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Sequence of V956_pLPS
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Sequence of V956 pLPS-3'ECFP - Acceptor
: 4879 BP; 1192 A; 1304 C; 1259 G; 1124 T; 0 other; |
| AseI(7) | .......... | .......... | .......... | .......... | .......... |
| 1 | tagttattaa | tagtaatcaa | ttacggggtc | attagttcat | agcccatata | tggagttccg | 60 |
| 1 | atcaataatt | atcattagtt | aatgccccag | taatcaagta | tcgggtatat | acctcaaggc | 60 |
| .......... | .......... | .... | CMV_immearly_promoter | .... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | cgttacataa | cttacggtaa | atggcccgcc | tggctgaccg | cccaacgacc | <
font color="#000000" style="font-size:10px" face="Courier">cccgcccatt | 120 |
| 61 | gcaatgtatt | gaatgccatt | taccgggcgg | accgactggc | gggttgctgg | gggcgggtaa | 120 |
| .......... | ... | CMV_immearly_promoter | CAG_enhancer | ... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | gacgtcaata | atgacgtatg | ttcccatagt | aacgccaata | gggactttcc |
attgacgtca | 180 |
| 121 | ctgcagttat | tactgcatac | aagggtatca | ttgcggttat | ccctgaaagg | taactgcagt | 180 |
| ........ | | CAG_enhancer CMV_immearly_promoter | | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | NdeI(234) |
| 181 | atgggtggag | tatttacggt | aaactgccca | cttggcagta | catcaagtgt |
atcatatgcc | 240 |
| 181 | tacccacctc | ataaatgcca | tttgacgggt | gaaccgtcat | gtagttcaca | tagtatacgg | 240 |
| ........ | | CAG_enhancer CMV_immearly_promoter | | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 241 | aagtacgccc | cctattgacg | tcaatgacgg | taaatggccc | gcctggcatt |
atgcccagta | 300 |
| 241 | ttcatgcggg | ggataactgc | agttactgcc | atttaccggg | cggaccgtaa | tacgggtcat | 300 |
| ........ | | CAG_enhancer CMV_immearly_promoter | | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | catgacctta | tgggactttc | ctacttggca | gtacatctac | gtattagtca |
tcgctattac | 360 |
| 301 | gtactggaat | accctgaaag | gatgaaccgt | catgtagatg | cataatcagt | agcgataatg | 360 |
| ........ | | CAG_enhancer CMV_immearly_promoter | | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | catggtgatg | cggttttggc | agtacatcaa | tgggcgtgga | tagcggtttg | actcacgggg | 420 |
| 361 | gtaccactac | gccaaaaccg | tcatgtagtt | acccgcacct | atcgccaaac | tgagtgcccc | 420 |
| .......... | .... | CMV_immearly_promoter | .... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | atttccaagt | ctccacccca | ttgacgtcaa | tgggagtttg | ttttggcacc | aaaatcaacg | 480 |
| 421 | taaaggttca | gaggtggggt | aactgcagtt | accctcaaac | aaaaccgtgg | ttttagttgc | 480 |
| .......... | .... | CMV_immearly_promoter | .... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | ggactttcca | aaatgtcgta | acaactccgc | cccattgacg | caaatgggcg | gtaggcgtgt | 540 |
| 481 | cctgaaaggt | tttacagcat | tgttgaggcg | gggtaactgc | gtttacccgc | catccgcaca | 540 |
| .......... | .... | CMV_immearly_promoter | . | CMV_fwd_primer | CMV_promoter |
| .......... | .......... | .......... | .......... | .......... | NheI(591) |
| 541 | acggtgggag | gtctatataa | gcagagctgg | tttagtgaac | cgtcagatcc | gctagcataa | 600 |
| 541 | tgccaccctc | cagatatatt | cgtctcgacc | aaatcacttg | gcagtctagg | cgatcgtatt | 600 |
| ... | CMV_immearly_promoter | CMV_promoter | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 601 | cttcgtatag | catacattat | acgaagttat | agatccaata | ttattgaagc | atttatcagg | 660 |
| 601 | gaagcatatc | gtatgtaata | tgcttcaata | tctaggttat | aataacttcg | taaatagtcc | 660 |
| .......... | loxP | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 661 | gttattgtct | catgagcgga | tacatatttg | aatgtattta | gaaaaataaa | caaatagggg | 720 |
| 661 | caataacaga | gtactcgcct | atgtataaac | ttacataaat | ctttttattt | gtttatcccc | 720 |
| ........ | AmpR_promoter | ........ | .......... | .......... | .......... |
| .......... | .......... | ........ | | XhoI(762) | SacI(769),HindIII(771) EcoRI(778) |
| 721 | ttccgcgcac | atttccccga | aaagtgccac | ctgacgtgga | tctcgagctc | aagcttcgaa | 780 |
| 721 | aaggcgcgtg | taaaggggct | tttcacggtg | gactgcacct | agagctcgag | ttcgaagctt | 780 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | AgeI(836) |
| 781 | ttcagggttt | ccttgacaat | atcatactta | tcctgtccct | tttttttcca | cagctaccgg | 840 |
| 781 | aagtcccaaa | ggaactgtta | tagtatgaat | aggacaggga | aaaaaaaggt | gtcgatggcc | 840 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | tgagcaaggg | cgaggagctg | ttcaccgggg | tggtgcccat | cctggtcgag | ctggacggcg | 900 |
| 841 | actcgttccc | gctcctcgac | aagtggcccc | accacgggta | ggaccagctc | gacctgccgc | 900 |
| .......... | .......... | ........ | ECFP | EGFP_N_primer | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | acgtaaacgg | ccacaagttc | agcgtgtccg | gcgagggcga | gggcgatgcc | acctacggca | 960 |
| 901 | tgcatttgcc | ggtgttcaag | tcgcacaggc | cgctcccgct | cccgctacgg | tggatgccgt | 960 |
| .......... | .......... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | agctgaccct | gaagttcatc | tgcaccaccg | gcaagctgcc | cgtgccctgg | cccaccctcg | 1020 |
| 961 | tcgactggga | cttcaagtag | acgtggtggc | cgttcgacgg | gcacgggacc | gggtgggagc | 1020 |
| .......... | .......... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1021 | tgaccaccct | gacctggggc | gtgcagtgct | tcagccgcta | ccccgaccac | atgaagcagc | 1080 |
| 1021 | actggtggga | ctggaccccg | cacgtcacga | agtcggcgat | ggggctggtg | tacttcgtcg | 1080 |
| .......... | .......... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1081 | acgacttctt | caagtccgcc | atgcccgaag | gctacgtcca | ggagcgcacc | atcttcttca | 1140 |
| 1081 | tgctgaagaa | gttcaggcgg | tacgggcttc | cgatgcaggt | cctcgcgtgg | tagaagaagt | 1140 |
| .......... | .......... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | aggacgacgg | caactacaag | acccgcgccg | aggtgaagtt | cgagggcgac | accctggtga | 1200 |
| 1141 | tcctgctgcc | gttgatgttc | tgggcgcggc | tccacttcaa | gctcccgctg | tgggaccact | 1200 |
| .......... | .......... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | accgcatcga | gctgaagggc | atcgacttca | aggaggacgg | caacatcctg | gggcacaagc | 1260 |
| 1201 | tggcgtagct | cgacttcccg | tagctgaagt | tcctcctgcc | gttgtaggac | cccgtgttcg | 1260 |
| .......... | .......... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1261 | tggagtacaa | ctacatcagc | cacaacgtct | atatcaccgc | cgacaagcag | aagaacggca | 1320 |
| 1261 | acctcatgtt | gatgtagtcg | gtgttgcaga | tatagtggcg | gctgttcgtc | ttcttgccgt | 1320 |
| .......... | .......... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1321 | tcaaggccaa | cttcaagatc | cgccacaaca | tcgaggacgg | cagcgtgcag | ctcgccgacc | 1380 |
| 1321 | agttccggtt | gaagttctag | gcggtgttgt | agctcctgcc | gtcgcacgtc | gagcggctgg | 1380 |
| .......... | .......... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1381 | actaccagca | gaacaccccc | atcggcgacg | gccccgtgct | gctgcccgac | aaccactacc | 1440 |
| 1381 | tgatggtcgt | cttgtggggg | tagccgctgc | cggggcacga | cgacgggctg | ttggtgatgg | 1440 |
| .......... | .......... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1441 | tgagcaccca | gtccgccctg | agcaaagacc | ccaacgagaa | gcgcgatcac | atggtcctgc | 1500 |
| 1441 | actcgtgggt | caggcgggac | tcgtttctgg | ggttgctctt | cgcgctagtg | taccaggacg | 1500 |
| .......... | .......... | ECFP | .......... | ........ | EGFP_C_primer |
| .......... | .......... | .......... | .......... | .......... | XbaI(1557) |
| 1501 | tggagttcgt | gaccgccgcc | gggatcactc | tcggcgtaga | cgagctgtac | aagtaatcta | 1560 |
| 1501 | acctcaagca | ctggcggcgg | ccctagtgag | agccgcatct | gctcgacatg | ttcattagat | 1560 |
| EGFP_C_primer | ...... | ECFP | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1561 | gatcataatc | agccatacca | catttgtaga | ggttttactt | gctttaaaaa | acctcccaca | 1620 |
| 1561 | ctagtattag | tcggtatggt | gtaaacatct | ccaaaatgaa | cgaaattttt | tggagggtgt | 1620 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | HpaI(1666) | .......... |
| 1621 | cctccccctg | aacctgaaac | ataaaatgaa | tgcaattgtt | gttgttaact | tgtttattgc | 1680 |
| 1621 | ggagggggac | ttggactttg | tattttactt | acgttaacaa | caacaattga | acaaataacg | 1680 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1681 | agcttataat | ggttacaaat | aaagcaatag | catcacaaat | ttcacaaata | aagcattttt | 1740 |
| 1681 | tcgaatatta | ccaatgttta | tttcgttatc | gtagtgttta | aagtgtttat | ttcgtaaaaa | 1740 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | ......... | AflII(1785) | ......... |
| 1741 | ttcactgcat | tctagttgtg | gtttgtccaa | actcatcaat | gtatcttaag | gcgtaaattg | 1800 |
| 1741 | aagtgacgta | agatcaacac | caaacaggtt | tgagtagtta | catagaattc | cgcatttaac | 1800 |
| .......... | ........ | EBV_rev_primer | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | taagcgttaa | tattttgtta | aaattcgcgt | taaatttttg | ttaaatcagc | tcatttttta | 1860 |
| 1801 | attcgcaatt | ataaaacaat | tttaagcgca | atttaaaaac | aatttagtcg | agtaaaaaat | 1860 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1861 | accaataggc | cgaaatcggc | aaaatccctt | ataaatcaaa | agaatagacc | gagatagggt | 1920 |
| 1861 | tggttatccg | gctttagccg | ttttagggaa | tatttagttt | tcttatctgg | ctctatccca | 1920 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | tgagtgttgt | tccagtttgg | aacaagagtc | cactattaaa | gaacgtggac | tccaacgtca | 1980 |
| 1921 | actcacaaca | aggtcaaacc | ttgttctcag | gtgataattt | cttgcacctg | aggttgcagt | 1980 |
| .......... | .......... | .......... | f1_origin | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | aagggcgaaa | aaccgtctat | cagggcgatg | gcccactacg | tgaaccatca | ccctaatcaa | 2040 |
| 1981 | ttcccgcttt | ttggcagata | gtcccgctac | cgggtgatgc | acttggtagt | gggattagtt | 2040 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | gttttttggg | gtcgaggtgc | cgtaaagcac | taaatcggaa | ccctaaaggg | agcccccgat | 2100 |
| 2041 | caaaaaaccc | cagctccacg | gcatttcgtg | atttagcctt | gggatttccc | tcgggggcta | 2100 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | ttagagcttg | acggggaaag | ccggcgaacg | tggcgagaaa | ggaagggaag | aaagcgaaag | 2160 |
| 2101 | aatctcgaac | tgcccctttc | ggccgcttgc | accgctcttt | ccttcccttc | tttcgctttc | 2160 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | gagcgggcgc | tagggcgctg | gcaagtgtag | cggtcacgct | gcgcgtaacc | accacacccg | 2220 |
| 2161 | ctcgcccgcg | atcccgcgac | cgttcacatc | gccagtgcga | cgcgcattgg | tggtgtgggc | 2220 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | ccgcgcttaa | tgcgccgcta | cagggcgcgt | caggtggcac | ttttcgggga | aatgtgcgcg | 2280 |
| 2221 | ggcgcgaatt | acgcggcgat | gtcccgcgca | gtccaccgtg | aaaagcccct | ttacacgcgc | 2280 |
| f1_origin | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | gaacccctat | ttgtttattt | ttctaaatac | attcaaatat | gtatccgctc | atgagacaat | 2340 |
| 2281 | cttggggata | aacaaataaa | aagatttatg | taagtttata | cataggcgag | tactctgtta | 2340 |
| .......... | .......... | .......... | ........ | AmpR_promoter | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | aaccctgata | aatgcttcaa | taatattgaa | aaaggaagag | tcctgaggcg | gaaagaacca | 2400 |
| 2341 | ttgggactat | ttacgaagtt | attataactt | tttccttctc | aggactccgc | ctttcttggt | 2400 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | gctgtggaat | gtgtgtcagt | tagggtgtgg | aaagtcccca | ggctccccag | caggcagaag | 2460 |
| 2401 | cgacacctta | cacacagtca | atcccacacc | tttcaggggt | ccgaggggtc | gtccgtcttc | 2460 |
| ........ | pBABE_3_primer | .... | SV40_enhancer | SV40_promoter | ...... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | tatgcaaagc | atgcatctca | attagtcagc | aaccaggtgt | ggaaagtccc | caggctcccc | 2520 |
| 2461 | atacgtttcg | tacgtagagt | taatcagtcg | ttggtccaca | cctttcaggg | gtccgagggg | 2520 |
| .......... | . | SV40_enhancer SV40_promoter | . | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2521 | agcaggcaga | agtatgcaaa | gcatgcatct | caattagtca | gcaaccatag | tcccgcccct | 2580 |
| 2521 | tcgtccgtct | tcatacgttt | cgtacgtaga | gttaatcagt | cgttggtatc | agggcgggga | 2580 |
| .......... | . | SV40_enhancer SV40_promoter | . | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | aactccgccc | atcccgcccc | taactccgcc | cagttccgcc | cattctccgc | cccatggctg | 2640 |
| 2581 | ttgaggcggg | tagggcgggg | attgaggcgg | gtcaaggcgg | gtaagaggcg | gggtaccgac | 2640 |
| .......... | | SV40_enhancer SV40_promoter | SV40_origin | | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | actaattttt | tttatttatg | cagaggccga | ggccgcctcg | gcctctgagc | tattccagaa | 2700 |
| 2641 | tgattaaaaa | aaataaatac | gtctccggct | ccggcggagc | cggagactcg | ataaggtctt | 2700 |
| SV40_origin | SV40_promoter SV40pro_F_primer | | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | gtagtgagga | ggcttttttg | gaggcctagg | cttttgcaaa | gatcgatcaa | gagacaggat | 2760 |
| 2701 | catcactcct | ccgaaaaaac | ctccggatcc | gaaaacgttt | ctagctagtt | ctctgtccta | 2760 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | EagI(2809) | .......... |
| 2761 | gaggatcgtt | tcgcatgatt | gaacaagatg | gattgcacgc | aggttctccg | gccgcttggg | 2820 |
| 2761 | ctcctagcaa | agcgtactaa | cttgttctac | ctaacgtgcg | tccaagaggc | cggcgaaccc | 2820 |
| .......... | .......... | ..... | Orf frame 3 Neomycin | ..... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2821 | tggagaggct | attcggctat | gactgggcac | aacagacaat | cggctgctct | gatgccgccg | 2880 |
| 2821 | acctctccga | taagccgata | ctgacccgtg | ttgtctgtta | gccgacgaga | ctacggcggc | 2880 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | NarI(2903) | .......... | .......... | .......... |
| 2881 | tgttccggct | gtcagcgcag | gggcgcccgg | ttctttttgt | caagaccgac | ctgtccggtg | 2940 |
| 2881 | acaaggccga | cagtcgcgtc | cccgcgggcc | aagaaaaaca | gttctggctg | gacaggccac | 2940 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | MscI(2985) | .......... |
| 2941 | ccctgaatga | actgcaagac | gaggcagcgc | ggctatcgtg | gctggccacg | acgggcgttc | 3000 |
| 2941 | gggacttact | tgacgttctg | ctccgtcgcg | ccgatagcac | cgaccggtgc | tgcccgcaag | 3000 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | cttgcgcagc | tgtgctcgac | gttgtcactg | aagcgggaag | ggactggctg | ctattgggcg | 3060 |
| 3001 | gaacgcgtcg | acacgagctg | caacagtgac | ttcgcccttc | cctgaccgac | gataacccgc | 3060 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | aagtgccggg | gcaggatctc | ctgtcatctc | accttgctcc | tgccgagaaa | gtatccatca | 3120 |
| 3061 | ttcacggccc | cgtcctagag | gacagtagag | tggaacgagg | acggctcttt | cataggtagt | 3120 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | tggctgatgc | aatgcggcgg | ctgcatacgc | ttgatccggc | tacctgccca | ttcgaccacc | 3180 |
| 3121 | accgactacg | ttacgccgcc | gacgtatgcg | aactaggccg | atggacgggt | aagctggtgg | 3180 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | aagcgaaaca | tcgcatcgag | cgagcacgta | ctcggatgga | agccggtctt | gtcgatcagg | 3240 |
| 3181 | ttcgctttgt | agcgtagctc | gctcgtgcat | gagcctacct | tcggccagaa | cagctagtcc | 3240 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | atgatctgga | cgaagagcat | caggggctcg | cgccagccga | actgttcgcc | aggctcaagg | 3300 |
| 3241 | tactagacct | gcttctcgta | gtccccgagc | gcggtcggct | tgacaagcgg | tccgagttcc | 3300 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | cgagcatgcc | cgacggcgag | gatctcgtcg | tgacccatgg | cgatgcctgc | ttgccgaata | 3360 |
| 3301 | gctcgtacgg | gctgccgctc | ctagagcagc | actgggtacc | gctacggacg | aacggcttat | 3360 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | tcatggtgga | aaatggccgc | ttttctggat | tcatcgactg | tggccggctg | ggtgtggcgg | 3420 |
| 3361 | agtaccacct | tttaccggcg | aaaagaccta | agtagctgac | accggccgac | ccacaccgcc | 3420 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | accgctatca | ggacatagcg | ttggctaccc | gtgatattgc | tgaagagctt | ggcggcgaat | 3480 |
| 3421 | tggcgatagt | cctgtatcgc | aaccgatggg | cactataacg | acttctcgaa | ccgccgctta | 3480 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | gggctgaccg | cttcctcgtg | ctttacggta | tcgccgctcc | cgattcgcag | cgcatcgcct | 3540 |
| 3481 | cccgactggc | gaaggagcac | gaaatgccat | agcggcgagg | gctaagcgtc | gcgtagcgga | 3540 |
| .......... | ..... | Orf frame 3 Neomycin | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | tctatcgcct | tcttgacgag | ttcttctgag | cgggactctg | gggttcgaaa | tgaccgacca | 3600 |
| 3541 | agatagcgga | agaactgctc | aagaagactc | gccctgagac | cccaagcttt | actggctggt | 3600 |
| ..... | Orf frame 3 Neomycin | ..... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | agcgacgccc | aacctgccat | cacgagattt | cgattccacc | gccgccttct | atgaaaggtt | 3660 |
| 3601 | tcgctgcggg | ttggacggta | gtgctctaaa | gctaaggtgg | cggcggaaga | tactttccaa | 3660 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | gggcttcgga | atcgttttcc | gggacgccgg | ctggatgatc | ctccagcgcg | gggatctcat | 3720 |
| 3661 | cccgaagcct | tagcaaaagg | ccctgcggcc | gacctactag | gaggtcgcgc | ccctagagta | 3720 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | gctggagttc | ttcgcccacc | ctagggggag | gctaactgaa | acacggaagg | agacaatacc | 3780 |
| 3721 | cgacctcaag | aagcgggtgg | gatccccctc | cgattgactt | tgtgccttcc | tctgttatgg | 3780 |
| .......... | .......... | .......... | ....... | TK_PA_terminator | ....... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | ggaaggaacc | cgcgctatga | cggcaataaa | aagacagaat | aaaacgcacg | gtgttgggtc | 3840 |
| 3781 | ccttccttgg | gcgcgatact | gccgttattt | ttctgtctta | ttttgcgtgc | cacaacccag | 3840 |
| .......... | ....... | TK_PA_terminator | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | gtttgttcat | aaacgcgggg | ttcggtccca | gggctggcac | tctgtcgata | ccccaccgag | 3900 |
| 3841 | caaacaagta | tttgcgcccc | aagccagggt | cccgaccgtg | agacagctat | ggggtggctc | 3900 |
| .......... | ....... | TK_PA_terminator | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | accccattgg | ggccaatacg | cccgcgtttc | ttccttttcc | ccaccccacc | ccccaagttc | 3960 |
| 3901 | tggggtaacc | ccggttatgc | gggcgcaaag | aaggaaaagg | ggtggggtgg | ggggttcaag | 3960 |
| .......... | ....... | TK_PA_terminator | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | gggtgaaggc | ccagggctcg | cagccaacgt | cggggcggca | ggccctgcca | tagcctcagg | 4020 |
| 3961 | cccacttccg | ggtcccgagc | gtcggttgca | gccccgccgt | ccgggacggt | atcggagtcc | 4020 |
| .......... | ....... | TK_PA_terminator | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4021 | ttactcatat | atactttaga | ttgatttaaa | acttcatttt | taatttaaaa | ggatctaggt | 4080 |
| 4021 | aatgagtata | tatgaaatct | aactaaattt | tgaagtaaaa | attaaatttt | cctagatcca | 4080 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | gaagatcctt | tttgataatc | tcatgaccaa | aatcccttaa | cgtgagtttt | cgttccactg | 4140 |
| 4081 | cttctaggaa | aaactattag | agtactggtt | ttagggaatt | gcactcaaaa | gcaaggtgac | 4140 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | agcgtcagac | cccgtagaaa | agatcaaagg | atcttcttga | gatccttttt | ttctgcgcgt | 4200 |
| 4141 | tcgcagtctg | gggcatcttt | tctagtttcc | tagaagaact | ctaggaaaaa | aagacgcgca | 4200 |
| .......... | .......... | ........ | pBR322_origin | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | aatctgctgc | ttgcaaacaa | aaaaaccacc | gctaccagcg | gtggtttgtt | tgccggatca | 4260 |
| 4201 | ttagacgacg | aacgtttgtt | tttttggtgg | cgatggtcgc | caccaaacaa | acggcctagt | 4260 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | agagctacca | actctttttc | cgaaggtaac | tggcttcagc | agagcgcaga | taccaaatac | 4320 |
| 4261 | tctcgatggt | tgagaaaaag | gcttccattg | accgaagtcg | tctcgcgtct | atggtttatg | 4320 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | tgtccttcta | gtgtagccgt | agttaggcca | ccacttcaag | aactctgtag | caccgcctac | 4380 |
| 4321 | acaggaagat | cacatcggca | tcaatccggt | ggtgaagttc | ttgagacatc | gtggcggatg | 4380 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | atacctcgct | ctgctaatcc | tgttaccagt | ggctgctgcc | agtggcgata | agtcgtgtct | 4440 |
| 4381 | tatggagcga | gacgattagg | acaatggtca | ccgacgacgg | tcaccgctat | tcagcacaga | 4440 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | taccgggttg | gactcaagac | gatagttacc | ggataaggcg | cagcggtcgg | gctgaacggg | 4500 |
| 4441 | atggcccaac | ctgagttctg | ctatcaatgg | cctattccgc | gtcgccagcc | cgacttgccc | 4500 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| ApaLI(4507) | ........ | .......... | .......... | .......... | .......... |
| 4501 | gggttcgtgc | acacagccca | gcttggagcg | aacgacctac | accgaactga | gatacctaca | 4560 |
| 4501 | cccaagcacg | tgtgtcgggt | cgaacctcgc | ttgctggatg | tggcttgact | ctatggatgt | 4560 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4561 | gcgtgagcta | tgagaaagcg | ccacgcttcc | cgaagggaga | aaggcggaca | ggtatccggt | 4620 |
| 4561 | cgcactcgat | actctttcgc | ggtgcgaagg | gcttccctct | ttccgcctgt | ccataggcca | 4620 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4621 | aagcggcagg | gtcggaacag | gagagcgcac | gagggagctt | ccagggggaa | acgcctggta | 4680 |
| 4621 | ttcgccgtcc | cagccttgtc | ctctcgcgtg | ctccctcgaa | ggtccccctt | tgcggaccat | 4680 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4681 | tctttatagt | cctgtcgggt | ttcgccacct | ctgacttgag | cgtcgatttt | tgtgatgctc | 4740 |
| 4681 | agaaatatca | ggacagccca | aagcggtgga | gactgaactc | gcagctaaaa | acactacgag | 4740 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4741 | gtcagggggg | cggagcctat | ggaaaaacgc | cagcaacgcg | gcctttttac | ggttcctggc | 4800 |
| 4741 | cagtcccccc | gcctcggata | cctttttgcg | gtcgttgcgc | cggaaaaatg | ccaaggaccg | 4800 |
| ........ | pBR322_origin | ........ | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4801 | cttttgctgg | ccttttgctc | acatgttctt | tcctgcgtta | tcccctgatt | ctgtggataa | 4860 |
| 4801 | gaaaacgacc | ggaaaacgag | tgtacaagaa | aggacgcaat | aggggactaa | gacacctatt | 4860 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4861 | ccgtattacc | gccatgcat. | .......... | .......... | .......... | .......... | 4879 |
| 4861 | ggcataatgg | cggtacgta. | .......... | .......... | .......... | .......... | 4879 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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