Sequence of Bacteriophage_fd_strain

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Sequence of Bacteriophage_fd_strain_478

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Sequence of Bacteriophage fd strain 478 : 6408 BP; 1578 A; 1295 C; 1325 G; 2210 T; 0 other;

.......... .......... .......... .......... .......... ..........

1 aacgctacta ccattagtag aattgatgcc accttttcag ctcgcgcccc aaatgaaaat 60

1 ttgcgatgat ggtaatcatc ttaactacgg tggaaaagtc gagcgcgggg tttactttta 60

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

61 atagctaaac aggttattga ccatttgcga aatgtatcta atggtcaaac taaatctact 120

61 tatcgatttg tccaataact ggtaaacgct ttacatagat taccagtttg atttagatga 120

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

121 cgttcgcaga attgggaatc aactgttaca tggaatgaaa cttccagaca ccgtacttta 180

121 gcaagcgtct taacccttag ttgacaatgt accttacttt gaaggtctgt ggcatgaaat 180

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

181 gttgcatatt taaaacatgt tgaactacag caccagattc agcaattaag ctctaagcca 240

181 caacgtataa attttgtaca acttgatgtc gtggtctaag tcgttaattc gagattcggt 240

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

241 tccgcaaaaa tgacctctta tcaaaaggag caattaaagg tactgtctaa tcctgacctg 300

241 aggcgttttt actggagaat agttttcctc gttaatttcc atgacagatt aggactggac 300

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

301 ttggaatttg cttccggtct ggttcgcttt gaggctcgaa ttgaaacgcg atatttgaag 360

301 aaccttaaac gaaggccaga ccaagcgaaa ctccgagctt aactttgcgc tataaacttc 360

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

361 tctttcgggc ttcctcttaa tctttttgat gcaattcgct ttgcttctga ctataataga 420

361 agaaagcccg aaggagaatt agaaaaacta cgttaagcga aacgaagact gatattatct 420

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

421 cagggtaaag acctgatttt tgatttatgg tcattctcgt tttctgaact gtttaaagca 480

421 gtcccatttc tggactaaaa actaaatacc agtaagagca aaagacttga caaatttcgt 480

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

481 tttgaggggg attcaatgaa tatttatgac gattccgcag tattggacgc tatccagtct 540

481 aaactccccc taagttactt ataaatactg ctaaggcgtc ataacctgcg ataggtcaga 540

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

541 aaacatttta caattacccc ctctggcaaa acttcctttg caaaagcctc tcgctatttt 600

541 tttgtaaaat gttaatgggg gagaccgttt tgaaggaaac gttttcggag agcgataaaa 600

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

601 ggtttctatc gtcgtctggt taatgagggt tatgatagtg ttgctcttac catgcctcgt 660

601 ccaaagatag cagcagacca attactccca atactatcac aacgagaatg gtacggagca 660

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

661 aattcctttt ggcgttatgt atctgcatta gttgagtgtg gtattcctaa atctcaattg 720

661 ttaaggaaaa ccgcaataca tagacgtaat caactcacac cataaggatt tagagttaac 720

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

721 atgaatcttt ccacctgtaa taatgttgtt ccgttagttc gttttattaa cgtagatttt 780

721 tacttagaaa ggtggacatt attacaacaa ggcaatcaag caaaataatt gcatctaaaa 780

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

781 tcctcccaac gtcctgactg gtataatgag ccagttctta aaatcgcata aggtaattca 840

781 aggagggttg caggactgac catattactc ggtcaagaat tttagcgtat tccattaagt 840

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

841 aaatgattaa agttgaaatt aaaccgtctc aagcgcaatt tactacccgt tctggtgttt 900

841 tttactaatt tcaactttaa tttggcagag ttcgcgttaa atgatgggca agaccacaaa 900

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

901 ctcgtcaggg caagccttat tcactgaatg agcagctttg ttacgttgat ttgggtaatg 960

901 gagcagtccc gttcggaata agtgacttac tcgtcgaaac aatgcaacta aacccattac 960

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

961 aatatccggt gcttgtcaag attactctcg acgaaggtca gccagcgtat gcgcctggtc 1020

961 ttataggcca cgaacagttc taatgagagc tgcttccagt cggtcgcata cgcggaccag 1020

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1021 tgtacaccgt gcatctgtcc tcgttcaaag ttggtcagtt cggttctctt atgattgacc 1080

1021 acatgtggca cgtagacagg agcaagtttc aaccagtcaa gccaagagaa tactaactgg 1080

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1081 gtctgcgcct cgttccggct aagtaacatg gagcaggtcg cggatttcga cacaatttat 1140

1081 cagacgcgga gcaaggccga ttcattgtac ctcgtccagc gcctaaagct gtgttaaata 1140

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1141 caggcgatga tacaaatctc cgttgtactt tgtttcgcgc ttggtataat cgctgggggt 1200

1141 gtccgctact atgtttagag gcaacatgaa acaaagcgcg aaccatatta gcgaccccca 1200

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1201 caaagatgag tgttttagtg tattctttcg cctctttcgt tttaggttgg tgccttcgta 1260

1201 gtttctactc acaaaatcac ataagaaagc ggagaaagca aaatccaacc acggaagcat 1260

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1261 gtggcattac gtattttacc cgtttaatgg aaacttcctc atgaaaaagt ctttagtcct 1320

1261 caccgtaatg cataaaatgg gcaaattacc tttgaaggag tactttttca gaaatcagga 1320

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1321 caaagcctcc gtagccgttg ctaccctcgt tccgatgctg tctttcgctg ctgagggtga 1380

1321 gtttcggagg catcggcaac gatgggagca aggctacgac agaaagcgac gactcccact 1380

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1381 cgatcccgca aaagcggcct ttgactccct gcaagcctca gcgaccgaat atatcggtta 1440

1381 gctagggcgt tttcgccgga aactgaggga cgttcggagt cgctggctta tatagccaat 1440

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1441 tgcgtgggcg atggttgttg tcattgtcgg cgcaactatc ggtatcaagc tgtttaagaa 1500

1441 acgcacccgc taccaacaac agtaacagcc gcgttgatag ccatagttcg acaaattctt 1500

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1501 attcacctcg aaagcaagct gataaaccga tacaattaaa ggctcctttt ggagcctttt 1560

1501 taagtggagc tttcgttcga ctatttggct atgttaattt ccgaggaaaa cctcggaaaa 1560

.......... .......... .......... . fd_terminator fd_terminator .

.......... .......... .......... .......... .......... ..........

1561 tttttggaga ttttcaacgt gaaaaaatta ttattcgcaa ttcctttagt tgttcctttc 1620

1561 aaaaacctct aaaagttgca cttttttaat aataagcgtt aaggaaatca acaaggaaag 1620

fd_terminator fd_terminator .. .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1621 tattctcact ccgctgaaac tgttgaaagt tgtttagcaa aacctcatac agaaaattca 1680

1621 ataagagtga ggcgactttg acaactttca acaaatcgtt ttggagtatg tcttttaagt 1680

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1681 tttactaacg tctggaaaga cgacaaaact ttagatcgtt acgctaacta tgagggctgt 1740

1681 aaatgattgc agacctttct gctgttttga aatctagcaa tgcgattgat actcccgaca 1740

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1741 ctgtggaatg ctacaggcgt tgtggtttgt actggtgacg aaactcagtg ttacggtaca 1800

1741 gacaccttac gatgtccgca acaccaaaca tgaccactgc tttgagtcac aatgccatgt 1800

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1801 tgggttccta ttgggcttgc tatccctgaa aatgagggtg gtggctctga gggtggcggt 1860

1801 acccaaggat aacccgaacg atagggactt ttactcccac caccgagact cccaccgcca 1860

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1861 tctgagggtg gcggttctga gggtggcggt actaaacctc ctgagtacgg tgatacacct 1920

1861 agactcccac cgccaagact cccaccgcca tgatttggag gactcatgcc actatgtgga 1920

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1921 attccgggct atacttatat caaccctctc gacggcactt atccgcctgg tactgagcaa 1980

1921 taaggcccga tatgaatata gttgggagag ctgccgtgaa taggcggacc atgactcgtt 1980

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

1981 aaccccgcta atcctaatcc ttctcttgag gagtctcagc ctcttaatac tttcatgttt 2040

1981 ttggggcgat taggattagg aagagaactc ctcagagtcg gagaattatg aaagtacaaa 2040

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

2041 cagaataata ggttccgaaa taggcagggt gcattaactg tttatacggg cactgttact 2100

2041 gtcttattat ccaaggcttt atccgtccca cgtaattgac aaatatgccc gtgacaatga 2100

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2101 caaggcactg accccgttaa aacttattac cagtacactc ctgtatcatc aaaagccatg 2160

2101 gttccgtgac tggggcaatt ttgaataatg gtcatgtgag gacatagtag ttttcggtac 2160

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2161 tatgacgctt actggaacgg taaattcaga gactgcgctt tccattctgg ctttaatgag 2220

2161 atactgcgaa tgaccttgcc atttaagtct ctgacgcgaa aggtaagacc gaaattactc 2220

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2221 gatccattcg tttgtgaata tcaaggccaa tcgtctgacc tgcctcaacc tcctgtcaat 2280

2221 ctaggtaagc aaacacttat agttccggtt agcagactgg acggagttgg aggacagtta 2280

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2281 gctggcggcg gctctggtgg tggttctggt ggcggctctg agggtggcgg ctctgagggt 2340

2281 cgaccgccgc cgagaccacc accaagacca ccgccgagac tcccaccgcc gagactccca 2340

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2341 ggcggttctg agggtggcgg ctctgagggt ggcggttccg gtggcggctc cggttccggt 2400

2341 ccgccaagac tcccaccgcc gagactccca ccgccaaggc caccgccgag gccaaggcca 2400

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2401 gattttgatt atgaaaaaat ggcaaacgct aataaggggg ctatgaccga aaatgccgat 2460

2401 ctaaaactaa tactttttta ccgtttgcga ttattccccc gatactggct tttacggcta 2460

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2461 gaaaacgcgc tacagtctga cgctaaaggc aaacttgatt ctgtcgctac tgattacggt 2520

2461 cttttgcgcg atgtcagact gcgatttccg tttgaactaa gacagcgatg actaatgcca 2520

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2521 gctgctatcg atggtttcat tggtgacgtt tccggccttg ctaatggtaa tggtgctact 2580

2521 cgacgatagc taccaaagta accactgcaa aggccggaac gattaccatt accacgatga 2580

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2581 ggtgattttg ctggctctaa ttcccaaatg gctcaagtcg gtgacggtga taattcacct 2640

2581 ccactaaaac gaccgagatt aagggtttac cgagttcagc cactgccact attaagtgga 2640

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2641 ttaatgaata atttccgtca atatttacct tctttgcctc agtcggttga atgtcgccct 2700

2641 aattacttat taaaggcagt tataaatgga agaaacggag tcagccaact tacagcggga 2700

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2701 tatgtctttg gcgctggtaa accatatgaa ttttctattg attgtgacaa aataaactta 2760

2701 atacagaaac cgcgaccatt tggtatactt aaaagataac taacactgtt ttatttgaat 2760

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2761 ttccgtggtg tctttgcgtt tcttttatat gttgccacct ttatgtatgt attttcgacg 2820

2761 aaggcaccac agaaacgcaa agaaaatata caacggtgga aatacataca taaaagctgc 2820

.......... ......... Orf frame 1 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

2821 tttgctaaca tactgcgtaa taaggagtct taatcatgcc agttcttttg ggtattccgt 2880

2821 aaacgattgt atgacgcatt attcctcaga attagtacgg tcaagaaaac ccataaggca 2880

......... Orf frame 1 ......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

2881 tattattgcg tttcctcggt ttccttctgg taactttgtt cggctatctg cttactttcc 2940

2881 ataataacgc aaaggagcca aaggaagacc attgaaacaa gccgatagac gaatgaaagg 2940

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

2941 ttaaaaaggg cttcggtaag atagctattg ctatttcatt gtttcttgct cttattattg 3000

2941 aatttttccc gaagccattc tatcgataac gataaagtaa caaagaacga gaataataac 3000

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3001 ggcttaactc aattcttgtg ggttatctct ctgatattag cgcacaatta ccctctgatt 3060

3001 ccgaattgag ttaagaacac ccaatagaga gactataatc gcgtgttaat gggagactaa 3060

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3061 ttgttcaggg cgttcagtta attctcccgt ctaatgcgct tccctgtttt tatgttattc 3120

3061 aacaagtccc gcaagtcaat taagagggca gattacgcga agggacaaaa atacaataag 3120

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3121 tctctgtaaa ggctgctatt ttcatttttg acgttaaaca aaaaatcgtt tcttatttgg 3180

3121 agagacattt ccgacgataa aagtaaaaac tgcaatttgt tttttagcaa agaataaacc 3180

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

3181 attgggataa ataaatatgg ctgtttattt tgtaactggc aaattaggct ctggaaagac 3240

3181 taaccctatt tatttatacc gacaaataaa acattgaccg tttaatccga gacctttctg 3240

.......... .......... ......... Orf frame 2 ......... ..........

.......... .......... .......... .......... .......... ..........

3241 gctcgttagc gttggtaaga ttcaggataa aattgtagct gggtgcaaaa tagcaactaa 3300

3241 cgagcaatcg caaccattct aagtcctatt ttaacatcga cccacgtttt atcgttgatt 3300

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3301 tcttgattta aggcttcaaa acctcccgca agtcgggagg ttcgctaaaa cgcctcgcgt 3360

3301 agaactaaat tccgaagttt tggagggcgt tcagccctcc aagcgatttt gcggagcgca 3360

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3361 tcttagaata ccggataagc cttctatttc tgatttgctt gctattggtc gtggtaatga 3420

3361 agaatcttat ggcctattcg gaagataaag actaaacgaa cgataaccag caccattact 3420

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3421 ttcctacgac gaaaataaaa acggtttgct tgttcttgat gaatgcggta cttggtttaa 3480

3421 aaggatgctg cttttatttt tgccaaacga acaagaacta cttacgccat gaaccaaatt 3480

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3481 tacccgttca tggaatgaca aggaaagaca gccgattatt gattggtttc ttcatgctcg 3540

3481 atgggcaagt accttactgt tcctttctgt cggctaataa ctaaccaaag aagtacgagc 3540

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3541 taaattggga tgggatatta tttttcttgt tcaggattta tctattgttg ataaacaggc 3600

3541 atttaaccct accctataat aaaaagaaca agtcctaaat agataacaac tatttgtccg 3600

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3601 gcgttctgca ttagctgaac acgttgttta ttgtcgccgt ctggacagaa ttactttacc 3660

3601 cgcaagacgt aatcgacttg tgcaacaaat aacagcggca gacctgtctt aatgaaatgg 3660

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3661 ctttgtcggc actttatatt ctcttgttac tggctcaaaa atgcctctgc ctaaattaca 3720

3661 gaaacagccg tgaaatataa gagaacaatg accgagtttt tacggagacg gatttaatgt 3720

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3721 tgttggtgtt gttaaatatg gtgattctca attaagccct actgttgagc gttggcttta 3780

3721 acaaccacaa caatttatac cactaagagt taattcggga tgacaactcg caaccgaaat 3780

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3781 tactggtaag aatttatata acgcatatga cactaaacag gctttttcca gtaattatga 3840

3781 atgaccattc ttaaatatat tgcgtatact gtgatttgtc cgaaaaaggt cattaatact 3840

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3841 ttcaggtgtt tattcatatt taacccctta tttatcacac ggtcggtatt tcaaaccatt 3900

3841 aagtccacaa ataagtataa attggggaat aaatagtgtg ccagccataa agtttggtaa 3900

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3901 aaatttaggt cagaagatga aattaactaa aatatatttg aaaaagtttt ctcgcgttct 3960

3901 tttaaatcca gtcttctact ttaattgatt ttatataaac tttttcaaaa gagcgcaaga 3960

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

3961 ttgtcttgcg ataggatttg catcagcatt tacatatagt tatataaccc aacctaagcc 4020

3961 aacagaacgc tatcctaaac gtagtcgtaa atgtatatca atatattggg ttggattcgg 4020

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4021 ggaggttaaa aaggtagtct ctcagaccta tgattttgat aaattcacta ttgactcttc 4080

4021 cctccaattt ttccatcaga gagtctggat actaaaacta tttaagtgat aactgagaag 4080

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4081 tcagcgtctt aatctaagct atcgctatgt tttcaaggat tctaagggaa aattaattaa 4140

4081 agtcgcagaa ttagattcga tagcgataca aaagttccta agattccctt ttaattaatt 4140

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4141 tagcgacgat ttacagaagc aaggttattc catcacatat attgatttat gtactgtttc 4200

4141 atcgctgcta aatgtcttcg ttccaataag gtagtgtata taactaaata catgacaaag 4200

.......... ......... Orf frame 2 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4201 aattaaaaaa ggtaattcaa atgaaattgt taaatgtaat taattttgtt ttcttgatgt 4260

4201 ttaatttttt ccattaagtt tactttaaca atttacatta attaaaacaa aagaactaca 4260

.......... ........ Orf frame 2 Orf frame 3 ........ ..........

.......... .......... .......... .......... .......... ..........

4261 ttgtttcatc atcttctttt gctcaagtaa ttgaaatgaa taattcgcct ctgcgcgatt 4320

4261 aacaaagtag tagaagaaaa cgagttcatt aactttactt attaagcgga gacgcgctaa 4320

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4321 tcgtgacttg gtattcaaag caaacaggtg aatctgttat tgtctcacct gatgttaaag 4380

4321 agcactgaac cataagtttc gtttgtccac ttagacaata acagagtgga ctacaatttc 4380

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4381 gtacagtgac tgtatattcc tctgacgtta agcctgaaaa tttacgcaat ttctttatct 4440

4381 catgtcactg acatataagg agactgcaat tcggactttt aaatgcgtta aagaaataga 4440

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4441 ctgttttacg tgctaataat tttgatatgg ttggctcaat tccttccata attcagaaat 4500

4441 gacaaaatgc acgattatta aaactatacc aaccgagtta aggaaggtat taagtcttta 4500

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4501 ataacccaaa tagtcaggat tatattgatg aattgccatc atctgatatt caggaatatg 4560

4501 tattgggttt atcagtccta atataactac ttaacggtag tagactataa gtccttatac 4560

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4561 atgataattc cgctccttct ggtggtttct ttgttccgca aaatgataat gttactcaaa 4620

4561 tactattaag gcgaggaaga ccaccaaaga aacaaggcgt tttactatta caatgagttt 4620

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4621 catttaaaat taataacgtt cgcgcaaagg atttaataag ggttgtagaa ttgtttgtta 4680

4621 gtaaatttta attattgcaa gcgcgtttcc taaattattc ccaacatctt aacaaacaat 4680

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4681 aatctaatac atctaaatcc tcaaatgtat tatctgttga tggttctaac ttattagtag 4740

4681 ttagattatg tagatttagg agtttacata atagacaact accaagattg aataatcatc 4740

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4741 ttagcgcccc taaagatatt ttagataacc ttccgcaatt tctttctact gttgatttgc 4800

4741 aatcgcgggg atttctataa aatctattgg aaggcgttaa agaaagatga caactaaacg 4800

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4801 caactgacca gatattgatt gaaggattaa ttttcgaggt tcagcaaggt gatgctttag 4860

4801 gttgactggt ctataactaa cttcctaatt aaaagctcca agtcgttcca ctacgaaatc 4860

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4861 atttttcctt tgctgctggc tctcagcgcg gcactgttgc tggtggtgtt aatactgacc 4920

4861 taaaaaggaa acgacgaccg agagtcgcgc cgtgacaacg accaccacaa ttatgactgg 4920

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4921 gtctaacctc tgttttatct tctgcgggtg gttcgttcgg tatttttaac ggcgatgttt 4980

4921 cagattggag acaaaataga agacgcccac caagcaagcc ataaaaattg ccgctacaaa 4980

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

4981 tagggctatc agttcgcgca ttaaagacta atagccattc aaaaatattg tctgtgcctc 5040

4981 atcccgatag tcaagcgcgt aatttctgat tatcggtaag tttttataac agacacggag 5040

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... MscI(5083) ..........

5041 gtattcttac gctttcaggt cagaagggtt ctatttctgt tggccagaat gtccctttta 5100

5041 cataagaatg cgaaagtcca gtcttcccaa gataaagaca accggtctta cagggaaaat 5100

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5101 ttactggtcg tgtaactggt gaatctgcca atgtaaataa tccatttcag acggttgagc 5160

5101 aatgaccagc acattgacca cttagacggt tacatttatt aggtaaagtc tgccaactcg 5160

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5161 gtcaaaatgt tggtatttct atgagtgttt ttcccgttgc aatggctggc ggtaatattg 5220

5161 cagttttaca accataaaga tactcacaaa aagggcaacg ttaccgaccg ccattataac 5220

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5221 ttttagatat aaccagtaag gccgatagtt tgagttcttc tactcaggca agtgatgtta 5280

5221 aaaatctata ttggtcattc cggctatcaa actcaagaag atgagtccgt tcactacaat 5280

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5281 ttactaatca aagaagtatt gcgacaacgg ttaatttgcg tgatggtcag actcttttgc 5340

5281 aatgattagt ttcttcataa cgctgttgcc aattaaacgc actaccagtc tgagaaaacg 5340

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5341 tcggtggcct cactgattac aaaaacactt ctcaagattc tggtgtgccg ttcctgtcta 5400

5341 agccaccgga gtgactaatg tttttgtgaa gagttctaag accacacggc aaggacagat 5400

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5401 aaatcccttt aatcggcctc ctgtttagct cccgttctga ttctaacgag gaaagcacgt 5460

5401 tttagggaaa ttagccggag gacaaatcga gggcaagact aagattgctc ctttcgtgca 5460

.......... ......... Orf frame 3 ......... .......... ..........

.......... .......... .......... .......... .......... ..........

5461 tgtacgtgct cgtcaaagca accatagtac gcgccctgta gcggcgcatt aagcgcggcg 5520

5461 acatgcacga gcagtttcgt tggtatcatg cgcgggacat cgccgcgtaa ttcgcgccgc 5520

.......... ......... Orf frame 3 ......... .......... f1_origin

.......... .......... .......... .......... .......... ..........

5521 ggtgtggtgg ttacgcgcag cgtgaccgct acacttgcca gcgccctagc gcccgctcct 5580

5521 ccacaccacc aatgcgcgtc gcactggcga tgtgaacggt cgcgggatcg cgggcgagga 5580

.......... .......... f1_origin .......... .......... ..........

.......... .......... .......... .......... .......... ..........

5581 ttcgctttct tcccttcctt tctcgccacg ttctccggct ttccccgtca agctctaaat 5640

5581 aagcgaaaga agggaaggaa agagcggtgc aagaggccga aaggggcagt tcgagattta 5640

.......... .......... f1_origin .......... .......... ..........

.......... .......... .......... .......... .......... ..........

5641 cgggggatcc ctttagggtt ccgatttagt gctttacggc acctcgacct ccaaaaactt 5700

5641 gccccctagg gaaatcccaa ggctaaatca cgaaatgccg tggagctgga ggtttttgaa 5700

.......... .......... f1_origin .......... .......... ..........

.......... .......... .......... .......... .......... ..........

5701 gatttgggtg atggttcacg tagtgggcca tcgccctgat agacggtttt tcgccctttg 5760

5701 ctaaacccac taccaagtgc atcacccggt agcgggacta tctgccaaaa agcgggaaac 5760

.......... .......... f1_origin .......... .......... ..........

.......... .......... .......... .......... .......... ..........

5761 acgttggagt ccacgttctt taatagtgga ctcttgttcc aaactggaac aacactcaca 5820

5761 tgcaacctca ggtgcaagaa attatcacct gagaacaagg tttgaccttg ttgtgagtgt 5820

.......... .......... f1_origin .......... .......... ..........

.......... .......... .......... .......... .......... ..........

5821 actaactcgg cctattcttt tgatttataa ggatttttgt cattttctgc ttactggtta 5880

5821 tgattgagcc ggataagaaa actaaatatt cctaaaaaca gtaaaagacg aatgaccaat 5880

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

5881 aaaaataagc tgatttaaca aatatttaac gcgaaattta acaaaacatt aacgtttaca 5940

5881 tttttattcg actaaattgt ttataaattg cgctttaaat tgttttgtaa ttgcaaatgt 5940

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

5941 atttaaatat ttgcttatac aatcatcctg tttttggggc ttttctgatt atcaaccggg 6000

5941 taaatttata aacgaatatg ttagtaggac aaaaaccccg aaaagactaa tagttggccc 6000

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

6001 gtacatatga ttgacatgct agttttacga ttaccgttca tcgattctct tgtttgctcc 6060

6001 catgtatact aactgtacga tcaaaatgct aatggcaagt agctaagaga acaaacgagg 6060

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

6061 agactttcag gtaatgacct gatagccttt gtagacctct caaaaatagc taccctctcc 6120

6061 tctgaaagtc cattactgga ctatcggaaa catctggaga gtttttatcg atgggagagg 6120

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

6121 ggcatgaatt tatcagctag aacggttgaa tatcatattg acggtgattt gactgtctcc 6180

6121 ccgtacttaa atagtcgatc ttgccaactt atagtataac tgccactaaa ctgacagagg 6180

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

6181 ggcctttctc acccgtttga atctttgcct actcattact ccggcattgc atttaaaata 6240

6181 ccggaaagag tgggcaaact tagaaacgga tgagtaatga ggccgtaacg taaattttat 6240

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

6241 tatgagggtt ctaaaaattt ttatccctgc gttgaaatta aggcttcacc agcaaaagta 6300

6241 atactcccaa gatttttaaa aatagggacg caactttaat tccgaagtgg tcgttttcat 6300

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

6301 ttacagggtc ataatgtttt tggtacaacc gatttagctt tatgctctga ggctttattg 6360

6301 aatgtcccag tattacaaaa accatgttgg ctaaatcgaa atacgagact ccgaaataac 6360

.......... .......... .......... .......... .......... ..........

.......... .......... .......... .......... .......... ..........

6361 cttaattttg ctaactctct gccttgcttg tacgatttat tggatgtt.. .......... 6408

6361 gaattaaaac gattgagaga cggaacgaac atgctaaata acctacaa.. .......... 6408

.......... .......... .......... .......... .......... ..........