Sequence of BPV-1

This sequnce graph is created using BVTech Plasmid, which is DNA sequence analysis and plasmid drawing software for Windows PCs.You can use it to plan your DNA cloning, draw high quality plasmid maps, analyse your DNA sequencing data, align sequences, and much more.

Free to try, $39.98 to buy

Payments will be processed by PayPal. PayPal is the safer, easier way to pay.

Sequence of BPV-1

Download the sequence and plasmid map, and then use BVTech Plasmid to view and edit the file.

If you do not have BVTech Plasmid, download the latest version of BVTech Plasmid here.

View the plasmid map on line

Sequence of BPV-1 : 7945 BP; 2270 A; 1713 C; 1887 G; 2074 T; 1 other;

HpaI(3) .......... .......... .......... .......... ..........

1 gttaacaata atcacaccat caccgttttt tcaagcggga aaaaatagcc agctaactat 60

1 caattgttat tagtgtggta gtggcaaaaa agttcgccct tttttatcgg tcgattgata 60

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

61 aaaaagctgc tgacagaccc cggttttcac atggacctga aaccttttgc aagaaccaat 120

61 tttttcgacg actgtctggg gccaaaagtg tacctggact ttggaaaacg ttcttggtta 120

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

121 ccattctcag ggttggattg tctgtggtgc agagagcctc ttacagaagt tgatgctttt 180

121 ggtaagagtc ccaacctaac agacaccacg tctctcggag aatgtcttca actacgaaaa 180

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

181 aggtgcatgg tcaaagactt tcatgttgta attcgggaag gctgtagata tggtgcatgt 240

181 tccacgtacc agtttctgaa agtacaacat taagcccttc cgacatctat accacgtaca 240

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

241 accatttgtc ttgaaaactg tttagctact gaaagaagac tttggcaagg tgttccagta 300

241 tggtaaacag aacttttgac aaatcgatga ctttcttctg aaaccgttcc acaaggtcat 300

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

301 acaggtgagg aagctgaatt attgcatggc aaaacacttg ataggctttg cataagatgc 360

301 tgtccactcc ttcgacttaa taacgtaccg ttttgtgaac tatccgaaac gtattctacg 360

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

361 tgctactgtg ggggcaaact aacaaaaaat gaaaaacatc ggcatgtgct ttttaatgag 420

361 acgatgacac ccccgtttga ttgtttttta ctttttgtag ccgtacacga aaaattactc 420

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

421 cctttctgca aaaccagagc taacataatt agaggacgct gctacgactg ctgcagacat 480

421 ggaaagacgt tttggtctcg attgtattaa tctcctgcga cgatgctgac gacgtctgta 480

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

481 ggttcaaggt ccaaataccc atagaaactt ggatgattca cctgcaggac cgttgctgat 540

481 ccaagttcca ggtttatggg tatctttgaa cctactaagt ggacgtcctg gcaacgacta 540

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

541 tttaagtcca tgtgcaggca cacctaccag gtctcctgca gcacctgatg cacctgattt 600

541 aaattcaggt acacgtccgt gtggatggtc cagaggacgt cgtggactac gtggactaaa 600

.......... .......... .......... .......... .......... ..........

.......... EagI(619) .......... .......... .......... ..........

601 cagacttccg tgccatttcg gccgtcctac taggaagcga ggtcccacta cccctccgct 660

601 gtctgaaggc acggtaaagc cggcaggatg atccttcgct ccagggtgat ggggaggcga 660

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

661 ttcctctccc ggaaaactgt gtgcaacagg gccacgtcga gtgtattctg tgactgtctg 720

661 aaggagaggg ccttttgaca cacgttgtcc cggtgcagct cacataagac actgacagac 720

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... AatII(773)

721 ctgtggaaac tgcggaaaag agctgacttt tgctgtgaag accagctcga cgtccctgct 780

721 gacacctttg acgccttttc tcgactgaaa acgacacttc tggtcgagct gcagggacga 780

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... NruI(840)

781 tggatttgaa caccttttaa actcagattt agacctcttg tgtccacgtt gtgaatctcg 840

781 acctaaactt gtggaaaatt tgagtctaaa tctggagaac acaggtgcaa cacttagagc 840

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

841 cgagcgtcat ggcaaacgat aaaggtagca attgggattc gggcttggga tgctcatatc 900

841 gctcgcagta ccgtttgcta tttccatcgt taaccctaag cccgaaccct acgagtatag 900

.......... .......... ......... Orf frame 3 ......... ..........

.......... .......... .......... .......... SmaI(947) ..........

901 tgctgactga ggcagaatgt gaaagtgaca aagagaatga ggaacccggg gcaggtgtag 960

901 acgactgact ccgtcttaca ctttcactgt ttctcttact ccttgggccc cgtccacatc 960

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

961 aactgtctgt ggaatctgat cggtatgata gccaggatga ggattttgtt gacaatgcat 1020

961 ttgacagaca ccttagacta gccatactat cggtcctact cctaaaacaa ctgttacgta 1020

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1021 cagtctttca gggaaatcac ctggaggtct tccaggcatt agagaaaaag gcgggtgagg 1080

1021 gtcagaaagt ccctttagtg gacctccaga aggtccgtaa tctctttttc cgcccactcc 1080

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1081 agcagatttt aaatttgaaa agaaaagtat tggggagttc gcaaaacagc agcggttccg 1140

1081 tcgtctaaaa tttaaacttt tcttttcata acccctcaag cgttttgtcg tcgccaaggc 1140

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1141 aagcatctga aactccagtt aaaagacgga aatcaggagc aaagcgaaga ttatttgctg 1200

1141 ttcgtagact ttgaggtcaa ttttctgcct ttagtcctcg tttcgcttct aataaacgac 1200

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1201 aaaangaagc taaccgtgtt cttacgcccc tccaggtaca gggggagggg gaggggaggc 1260

1201 ttttncttcg attggcacaa gaatgcgggg aggtccatgt ccccctcccc ctcccctccg 1260

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1261 aagaacttaa tgaggagcag gcaattagtc atctacatct gcagcttgtt aaatctaaaa 1320

1261 ttcttgaatt actcctcgtc cgttaatcag tagatgtaga cgtcgaacaa tttagatttt 1320

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1321 atgctacagt ttttaagctg gggctcttta aatctttgtt cctttgtagc ttccatgata 1380

1321 tacgatgtca aaaattcgac cccgagaaat ttagaaacaa ggaaacatcg aaggtactat 1380

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1381 ttacgaggtt gtttaagaat gataagacca ctaatcagca atgggtgctg gctgtgtttg 1440

1381 aatgctccaa caaattctta ctattctggt gattagtcgt tacccacgac cgacacaaac 1440

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... ......... BstBI(1471) ......... ..........

1441 gccttgcaga ggtgtttttt gaggcgagtt tcgaactcct aaagaagcag tgtagttttc 1500

1441 cggaacgtct ccacaaaaaa ctccgctcaa agcttgagga tttcttcgtc acatcaaaag 1500

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1501 tgcagatgca aaaaagatct catgaaggag gaacttgtgc agtttactta atctgcttta 1560

1501 acgtctacgt tttttctaga gtacttcctc cttgaacacg tcaaatgaat tagacgaaat 1560

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1561 acacagctaa aagcagagaa acagtccgga atctgatggc aaacacgcta aatgtaagag 1620

1561 tgtgtcgatt ttcgtctctt tgtcaggcct tagactaccg tttgtgcgat ttacattctc 1620

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1621 aagagtgttt gatgctgcag ccagctaaaa ttcgaggact cagcgcagct ctattctggt 1680

1621 ttctcacaaa ctacgacgtc ggtcgatttt aagctcctga gtcgcgtcga gataagacca 1680

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1681 ttaaaagtag tttgtcaccc gctacactta aacatggtgc tttacctgag tggatacggg 1740

1681 aattttcatc aaacagtggg cgatgtgaat ttgtaccacg aaatggactc acctatgccc 1740

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1741 cgcaaactac tctgaacgag agcttgcaga ccgagaaatt cgacttcgga actatggtgc 1800

1741 gcgtttgatg agacttgctc tcgaacgtct ggctctttaa gctgaagcct tgataccacg 1800

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1801 aatgggccta tgatcacaaa tatgctgagg agtctaaaat agcctatgaa tatgctttgg 1860

1801 ttacccggat actagtgttt atacgactcc tcagatttta tcggatactt atacgaaacc 1860

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1861 ctgcaggatc tgatagcaat gcacgggctt ttttagcaac taacagccaa gctaagcatg 1920

1861 gacgtcctag actatcgtta cgtgcccgaa aaaatcgttg attgtcggtt cgattcgtac 1920

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1921 tgaaggactg tgcaactatg gtaagacact atctaagagc tgaaacacaa gcattaagca 1980

1921 acttcctgac acgttgatac cattctgtga tagattctcg actttgtgtt cgtaattcgt 1980

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

1981 tgcctgcata tattaaagct aggtgcaagc tggcaactgg ggaaggaagc tggaagtcta 2040

1981 acggacgtat ataatttcga tccacgttcg accgttgacc ccttccttcg accttcagat 2040

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2041 tcctaacttt ttttaactat cagaatattg aattaattac ctttattaat gctttaaagc 2100

2041 aggattgaaa aaaattgata gtcttataac ttaattaatg gaaataatta cgaaatttcg 2100

.......... ......... Orf frame 3 ......... .......... ..........

......... EcoRI(2113) ......... .......... .......... ..........

2101 tctggctaaa aggaattcca aaaaaaaact gtttagcatt tattggccct ccaaacacag 2160

2101 agaccgattt tccttaaggt ttttttttga caaatcgtaa ataaccggga ggtttgtgtc 2160

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2161 gcaagtctat gctctgcaac tcattaattc attttttggg tggtagtgtt ttatcttttg 2220

2161 cgttcagata cgagacgttg agtaattaag taaaaaaccc accatcacaa aatagaaaac 2220

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2221 ccaaccataa aagtcacttt tggcttgctt ccctagcaga tactagagct gctttagtag 2280

2221 ggttggtatt ttcagtgaaa accgaacgaa gggatcgtct atgatctcga cgaaatcatc 2280

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2281 atgatgctac tcatgcttgc tggaggtact ttgacacata cctcagaaat gcattggatg 2340

2281 tactacgatg agtacgaacg acctccatga aactgtgtat ggagtcttta cgtaacctac 2340

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2341 gctaccctgt cagtattgat agaaaacaca aagcagcggt tcaaattaaa gctccacccc 2400

2341 cgatgggaca gtcataacta tcttttgtgt ttcgtcgcca agtttaattt cgaggtgggg 2400

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2401 tcctggtaac cagtaatatt gatgtgcagg cagaggacag atatttgtac ttgcatagtc 2460

2401 aggaccattg gtcattataa ctacacgtcc gtctcctgtc tataaacatg aacgtatcag 2460

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2461 gggtgcaaac ctttcgcttt gagcagccat gcacagatga atcgggtgag caacctttta 2520

2461 cccacgtttg gaaagcgaaa ctcgtcggta cgtgtctact tagcccactc gttggaaaat 2520

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2521 atattactga tgcagattgg aaatcttttt ttgtaaggtt atgggggcgt ttagacctga 2580

2521 tataatgact acgtctaacc tttagaaaaa aacattccaa tacccccgca aatctggact 2580

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2581 ttgacgagga ggaggatagt gaagaggatg gagacagcat gcgaacgttt acatgtagcg 2640

2581 aactgctcct cctcctatca cttctcctac ctctgtcgta cgcttgcaaa tgtacatcgc 2640

.......... ......... Orf frame 3 ........ Orf frame 1 .........

.......... .......... .......... .......... .......... ..........

2641 caagaaacac aaatgcagtt gattgagaaa agtagtgata agttgcaaga tcatatactg 2700

2641 gttctttgtg tttacgtcaa ctaactcttt tcatcactat tcaacgttct agtatatgac 2700

........ Orf frame 3 Orf frame 1 ........ .......... ..........

.......... .......... .......... .......... .......... ..........

2701 tactggactg ctgttagaac tgagaacaca ctgctttatg ctgcaaggaa aaaaggggtg 2760

2701 atgacctgac gacaatcttg actcttgtgt gacgaaatac gacgttcctt ttttccccac 2760

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2761 actgtcctag gacactgcag agtaccacac tctgtagttt gtcaagagag agccaagcag 2820

2761 tgacaggatc ctgtgacgtc tcatggtgtg agacatcaaa cagttctctc tcggttcgtc 2820

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2821 gccattgaaa tgcagttgtc tttgcaggag ttaagcaaaa ctgagtttgg ggatgaacca 2880

2821 cggtaacttt acgtcaacag aaacgtcctc aattcgtttt gactcaaacc cctacttggt 2880

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2881 tggtctttgc ttgacacaag ctgggaccga tatatgtcag aacctaaacg gtgctttaag 2940

2881 accagaaacg aactgtgttc gaccctggct atatacagtc ttggatttgc cacgaaattc 2940

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2941 aaaggcgcca gggtggtaga ggtggagttt gatggaaatg caagcaatac aaactggtac 3000

2941 tttccgcggt cccaccatct ccacctcaaa ctacctttac gttcgttatg tttgaccatg 3000

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... FspI(3025) .......... .......... ..........

3001 actgtctaca gcaatttgta catgcgcaca gaggacggct ggcagcttgc gaaggctggg 3060

3001 tgacagatgt cgttaaacat gtacgcgtgt ctcctgccga ccgtcgaacg cttccgaccc 3060

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3061 gctgacggaa ctgggctcta ctactgcacc atggccggtg ctggacgcat ttactattct 3120

3061 cgactgcctt gacccgagat gatgacgtgg taccggccac gacctgcgta aatgataaga 3120

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3121 cgctttggtg acgaggcagc cagatttagt acaacagggc attactctgt aagagatcag 3180

3121 gcgaaaccac tgctccgtcg gtctaaatca tgttgtcccg taatgagaca ttctctagtc 3180

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3181 gacagagtgt atgctggtgt ctcatccacc tcttctgatt ttagagatcg cccagacgga 3240

3181 ctgtctcaca tacgaccaca gagtaggtgg agaagactaa aatctctagc gggtctgcct 3240

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3241 gtctgggtcg catccgaagg acctgaagga gaccctgcag gaaaagaagc cgagccagcc 3300

3241 cagacccagc gtaggcttcc tggacttcct ctgggacgtc cttttcttcg gctcggtcgg 3300

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3301 cagcctgtct cttctttgct cggctccccc gcctgcggtc ccatcagagc aggcctcggt 3360

3301 gtcggacaga gaagaaacga gccgaggggg cggacgccag ggtagtctcg tccggagcca 3360

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3361 tgggtacggg acggtcctcg ctcgcacccc tacaattttc ctgcaggctc ggggggctct 3420

3361 acccatgccc tgccaggagc gagcgtgggg atgttaaaag gacgtccgag ccccccgaga 3420

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... KpnI(3459) .......... ..........

3421 attctccgct cttcctccac cccgtgcagg gcacggtacc ggtggacttg gcatcaaggc 3480

3421 taagaggcga gaaggaggtg gggcacgtcc cgtgccatgg ccacctgaac cgtagttccg 3480

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3481 aggaagaaga ggagcagtcg cccgactcca cagaggaaga accagtgact ctcccaaggc 3540

3481 tccttcttct cctcgtcagc gggctgaggt gtctccttct tggtcactga gagggttccg 3540

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3541 gcaccaccaa tgatggattc cacctgttaa aggcaggagg gtcatgcttt gctctaattt 3600

3541 cgtggtggtt actacctaag gtggacaatt tccgtcctcc cagtacgaaa cgagattaaa 3600

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3601 caggaactgc taaccaggta aagtgctatc gctttcgggt gaaaaagaac catagacatc 3660

3601 gtccttgacg attggtccat ttcacgatag cgaaagccca ctttttcttg gtatctgtag 3660

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3661 gctacgagaa ctgcaccacc acctggttca cagttgctga caacggtgct gaaagacaag 3720

3661 cgatgctctt gacgtggtgg tggaccaagt gtcaacgact gttgccacga ctttctgttc 3720

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3721 gacaagcaca aatactgatc acctttggat cgccaagtca aaggcaagac tttctgaaac 3780

3721 ctgttcgtgt ttatgactag tggaaaccta gcggttcagt ttccgttctg aaagactttg 3780

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3781 atgtaccact acctcctgga atgaacattt ccggctttac agccagcttg gacttctgat 3840

3781 tacatggtga tggaggacct tacttgtaaa ggccgaaatg tcggtcgaac ctgaagacta 3840

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3841 cactgccatt gccttttctt catctgactg gtgtactatg ccaaatctat ggtttctatt 3900

3841 gtgacggtaa cggaaaagaa gtagactgac cacatgatac ggtttagata ccaaagataa 3900

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3901 gttcttggga ctagttgctg caatgcaact gctgctatta ctgttcttac tcttgttttt 3960

3901 caagaaccct gatcaacgac gttacgttga cgacgataat gacaagaatg agaacaaaaa 3960

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3961 tcttgtatac tgggatcatt ttgagtgctc ctgtacaggt ctgccctttt aatgccttta 4020

3961 agaacatatg accctagtaa aactcacgag gacatgtcca gacgggaaaa ttacggaaat 4020

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

4021 catcactggc tattggctgt gtttttactg ttgtgtggat ttgatttgtt ttatatactg 4080

4021 gtagtgaccg ataaccgaca caaaaatgac aacacaccta aactaaacaa aatatatgac 4080

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

4081 tatgaagttt tttcatttgt gcttgtattg ctgtttgtaa gttttttact agagtttgta 4140

4081 atacttcaaa aaagtaaaca cgaacataac gacaaacatt caaaaaatga tctcaaacat 4140

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

4141 ttccccctgc tcagatttta tatggtttaa gctgcagcaa taaaaatgag tgcacgaaaa 4200

4141 aagggggacg agtctaaaat ataccaaatt cgacgtcgtt atttttactc acgtgctttt 4200

.......... .......... .......... .......... ......... Orf frame 1

.......... .......... .......... .......... .......... ..........

4201 agagtaaaac gtgccagtgc ctatgacctg tacaggacat gcaagcaagc gggcacatgt 4260

4201 tctcattttg cacggtcacg gatactggac atgtcctgta cgttcgttcg cccgtgtaca 4260

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4261 ccaccagatg tgataccaaa ggtagaagga gatactatag cagataaaat tttgaaattt 4320

4261 ggtggtctac actatggttt ccatcttcct ctatgatatc gtctatttta aaactttaaa 4320

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4321 gggggtcttg caatctactt aggagggcta ggaataggaa catggtctac tggaagggtt 4380

4321 cccccagaac gttagatgaa tcctcccgat ccttatcctt gtaccagatg accttcccaa 4380

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4381 gctgcaggtg gatcaccaag gtacacacca ctccgaacag cagggtccac atcatcgctt 4440

4381 cgacgtccac ctagtggttc catgtgtggt gaggcttgtc gtcccaggtg tagtagcgaa 4440

.......... ......... Orf frame 1 ......... .......... ..........

BamHI(4450) ........ .......... .......... .......... ..........

4441 gcatcaatag gatccagagc tgtaacagca gggacccgcc ccagtatagg tgcgggcatt 4500

4441 cgtagttatc ctaggtctcg acattgtcgt ccctgggcgg ggtcatatcc acgcccgtaa 4500

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4501 cctttagaca cccttgaaac tcttggggcc ttgcgtccag gggtgtatga ggacactgtg 4560

4501 ggaaatctgt gggaactttg agaaccccgg aacgcaggtc cccacatact cctgtgacac 4560

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4561 ctaccagagg cccctgcaat agtcactcct gatgctgttc ctgcagattc agggcttgat 4620

4561 gatggtctcc ggggacgtta tcagtgagga ctacgacaag gacgtctaag tcccgaacta 4620

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4621 gccctgtcca taggtacaga ctcgtccacg gagaccctca ttactctgct agagcctgag 4680

4621 cgggacaggt atccatgtct gagcaggtgc ctctgggagt aatgagacga tctcggactc 4680

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4681 ggtcccgagg acatagcggt tcttgagctg caacccctgg accgtccaac ttggcaagta 4740

4681 ccagggctcc tgtatcgcca agaactcgac gttggggacc tggcaggttg aaccgttcat 4740

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4741 agcaatgctg ttcatcagtc ctctgcatac cacgcccctc tgcagctgca atcgtccatt 4800

4741 tcgttacgac aagtagtcag gagacgtatg gtgcggggag acgtcgacgt tagcaggtaa 4800

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4801 gcagaaacat ctggtttaga aaatattttt gtaggaggct cgggtttagg ggatacagga 4860

4801 cgtctttgta gaccaaatct tttataaaaa catcctccga gcccaaatcc cctatgtcct 4860

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4861 ggagaaaaca ttgaactgac atacttcggg tccccacgaa caagcacgcc ccgcagtatt 4920

4861 cctcttttgt aacttgactg tatgaagccc aggggtgctt gttcgtgcgg ggcgtcataa 4920

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4921 gcctctaaat cacgtggcat tttaaactgg ttcagtaaac ggtactacac acaggtgccc 4980

4921 cggagattta gtgcaccgta aaatttgacc aagtcatttg ccatgatgtg tgtccacggg 4980

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4981 acggaagatc ctgaagtgtt ttcatcccaa acatttgcaa acccactgta tgaagcagaa 5040

4981 tgccttctag gacttcacaa aagtagggtt tgtaaacgtt tgggtgacat acttcgtctt 5040

.......... ......... Orf frame 1 ......... .......... ..........

AflII(5050) ........ .......... .......... .......... ..........

5041 ccagctgtgc ttaagggacc tagtggacgt gttggactca gtcaggttta taaacctgat 5100

5041 ggtcgacacg aattccctgg atcacctgca caacctgagt cagtccaaat atttggacta 5100

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5101 acacttacaa cacgtagcgg gacagaggtg ggaccacagc tacatgtcag gtactcattg 5160

5101 tgtgaatgtt gtgcatcgcc ctgtctccac cctggtgtcg atgtacagtc catgagtaac 5160

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5161 agtactatac atgaagatgt agaagcaatc ccctacacag ttgatgaaaa tacacaggga 5220

5161 tcatgatatg tacttctaca tcttcgttag gggatgtgtc aactactttt atgtgtccct 5220

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5221 cttgcattcg tacccttgca tgaagagcaa gcaggttttg aggagataga attagatgat 5280

5221 gaacgtaagc atgggaacgt acttctcgtt cgtccaaaac tcctctatct taatctacta 5280

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5281 tttagtgaga cacatagact gctacctcag aacacctctt ctacacctgt tggtagtggt 5340

5281 aaatcactct gtgtatctga cgatggagtc ttgtggagaa gatgtggaca accatcacca 5340

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5341 gtacgaagaa gcctcattcc aactcaggaa tttagtgcaa cacggcctac aggtgttgta 5400

5341 catgcttctt cggagtaagg ttgagtcctt aaatcacgtt gtgccggatg tccacaacat 5400

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5401 acctatggct cacctgacac ttactctgct agcccagtta ctgaccctga ttctacctct 5460

5401 tggataccga gtggactgtg aatgagacga tcgggtcaat gactgggact aagatggaga 5460

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5461 cctagtctag ttatcgatga cactactact acaccaatca ttataattga tgggcacaca 5520

5461 ggatcagatc aatagctact gtgatgatga tgtggttagt aatattaact acccgtgtgt 5520

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5521 gttgatttgt acagcagtaa ctacaccttg catccctcct tgttgaggaa acgaaaaaaa 5580

5521 caactaaaca tgtcgtcatt gatgtggaac gtagggagga acaactcctt tgcttttttt 5580

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5581 cggaaacatg cctaattttt tttgcagatg gcgttgtggc aacaaggcca gaagctgtat 5640

5581 gcctttgtac ggattaaaaa aaacgtctac cgcaacaccg ttgttccggt cttcgacata 5640

Orf frame 1 ........ .......... ......... Orf frame 1 .........

.......... .......... .......... .......... .......... ..........

5641 ctccctccaa cccctgtaag caaggtgctt tgcagtgaaa cctatgtgca aagaaaaagc 5700

5641 gagggaggtt ggggacattc gttccacgaa acgtcacttt ggatacacgt ttctttttcg 5700

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5701 attttttatc atgcagaaac ggagcgcctg ctaactatag gacatccata ttacccagtg 5760

5701 taaaaaatag tacgtctttg cctcgcggac gattgatatc ctgtaggtat aatgggtcac 5760

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5761 tctatcgggg ccaaaactgt tcctaaggtc tctgcaaatc agtatagggt atttaaaata 5820

5761 agatagcccc ggttttgaca aggattccag agacgtttag tcatatccca taaattttat 5820

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5821 caactacctg atcccaatca atttgcacta cctgacagga ctgttcacaa cccaagtaaa 5880

5821 gttgatggac tagggttagt taaacgtgat ggactgtcct gacaagtgtt gggttcattt 5880

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5881 gagcggctgg tgtgggcagt cataggtgtg caggtgtcca gagggcagcc tcttggaggt 5940

5881 ctcgccgacc acacccgtca gtatccacac gtccacaggt ctcccgtcgg agaacctcca 5940

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5941 actgtaactg ggcaccccac ttttaatgct ttgcttgatg cagaaaatgt gaatagaaaa 6000

5941 tgacattgac ccgtggggtg aaaattacga aacgaactac gtcttttaca cttatctttt 6000

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6001 gtcaccaccc aaacaacaga tgacaggaaa caaacaggcc tagatgctaa gcaacaacag 6060

6001 cagtggtggg tttgttgtct actgtccttt gtttgtccgg atctacgatt cgttgttgtc 6060

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6061 attctgttgc taggctgtac ccctgctgaa ggggaatatt ggacaacagc ccgtccatgt 6120

6061 taagacaacg atccgacatg gggacgactt ccccttataa cctgttgtcg ggcaggtaca 6120

.......... ......... Orf frame 1 ......... .......... ..........

.......... XbaI(6132) .......... .......... .......... ..........

6121 gttactgatc gtctagaaaa tggcgcctgc cctcctcttg aattaaaaaa caagcacata 6180

6121 caatgactag cagatctttt accgcggacg ggaggagaac ttaatttttt gttcgtgtat 6180

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6181 gaagatgggg atatgatgga aattgggttt ggtgcagcca acttcaaaga aattaatgca 6240

6181 cttctacccc tatactacct ttaacccaaa ccacgtcggt tgaagtttct ttaattacgt 6240

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6241 agtaaatcag atctacctct tgacattcaa aatgagatct gcttgtaccc agactacctc 6300

6241 tcatttagtc tagatggaga actgtaagtt ttactctaga cgaacatggg tctgatggag 6300

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6301 aaaatggctg aggacgctgc tggtaatagc atgttctttt ttgcaaggaa agaacaggtg 6360

6301 ttttaccgac tcctgcgacg accattatcg tacaagaaaa aacgttcctt tcttgtccac 6360

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6361 tatgttagac acatctggac cagagggggc tcggagaaag aagcccctac cacagatttt 6420

6361 atacaatctg tgtagacctg gtctcccccg agcctctttc ttcggggatg gtgtctaaaa 6420

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6421 tatttaaaga ataataaagg ggatgccacc cttaaaatac ccagtgtgca ttttggtagt 6480

6421 ataaatttct tattatttcc cctacggtgg gaattttatg ggtcacacgt aaaaccatca 6480

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6481 cccagtggct cactagtctc aactgataat caaattttta atcggcccta ctggctattc 6540

6481 gggtcaccga gtgatcagag ttgactatta gtttaaaaat tagccgggat gaccgataag 6540

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6541 cgtgcccagg gcatgaacaa tggaattgca tggaataatt tattgttttt aacagtgggg 6600

6541 gcacgggtcc cgtacttgtt accttaacgt accttattaa ataacaaaaa ttgtcacccc 6600

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6601 gacaatacac gtggtactaa tcttaccata agtgtagcct cagatggaac cccactaaca 6660

6601 ctgttatgtg caccatgatt agaatggtat tcacatcgga gtctaccttg gggtgattgt 6660

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... NdeI(6698) .......... ..........

6661 gagtatgata gctcaaaatt caatgtatac catagacata tggaagaata taagctagcc 6720

6661 ctcatactat cgagttttaa gttacatatg gtatctgtat accttcttat attcgatcgg 6720

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6721 tttatattag agctatgctc tgtggaaatc acagctcaaa ctgtgtcaca tctgcaagga 6780

6721 aaatataatc tcgatacgag acacctttag tgtcgagttt gacacagtgt agacgttcct 6780

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6781 cttatgccct ctgtgcttga aaattgggaa ataggtgtgc agcctcctac ctcatcgata 6840

6781 gaatacggga gacacgaact tttaaccctt tatccacacg tcggaggatg gagtagctat 6840

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6841 ttagaggaca cctatcgcta tatagagtct cctgcaacta aatgtgcaag caatgtaatt 6900

6841 aatctcctgt ggatagcgat atatctcaga ggacgttgat ttacacgttc gttacattaa 6900

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... ........ HindIII(6958)

6901 cctgcaaaag aagaccctta tgcagggttt aagttttgga acatagatct taaagaaaag 6960

6901 ggacgttttc ttctgggaat acgtcccaaa ttcaaaacct tgtatctaga atttcttttc 6960

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

6961 ctttctttgg acttagatca atttcccttg ggaagaagat ttttagcaca gcaaggggca 7020

6961 gaaagaaacc tgaatctagt taaagggaac ccttcttcta aaaatcgtgt cgttccccgt 7020

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

7021 ggatgttcaa ctgtgagaaa acgaagaatt agccaaaaaa cttccagtaa gcctgcaaaa 7080

7021 cctacaagtt gacactcttt tgcttcttaa tcggtttttt gaaggtcatt cggacgtttt 7080

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

7081 aaaaaaaaaa aataaaagct aagtttctat aaatgttctg taaatgtaaa acagaaggta 7140

7081 tttttttttt ttattttcga ttcaaagata tttacaagac atttacattt tgtcttccat 7140

Orf frame 1 ........ .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7141 agtcaactgc acctaataaa aatcacttaa tagcaatgtg ctgtgtcagt tgtttattgg 7200

7141 tcagttgacg tggattattt ttagtgaatt atcgttacac gacacagtca acaaataacc 7200

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7201 aaccacaccc ggtacacatc ctgtccagca tttgcagtgc gtgcattgaa ttattgtgct 7260

7201 ttggtgtggg ccatgtgtag gacaggtcgt aaacgtcacg cacgtaactt aataacacga 7260

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7261 ggctagactt catggcgcct ggcaccgaat cctgccttct cagcgaaaat gaataattgc 7320

7261 ccgatctgaa gtaccgcgga ccgtggctta ggacggaaga gtcgctttta cttattaacg 7320

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7321 tttgttggca agaaactaag catcaatggg acgcgtgcaa agcaccggcg gcggtagatg 7380

7321 aaacaaccgt tctttgattc gtagttaccc tgcgcacgtt tcgtggccgc cgccatctac 7380

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7381 cggggtaagt actgaatttt aattcgacct atcccggtaa agcgaaagcg acacgctttt 7440

7381 gccccattca tgacttaaaa ttaagctgga tagggccatt tcgctttcgc tgtgcgaaaa 7440

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7441 ttttcacaca tagcgggacc gaacacgtta taagtatcga ttaggtctat ttttgtctct 7500

7441 aaaagtgtgt atcgccctgg cttgtgcaat attcatagct aatccagata aaaacagaga 7500

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7501 ctgtcggaac cagaactggt aaaagtttcc attgcgtctg ggcttgtcta tcattgcgtc 7560

7501 gacagccttg gtcttgacca ttttcaaagg taacgcagac ccgaacagat agtaacgcag 7560

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7561 tctatggttt ttggaggatt agacggggcc accagtaatg gtgcatagcg gatgtctgta 7620

7561 agataccaaa aacctcctaa tctgccccgg tggtcattac cacgtatcgc ctacagacat 7620

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7621 ccgccatcgg tgcaccgata taggtttggg gctccccaag ggactgctgg gatgacagct 7680

7621 ggcggtagcc acgtggctat atccaaaccc cgaggggttc cctgacgacc ctactgtcga 7680

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7681 tcatattata ttgaatgggc gcataatcag cttaattggt gaggacaagc tacaagttgt 7740

7681 agtataatat aacttacccg cgtattagtc gaattaacca ctcctgttcg atgttcaaca 7740

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7741 aacctgatct ccacaaagta cgttgccggt cggggtcaaa ccgtcttcgg tgctcgaaac 7800

7741 ttggactaga ggtgtttcat gcaacggcca gccccagttt ggcagaagcc acgagctttg 7800

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7801 cgccttaaac tacagacagg tcccagccaa gtaggcggat caaaacctca aaaaggcggg 7860

7801 gcggaatttg atgtctgtcc agggtcggtt catccgccta gttttggagt ttttccgccc 7860

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7861 agccaatcaa aatgcagcat tatattttaa gctcaccgaa accggtaagt aaagactatg 7920

7861 tcggttagtt ttacgtcgta atataaaatt cgagtggctt tggccattca tttctgatac 7920

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

7921 tattttttcc cagtgaataa ttgtt..... .......... .......... .......... 7945

7921 ataaaaaagg gtcacttatt aacaa..... .......... .......... .......... 7945

.......... .......... .......... .......... .......... ..........

References

Reference number: [1] Reference positions: 1-7945 Cross-reference: MEDLINE; 83012974. Reference author: Chen E.Y., Howley P.M., Levinson A.D., Seeburg P.H.; Reference title: "The primary structure and genetic organization of the bovine Reference title: papillomavirus type 1 genome"; Reference location: Nature 299:529-534(1982).
Reference number: [2] Reference positions: 7120-7399 Cross-reference: MEDLINE; 87246504. Reference author: Baker C.C., Howley P.M.; Reference title: "Differential promoter utilization by the bovine papillomavirus in Reference title: transformed cells and productively infected wart tissues"; Reference location: EMBO J. 6:1027-1035(1987).