted repeat E'" FT repeat_unit 7331..7341 FT /note="inverted repeat D'" FT repeat_unit 7435..7444 FT /note="inverted repeat C'" FT repeat_unit 7568..7581 FT /note="inverted repeat B" FT repeat_unit 7596..7606 FT /note="inverted repeat F" FT repeat_unit 7872..7882 FT /note="inverted repeat F'" FT repeat_unit 7921..7931 FT /note="inverted repeat A'" XX SQ Sequence 7945 BP; 2270 A; 1713 C; 1887 G; 2074 T; 1 other; gttaacaata atcacaccat caccgttttt tcaagcggga aaaaatagcc agctaactat aaaaagctgc tgacagaccc cggttttcac atggacctga aaccttttgc aagaaccaat ccattctcag ggttggattg tctgtggtgc agagagcctc ttacagaagt tgatgctttt aggtgcatgg tcaaagactt tcatgttgta attcgggaag gctgtagata tggtgcatgt accatttgtc ttgaaaactg tttagctact gaaagaagac tttggcaagg tgttccagta acaggtgagg aagctgaatt attgcatggc aaaacacttg ataggctttg cataagatgc tgctactgtg ggggcaaact aacaaaaaat gaaaaacatc ggcatgtgct ttttaatgag cctttctgca aaaccagagc taacataatt agaggacgct gctacgactg ctgcagacat ggttcaaggt ccaaataccc atagaaactt ggatgattca cctgcaggac cgttgctgat tttaagtcca tgtgcaggca cacctaccag gtctcctgca gcacctgatg cacctgattt cagacttccg tgccatttcg gccgtcctac taggaagcga ggtcccacta cccctccgct ttcctctccc ggaaaactgt gtgcaacagg gccacgtcga gtgtattctg tgactgtctg ctgtggaaac tgcggaaaag agctgacttt tgctgtgaag accagctcga cgtccctgct tggatttgaa caccttttaa actcagattt agacctcttg tgtccacgtt gtgaatctcg cgagcgtcat ggcaaacgat aaaggtagca attgggattc gggcttggga tgctcatatc tgctgactga ggcagaatgt gaaagtgaca aagagaatga ggaacccggg gcaggtgtag aactgtctgt ggaatctgat cggtatgata gccaggatga ggattttgtt gacaatgcat cagtctttca gggaaatcac ctggaggtct tccaggcatt agagaaaaag gcgggtgagg agcagatttt aaatttgaaa agaaaagtat tggggagttc gcaaaacagc agcggttccg aagcatctga aactccagtt aaaagacgga aatcaggagc aaagcgaaga ttatttgctg aaaangaagc taaccgtgtt cttacgcccc tccaggtaca gggggagggg gaggggaggc aagaacttaa tgaggagcag gcaattagtc atctacatct gcagcttgtt aaatctaaaa atgctacagt ttttaagctg gggctcttta aatctttgtt cctttgtagc ttccatgata ttacgaggtt gtttaagaat gataagacca ctaatcagca atgggtgctg gctgtgtttg gccttgcaga ggtgtttttt gaggcgagtt tcgaactcct aaagaagcag tgtagttttc tgcagatgca aaaaagatct catgaaggag gaacttgtgc agtttactta atctgcttta acacagctaa aagcagagaa acagtccgga atctgatggc aaacacgcta aatgtaagag aagagtgttt gatgctgcag ccagctaaaa ttcgaggact cagcgcagct ctattctggt ttaaaagtag tttgtcaccc gctacactta aacatggtgc tttacctgag tggatacggg cgcaaactac tctgaacgag agcttgcaga ccgagaaatt cgacttcgga actatggtgc aatgggccta tgatcacaaa tatgctgagg agtctaaaat agcctatgaa tatgctttgg ctgcaggatc tgatagcaat gcacgggctt ttttagcaac taacagccaa gctaagcatg tgaaggactg tgcaactatg gtaagacact atctaagagc tgaaacacaa gcattaagca tgcctgcata tattaaagct aggtgcaagc tggcaactgg ggaaggaagc tggaagtcta tcctaacttt ttttaactat cagaatattg aattaattac ctttattaat gctttaaagc tctggctaaa aggaattcca aaaaaaaact gtttagcatt tattggccct ccaaacacag gcaagtctat gctctgcaac tcattaattc attttttggg tggtagtgtt ttatcttttg ccaaccataa aagtcacttt tggcttgctt ccctagcaga tactagagct gctttagtag atgatgctac tcatgcttgc tggaggtact ttgacacata cctcagaaat gcattggatg gctaccctgt cagtattgat agaaaacaca aagcagcggt tcaaattaaa gctccacccc tcctggtaac cagtaatatt gatgtgcagg cagaggacag atatttgtac ttgcatagtc gggtgcaaac ctttcgcttt gagcagccat gcacagatga atcgggtgag caacctttta atattactga tgcagattgg aaatcttttt ttgtaaggtt atgggggcgt ttagacctga ttgacgagga ggaggatagt gaagaggatg gagacagcat gcgaacgttt acatgtagcg caagaaacac aaatgcagtt gattgagaaa agtagtgata agttgcaaga tcatatactg tactggactg ctgttagaac tgagaacaca ctgctttatg ctgcaaggaa aaaaggggtg actgtcctag gacactgcag agtaccacac tctgtagttt gtcaagagag agccaagcag gccattgaaa tgcagttgtc tttgcaggag ttaagcaaaa ctgagtttgg ggatgaacca tggtctttgc ttgacacaag ctgggaccga tatatgtcag aacctaaacg gtgctttaag aaaggcgcca gggtggtaga ggtggagttt gatggaaatg caagcaatac aaactggtac actgtctaca gcaatttgta catgcgcaca gaggacggct ggcagcttgc gaaggctggg gctgacggaa ctgggctcta ctactgcacc atggccggtg ctggacgcat ttactattct cgctttggtg acgaggcagc cagatttagt acaacagggc attactctgt aagagatcag gacagagtgt atgctggtgt ctcatccacc tcttctgatt ttagagatcg cccagacgga gtctgggtcg catccgaagg acctgaagga gaccctgcag gaaaagaagc cgagccagcc cagcctgtct cttctttgct cggctccccc gcctgcggtc ccatcagagc aggcctcggt tgggtacggg acggtcctcg ctcgcacccc tacaattttc ctgcaggctc ggggggctct attctccgct cttcctccac cccgtgcagg gcacggtacc ggtggacttg gcatcaaggc aggaagaaga ggagcagtcg cccgactcca cagaggaaga accagtgact ctcccaaggc gcaccaccaa tgatggattc cacctgttaa aggcaggagg gtcatgcttt gctctaattt caggaactgc taaccaggta aagtgctatc gctttcgggt gaaaaagaac catagacatc gctacgagaa ctgcaccacc acctggttca cagttgctga caacggtgct gaaagacaag gacaagcaca aatactgatc acctttggat cgccaagtca aaggcaagac tttctgaaac atgtaccact acctcctgga atgaacattt ccggctttac agccagcttg gacttctgat cactgccatt gccttttctt catctgactg gtgtactatg ccaaatctat ggtttctatt gttcttggga ctagttgctg caatgcaact gctgctatta ctgttcttac tcttgttttt tcttgtatac tgggatcatt ttgagtgctc ctgtacaggt ctgccctttt aatgccttta catcactggc tattggctgt gtttttactg ttgtgtggat ttgatttgtt ttatatactg tatgaagttt tttcatttgt gcttgtattg ctgtttgtaa gttttttact agagtttgta ttccccctgc tcagatttta tatggtttaa gctgcagcaa taaaaatgag tgcacgaaaa agagtaaaac gtgccagtgc ctatgacctg tacaggacat gcaagcaagc gggcacatgt ccaccagatg tgataccaaa ggtagaagga gatactatag cagataaaat tttgaaattt gggggtcttg caatctactt aggagggcta ggaataggaa catggtctac tggaagggtt gctgcaggtg gatcaccaag gtacacacca ctccgaacag cagggtccac atcatcgctt gcatcaatag gatccagagc tgtaacagca gggacccgcc ccagtatagg tgcgggcatt cctttagaca cccttgaaac tcttggggcc ttgcgtccag gggtgtatga ggacactgtg ctaccagagg cccctgcaat agtcactcct gatgctgttc ctgcagattc agggcttgat gccctgtcca taggtacaga ctcgtccacg gagaccctca ttactctgct agagcctgag ggtcccgagg acatagcggt tcttgagctg caacccctgg accgtccaac ttggcaagta agcaatgctg ttcatcagtc ctctgcatac cacgcccctc tgcagctgca atcgtccatt gcagaaacat ctggtttaga aaatattttt gtaggaggct cgggtttagg ggatacagga ggagaaaaca ttgaactgac atacttcggg tccccacgaa caagcacgcc ccgcagtatt gcctctaaat cacgtggcat tttaaactgg ttcagtaaac ggtactacac acaggtgccc acggaagatc ctgaagtgtt ttcatcccaa acatttgcaa acccactgta tgaagcagaa ccagctgtgc ttaagggacc tagtggacgt gttggactca gtcaggttta taaacctgat acacttacaa cacgtagcgg gacagaggtg ggaccacagc tacatgtcag gtactcattg agtactatac atgaagatgt agaagcaatc ccctacacag ttgatgaaaa tacacaggga cttgcattcg tacccttgca tgaagagcaa gcaggttttg aggagataga attagatgat tttagtgaga cacatagact gctacctcag aacacctctt ctacacctgt tggtagtggt gtacgaagaa gcctcattcc aactcaggaa tttagtgcaa cacggcctac aggtgttgta acctatggct cacctgacac ttactctgct agcccagtta ctgaccctga ttctacctct cctagtctag ttatcgatga cactactact acaccaatca ttataattga tgggcacaca gttgatttgt acagcagtaa ctacaccttg catccctcct tgttgaggaa acgaaaaaaa cggaaacatg cctaattttt tttgcagatg gcgttgtggc aacaaggcca gaagctgtat ctccctccaa cccctgtaag caaggtgctt tgcagtgaaa cctatgtgca aagaaaaagc attttttatc atgcagaaac ggagcgcctg ctaactatag gacatccata ttacccagtg tctatcgggg ccaaaactgt tcctaaggtc tctgcaaatc agtatagggt atttaaaata caactacctg atcccaatca atttgcacta cctgacagga ctgttcacaa cccaagtaaa gagcggctgg tgtgggcagt cataggtgtg caggtgtcca gagggcagcc tcttggaggt actgtaactg ggcaccccac ttttaatgct ttgcttgatg cagaaaatgt gaatagaaaa gtcaccaccc aaacaacaga tgacaggaaa caaacaggcc tagatgctaa gcaacaacag attctgttgc taggctgtac ccctgctgaa ggggaatatt ggacaacagc ccgtccatgt gttactgatc gtctagaaaa tggcgcctgc cctcctcttg aattaaaaaa caagcacata gaagatgggg atatgatgga aattgggttt ggtgcagcca acttcaaaga aattaatgca agtaaatcag atctacctct tgacattcaa aatgagatct gcttgtaccc agactacctc aaaatggctg aggacgctgc tggtaatagc atgttctttt ttgcaaggaa agaacaggtg tatgttagac acatctggac cagagggggc tcggagaaag aagcccctac cacagatttt tatttaaaga ataataaagg ggatgccacc cttaaaatac ccagtgtgca ttttggtagt cccagtggct cactagtctc aactgataat caaattttta atcggcccta ctggctattc cgtgcccagg gcatgaacaa tggaattgca tggaataatt tattgttttt aacagtgggg gacaatacac gtggtactaa tcttaccata agtgtagcct cagatggaac cccactaaca gagtatgata gctcaaaatt caatgtatac catagacata tggaagaata taagctagcc tttatattag agctatgctc tgtggaaatc acagctcaaa ctgtgtcaca tctgcaagga cttatgccct ctgtgcttga aaattgggaa ataggtgtgc agcctcctac ctcatcgata ttagaggaca cctatcgcta tatagagtct cctgcaacta aatgtgcaag caatgtaatt cctgcaaaag aagaccctta tgcagggttt aagttttgga acatagatct taaagaaaag ctttctttgg acttagatca atttcccttg ggaagaagat ttttagcaca gcaaggggca ggatgttcaa ctgtgagaaa acgaagaatt agccaaaaaa cttccagtaa gcctgcaaaa aaaaaaaaaa aataaaagct aagtttctat aaatgttctg taaatgtaaa acagaaggta agtcaactgc acctaataaa aatcacttaa tagcaatgtg ctgtgtcagt tgtttattgg aaccacaccc ggtacacatc ctgtccagca tttgcagtgc gtgcattgaa ttattgtgct ggctagactt catggcgcct ggcaccgaat cctgccttct cagcgaaaat gaataattgc tttgttggca agaaactaag catcaatggg acgcgtgcaa agcaccggcg gcggtagatg cggggtaagt actgaatttt aattcgacct atcccggtaa agcgaaagcg acacgctttt ttttcacaca tagcgggacc gaacacgtta taagtatcga ttaggtctat ttttgtctct ctgtcggaac cagaactggt aaaagtttcc attgcgtctg ggcttgtcta tcattgcgtc tctatggttt ttggaggatt agacggggcc accagtaatg gtgcatagcg gatgtctgta ccgccatcgg tgcaccgata taggtttggg gctccccaag ggactgctgg gatgacagct tcatattata ttgaatgggc gcataatcag cttaattggt gaggacaagc tacaagttgt aacctgatct ccacaaagta cgttgccggt cggggtcaaa ccgtcttcgg tgctcgaaac cgccttaaac tacagacagg tcccagccaa gtaggcggat caaaacctca aaaaggcggg agccaatcaa aatgcagcat tatattttaa gctcaccgaa accggtaagt aaagactatg tattttttcc cagtgaataa ttgtt // BPV-1 "Times New RomanmtC Qj  Orf frame 3"Times New RomanmtC 0  Orf frame 1"Times New RomanmtCɆ Z Orf frame 1"Times New Romanmt  Orf frame 1"Times New Roman mtHpaI"Times New Roman  wwuwa`Ra mtEagI"Times New Romank  s mtAatII"Times New Roman ! U mtNruI"Times New RomanH   &&^ mtSmaI"Times New Roman "**d mtBstBI"Times New Roman  Vi{ { mtEcoRI"Times New RomanA  k~ mtFspI"Times New Roman  1+?8M8Mv\ mtKpnI"Times New Roman  ]p  mtBamHI"Times New Romanb  bu5 mtAflII"Times New Roman  !/<d<K mtXbaI"Times New Roman  `o][ZS[a mtNdeI"Times New Roman*  G mtHindIII"Times New Roman.  `