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  • BVTech Plasmid

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    Sequence of p3xFLAG_hph_loxP

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    Sequence of p3xFLAG::hph::loxP: 5044 BP; 1163 A; 1424 C; 1289 G; 1168 T; 0 other;

    ............................................................
    1agcgcccaatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggc60
    1tcgcgggttatgcgtttggcggagaggggcgcgcaaccggctaagtaattacgtcgaccg60
    ............................................................
    ............................................................
    61acgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaattaatgtgagttagc120
    61tgctgtccaaagggctgacctttcgcccgtcactcgcgttgcgttaattacactcaatcg120
    ............................................................
    ............................................................
    121tcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaa180
    121agtgagtaatccgtggggtccgaaatgtgaaatacgaaggccgagcatacaacacacctt180
    ............................. lac_promoter...................
    ............................................................
    181ttgtgagcgaataacaatttcacacaggaaacagctatgaccatgattacgccaagctat240
    181aacactcgcttattgttaaagtgtgtcctttgtcgatactggtactaatgcggttcgata240
    .......................... M13_reverse_primer................
    ........................ HindIII(277) KpnI(287) SacI(293),BamHI(295)
    241ttaggtgacactatagaatactcaagctatgcatcaagcttggtaccgagctcggatcca300
    241aatccactgtgatatcttatgagttcgatacgtagttcgaaccatggctcgagcctaggt300
    Sp6_primer..................................................
    ............................................................
    301taacttcgtatagcatacattatacgaagttatcccggtcggcatctactctattccttt360
    301attgaagcatatcgtatgtaatatgcttcaatagggccagccgtagatgagataaggaaa360
    .......... loxP.............................. ORF 2
    ............................................................
    361gccctcggacgagtgctggggcgtcggtttccactatcggcgagtacttctacacagcca420
    361cgggagcctgctcacgaccccgcagccaaaggtgatagccgctcatgaagatgtgtcggt420
    .................... ORF 2..............................
    .......... EagI(432)........................................
    421tcggtccagacggccgcgcttctgcgggcgatttgtgtacgcccgacagtcccggctccg480
    421agccaggtctgccggcgcgaagacgcccgctaaacacatgcgggctgtcagggccgaggc480
    .................... ORF 2..............................
    ............................................................
    481gatcggacgattgcgtcgcatcgaccctgcgcccaagctgcatcatcgaaattgccgtca540
    481ctagcctgctaacgcagcgtagctgggacgcgggttcgacgtagtagctttaacggcagt540
    .................... ORF 2..............................
    ............................................................
    541accaagctctgatagagttggtcaagaccaatgcggagcatatacgcccggagccgcggc600
    541tggttcgagactatctcaaccagttctggttacgcctcgtatatgcgggcctcggcgccg600
    .................... ORF 2..............................
    ............................................................
    601gatcctgcaagctccggatgcctccgctcgaagtagcgcgtctgctgctccatacaagcc660
    601ctaggacgttcgaggcctacggaggcgagcttcatcgcgcagacgacgaggtatgttcgg660
    .................... ORF 2 ORF 1....................
    ............................................................
    661aaccacggcctccagaagaagatgttggcgacctcgtattgggaatccccgaacatcgcc720
    661ttggtgccggaggtcttcttctacaaccgctggagcataacccttaggggcttgtagcgg720
    ................... ORF 2 ORF 1.............................
    ............................................................
    721tcgctccagtcaatgaccgctgttatgcggccattgtccgtcaggacattgttggagccg780
    721agcgaggtcagttactggcgacaatacgccggtaacaggcagtcctgtaacaacctcggc780
    ................... ORF 2 ORF 1.............................
    ............................................................
    781aaatccgcgtgcacgaggtgccggacttcggggcagtcctcggcccaaagcatcagctca840
    781tttaggcgcacgtgctccacggcctgaagccccgtcaggagccgggtttcgtagtcgagt840
    ................... ORF 2 ORF 1.............................
    ............................................................
    841tcgagagcctgcgcgacggacgcactgacggtgtcgtccatcacagtttgccagtgatac900
    841agctctcggacgcgctgcctgcgtgactgccacagcaggtagtgtcaaacggtcactatg900
    ................... ORF 2 ORF 1.............................
    ............................................................
    901acatggggatcagcaatcgcgcatatgaaatcacgccatgtagtgtattgaccgattcct960
    901tgtacccctagtcgttagcgcgtatactttagtgcggtacatcacataactggctaagga960
    ................... ORF 2 ORF 1.............................
    ........................................ EagI(1002)..........
    961tgcggtccgaatgggccgaacccgctcgtctggctaagatcggccgcagcgatcgcatcc1020
    961acgccaggcttacccggcttgggcgagcagaccgattctagccggcgtcgctagcgtagg1020
    ................... ORF 2 ORF 1.............................
    ............................................................
    1021atggcctccgcgaccggctgcagaacagcgggcagttcggtttcaggcaggtcttgcaac1080
    1021taccggaggcgctggccgacgtcttgtcgcccgtcaagccaaagtccgtccagaacgttg1080
    ................... ORF 2 ORF 1.............................
    ............................................................
    1081gtgacaccctgtgcacggcgggagatgcaataggtcaggctctcgctgaattccccaatg1140
    1081cactgtgggacacgtgccgccctctacgttatccagtccgagagcgacttaaggggttac1140
    ................... ORF 2 ORF 1.............................
    .................... EagI(1167)..............................
    1141tcaagcacttccggaatcgggagcgcggccgatgcaaagtgccgataaacataacgatct1200
    1141agttcgtgaaggccttagccctcgcgccggctacgtttcacggctatttgtattgctaga1200
    ................... ORF 2 ORF 1.............................
    ............................................................
    1201ttgtagaaaccatcggcgcagctatttacccgcaggacatatccacgccctcctacatcg1260
    1201aacatctttggtagccgcgtcgataaatgggcgtcctgtataggtgcgggaggatgtagc1260
    ................... ORF 2 ORF 1.............................
    ............................................................
    1261aagctgaaagcacgagattcttcgccctccgagagctgcatcaggtcggagacgctgtcg1320
    1261ttcgactttcgtgctctaagaagcgggaggctctcgacgtagtccagcctctgcgacagc1320
    ................... ORF 2 ORF 1.............................
    .................................................. ClaI(1379)
    1321aacttttcgatcagaaacttctcgacagacgtcgcggtgagttcaggctttttcatatcg1380
    1321ttgaaaagctagtctttgaagagctgtctgcagcgccactcaagtccgaaaaagtatagc1380
    ................... ORF 2 ORF 1.............................
    ............................................................
    1381atgcttgggtagaataggtaagtcagattgaatctgaaataaagggaggaagggcgaact1440
    1381tacgaacccatcttatccattcagtctaacttagactttatttccctccttcccgcttga1440
    ORF 1..................................................
    ............................................................
    1441taagaaggtatgaccgggtcgttcacttaccttgcttgacaaacgcaccaagttatcgtg1500
    1441attcttccatactggcccagcaagtgaatggaacgaactgtttgcgtggttcaatagcac1500
    ............................................................
    ............................................................
    1501caccaagcagcagatgataataatgtcctcgttcctgtctgctaataagagtcacacttc1560
    1501gtggttcgtcgtctactattattacaggagcaaggacagacgattattctcagtgtgaag1560
    ............................................................
    ............................................................
    1561gagcgccgccgctactgctacaagtggggctgatctgaccagttgcctaaatgaaccatc1620
    1561ctcgcggcggcgatgacgatgttcaccccgactagactggtcaacggatttacttggtag1620
    ............................................................
    ............................................................
    1621ttgtcaaacgacacaaattttgtgctcaccgcctggacgactaaaccaaaataggcattc1680
    1621aacagtttgctgtgtttaaaacacgagtggcggacctgctgatttggttttatccgtaag1680
    ............................................................
    ............................................................
    1681attgttgacctccactagctccagccaagcccaaaaagtgctccttcaatatcatcttct1740
    1681taacaactggaggtgatcgaggtcggttcgggtttttcacgaggaagttatagtagaaga1740
    ............................................................
    SalI(1742)....................... ClaI(1785),HindIII(1790)...
    1741gtcgactagaataacttcgtatagcatacattatacgaagttatcgataagcttgatatc1800
    1741cagctgatcttattgaagcatatcgtatgtaatatgcttcaatagctattcgaactatag1800
    .................... loxP..............................
    ............................................................
    1801gaattcaggttgtcttcccaacttgccccttgctccataccacccccctccaccccataa1860
    1801cttaagtccaacagaagggttgaacggggaacgaggtatggtggggggaggtggggtatt1860
    ............................................................
    ............................................................
    1861tattatagaaggacacctagtcagacaaaatgatgcaacttaattttattaggacaaggc1920
    1861ataatatcttcctgtggatcagtctgttttactacgttgaattaaaataatcctgttccg1920
    ............................................................
    ............................................................
    1921tggtgggcactggagtggcaacttccagggccaggagaggcactggggaggggtcacagg1980
    1921accacccgtgacctcaccgttgaaggtcccggtcctctccgtgacccctccccagtgtcc1980
    ............................................................
    ............................................................
    1981gatgccacccgggatcactacttgtcatcgtcatccttgtagtcgatgtcatgatcttta2040
    1981ctacggtgggccctagtgatgaacagtagcagtaggaacatcagctacagtactagaaat2040
    .................... EK..............................
    .............................. PacI(2073)....................
    2041taatcaccgtcatggtctttgtagtctttaattaagcctccgcctccgcctccgccgcct2100
    2041attagtggcagtaccagaaacatcagaaattaattcggaggcggaggcggaggcggcgga2100
    ............................................................
    XhoI(2106) XbaI(2118)........................................
    2101ccgcctcgagcatgcatctagagggcccaattcgccctattcgaagtcgtattacaattc2160
    2101ggcggagctcgtacgtagatctcccgggttaagcgggataagcttcagcataatgttaag2160
    ............................................................
    ............................................................
    2161actggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcg2220
    2161tgaccggcagcaaaatgttgcagcactgacccttttgggaccgcaatgggttgaattagc2220
    M13_forward20_primer M13_pUC_fwd_primer......................
    ................... PvuII(2248).............................
    2221ccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcg2280
    2221ggaacgtcgtgtagggggaaagcggtcgaccgcattatcgcttctccgggcgtggctagc2280
    ............................................................
    ............................................................
    2281cccttcccaacagttgcgcagcctatacgtacggcagtttaaggtttacacctataaaag2340
    2281gggaagggttgtcaacgcgtcggatatgcatgccgtcaaattccaaatgtggatattttc2340
    ............................................................
    ............................................................
    2341agagagccgttatcgtctgtttgtggatgtacagagtgatattattgacacgccggggcg2400
    2341tctctcggcaatagcagacaaacacctacatgtctcactataataactgtgcggccccgc2400
    ............................................................
    ............................................................
    2401acggatggtgatccccctggccagtgcacgtctgctgtcagataaagtctcccgtgaact2460
    2401tgcctaccactagggggaccggtcacgtgcagacgacagtctatttcagagggcacttga2460
    ............................................................
    ............................................................
    2461ttacccggtggtgcatatcggggatgaaagctggcgcatgatgaccaccgatatggccag2520
    2461aatgggccaccacgtatagcccctactttcgaccgcgtactactggtggctataccggtc2520
    ............................................................
    ............................................................
    2521tgtgccggtctccgttatcggggaagaagtggctgatctcagccaccgcgaaaatgacat2580
    2521acacggccagaggcaatagccccttcttcaccgactagagtcggtggcgcttttactgta2580
    ............................................................
    ............................................................
    2581caaaaacgccattaacctgatgttctggggaatataaatgtcaggcctgaatggcgaatg2640
    2581gtttttgcggtaattggactacaagaccccttatatttacagtccggacttaccgcttac2640
    ............................................................
    ............................................................
    2641gacgcgccctgtagcggcgcattaagcgcgcgggtgtggtggttacgcgcagcgtgaccg2700
    2641ctgcgcgggacatcgccgcgtaattcgcgcgcccacaccaccaatgcgcgtcgcactggc2700
    ............................................................
    ............................................................
    2701ctacacttgccagcgccctagcgcccgctcctttcgctttcttcccttcctttctcgcca2760
    2701gatgtgaacggtcgcgggatcgcgggcgaggaaagcgaaagaagggaaggaaagagcggt2760
    ............................................................
    ............................................................
    2761cgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgattta2820
    2761gcaagcggccgaaaggggcagttcgagatttagcccccgagggaaatcccaaggctaaat2820
    ............................................................
    ............................................................
    2821gagctttacggcacctcgaccgcaaaaaacttgatttgggtgatggttcacgtagtgggc2880
    2821ctcgaaatgccgtggagctggcgttttttgaactaaacccactaccaagtgcatcacccg2880
    ............................................................
    ............................................................
    2881catcgccctgatagacggtttttcgccctttgacgttggagtccacgttctttaatagtg2940
    2881gtagcgggactatctgccaaaaagcgggaaactgcaacctcaggtgcaagaaattatcac2940
    ............................................................
    ............................................................
    2941gactcttgttccaaactggaacaacactcaaccctatcgcggtctattcttttgatttat3000
    2941ctgagaacaaggtttgaccttgttgtgagttgggatagcgccagataagaaaactaaata3000
    ............................................................
    ............................................................
    3001aagggatgttgccgatttcggcctattggttaaaaaatgagctgatttaacaaaaatttt3060
    3001ttccctacaacggctaaagccggataaccaattttttactcgactaaattgtttttaaaa3060
    ............................................................
    ............................................................
    3061aacaaaattcagaagaactcgtcaagaaggcgatagaaggcgatgcgctgcgaatcggga3120
    3061ttgttttaagtcttcttgagcagttcttccgctatcttccgctacgcgacgcttagccct3120
    .............................. ORF 1....................
    ............................................................
    3121gcggcgataccgtaaagcacgaggaagcggtcagcccattcgccgccaagctcttcagca3180
    3121cgccgctatggcatttcgtgctccttcgccagtcgggtaagcggcggttcgagaagtcgt3180
    .................... ORF 1..............................
    ............................................................
    3181atatcacgggtagccaacgctatgtcctgatagcggtccgccacacccagccggccacag3240
    3181tatagtgcccatcggttgcgatacaggactatcgccaggcggtgtgggtcggccggtgtc3240
    .................... ORF 1..............................
    ............................................................
    3241tcgatgaatccagaaaagcggccattttccaccatgatattcggcaagcaggcatcgcca3300
    3241agctacttaggtcttttcgccggtaaaaggtggtactataagccgttcgtccgtagcggt3300
    .................... ORF 1..............................
    ............................................................
    3301tgggtcacgacgagatcctcgccgtcgggcatgctcgccttgagcctggcgaacagttcg3360
    3301acccagtgctgctctaggagcggcagcccgtacgagcggaactcggaccgcttgtcaagc3360
    .................... ORF 1..............................
    ............................................................
    3361gctggcgcgagcccctgatgctcttcgtccagatcatcctgatcgacaagaccggcttcc3420
    3361cgaccgcgctcggggactacgagaagcaggtctagtaggactagctgttctggccgaagg3420
    .................... ORF 1..............................
    ............................................................
    3421atccgagtacgtgctcgctcgatgcgatgtttcgcttggtggtcgaatgggcaggtagcc3480
    3421taggctcatgcacgagcgagctacgctacaaagcgaaccaccagcttacccgtccatcgg3480
    .................... ORF 1..............................
    ............................................................
    3481ggatcaagcgtatgcagccgccgcattgcatcagccatgatggatactttctcggcagga3540
    3481cctagttcgcatacgtcggcggcgtaacgtagtcggtactacctatgaaagagccgtcct3540
    .................... ORF 1..............................
    ............................................................
    3541gcaaggtgagatgacaggagatcctgccccggcacttcgcccaatagcagccagtccctt3600
    3541cgttccactctactgtcctctaggacggggccgtgaagcgggttatcgtcggtcagggaa3600
    .................... ORF 1..............................
    ................... PvuII(3629).............................
    3601cccgcttcagtgacaacgtcgagcacagctgcgcaaggaacgcccgtcgtggccagccac3660
    3601gggcgaagtcactgttgcagctcgtgtcgacgcgttccttgcgggcagcaccggtcggtg3660
    .................... ORF 1..............................
    ............................................................
    3661gatagccgcgctgcctcgtcttgcagttcattcagggcaccggacaggtcggtcttgaca3720
    3661ctatcggcgcgacggagcagaacgtcaagtaagtcccgtggcctgtccagccagaactgt3720
    .................... ORF 1..............................
    ............................................................
    3721aaaagaaccgggcgcccctgcgctgacagccggaacacggcggcatcagagcagccgatt3780
    3721ttttcttggcccgcggggacgcgactgtcggccttgtgccgccgtagtctcgtcggctaa3780
    .................... ORF 1..............................
    ............................................................
    3781gtctgttgtgcccagtcatagccgaatagcctctccacccaagcggccggagaacctgcg3840
    3781cagacaacacgggtcagtatcggcttatcggagaggtgggttcgccggcctcttggacgc3840
    .................... ORF 1..............................
    ............................................................
    3841tgcaatccatcttgttcaatcatgcgaaacgatcctcatcctgtctcttgatcagagctt3900
    3841acgttaggtagaacaagttagtacgctttgctaggagtaggacagagaactagtctcgaa3900
    .......... ORF 1........................................
    ............................................................
    3901gatcccctgcgccatcagatccttggcggcgagaaagccatccagtttactttgcagggc3960
    3901ctaggggacgcggtagtctaggaaccgccgctctttcggtaggtcaaatgaaacgtcccg3960
    ............................................... NEOKAN_promoter
    ................... PvuII(3989).............................
    3961ttcccaaccttaccagagggcgccccagctggcaattccggttcgcttgctgtccataaa4020
    3961aagggttggaatggtctcccgcggggtcgaccgttaaggccaagcgaacgacaggtattt4020
    ................. NEOKAN_promoter...........................
    ............................................................
    4021accgcccagtctagctatcgccatgtaagcccactgcaagctacctgctttctctttgcg4080
    4021tggcgggtcagatcgatagcggtacattcgggtgacgttcgatggacgaaagagaaacgc4080
    ............................................................
    ............................................................
    4081cttgcgttttcccttgtccagatagcccagtagctgacattcatccggggtcagcaccgt4140
    4081gaacgcaaaagggaacaggtctatcgggtcatcgactgtaagtaggccccagtcgtggca4140
    ............................................................
    ............................................................
    4141ttctgcggactggctttctacgtgaaaaggatctaggtgaagatcctttttgataatctc4200
    4141aagacgcctgaccgaaagatgcacttttcctagatccacttctaggaaaaactattagag4200
    ............................................................
    ............................................................
    4201atgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaag4260
    4201tactggttttagggaattgcactcaaaagcaaggtgactcgcagtctggggcatcttttc4260
    ............................................................
    ............................................................
    4261atcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaa4320
    4261tagtttcctagaagaactctaggaaaaaaagacgcgcattagacgacgaacgtttgtttt4320
    ............................................................
    ............................................................
    4321aaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccg4380
    4321tttggtggcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggc4380
    ............................................................
    ............................................................
    4381aaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtag4440
    4381ttccattgaccgaagtcgtctcgcgtctatggtttatgacaggaagatcacatcggcatc4440
    ............................................................
    ............................................................
    4441ttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctg4500
    4441aatccggtggtgaagttcttgagacatcgtggcggatgtatggagcgagacgattaggac4500
    ............................................................
    ............................................................
    4501ttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacga4560
    4501aatggtcaccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgct4560
    ............................................................
    ............................................................
    4561tagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagc4620
    4561atcaatggcctattccgcgtcgccagcccgacttgccccccaagcacgtgtgtcgggtcg4620
    ............................................................
    ............................................................
    4621ttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgcc4680
    4621aacctcgcttgctggatgtggcttgactctatggatgtcgcactcgatactctttcgcgg4680
    ............................................................
    ............................................................
    4681acgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacagga4740
    4681tgcgaagggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcct4740
    ............................................................
    ............................................................
    4741gagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggttt4800
    4741ctcgcgtgctccctcgaaggtccccctttgcggaccatagaaatatcaggacagcccaaa4800
    ............................................................
    ............................................................
    4801cgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatgg4860
    4801gcggtggagactgaactcgcagctaaaaacactacgagcagtccccccgcctcggatacc4860
    ............................................................
    ............................................................
    4861aaaaacgccagcaacgcggcctttttacggttcctgggcttttgctggccttttgctcac4920
    4861tttttgcggtcgttgcgccggaaaaatgccaaggacccgaaaacgaccggaaaacgagtg4920
    ............................................................
    ............................................................
    4921atgttctttcctgcgttatcccctgattctgtggataaccgtattaccgcctttgagtga4980
    4921tacaagaaaggacgcaataggggactaagacacctattggcataatggcggaaactcact4980
    ............................................................
    ............................................................
    4981gctgataccgctcgccgcagccgaacgaccgagcgcagcgagtcagtgagcgaggaagcg5040
    4981cgactatggcgagcggcgtcggcttgctggctcgcgtcgctcagtcactcgctccttcgc5040
    ............................................................
    ............................................................
    5041gaag........................................................5044
    5041cttc........................................................5044
    ............................................................

    References

    Reference number: [1] Reference positions: 1-5044 Reference author: Honda S., Selker E.U.; Reference title: "Tools for fungal proteomics: Multifunctional Neurospora vectors for gene Reference title: replacement, protein expression and protein purification"; Reference location: Genetics 0:0-0(2009).
    Reference number: [2] Reference positions: 1-5044 Reference author: Honda S., Selker E.U.; Reference title: ; Reference location: Submitted (11-NOV-2008) to the EMBL/GenBank/DDBJ databases. Reference location: Institute of Molecular Biology, University of Oregon, Eugene, OR 97403, USA



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