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  • BVTech Plasmid

    This sequnce graph is created using BVTech Plasmid, which is DNA sequence analysis and plasmid drawing software for Windows PCs.You can use it to plan your DNA cloning, draw high quality plasmid maps, analyse your DNA sequencing data, align sequences, and much more.

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    Sequence of pAW8_mCherry

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    Sequence of pAW8_mCherry: 10622 BP; 2948 A; 2352 C; 2291 G; 3031 T; 0 other;

    ............................................................
    1caaaaagttaggtgtaacagaaaatcatgaaactatgatttctaatttatatattggagg60
    1gtttttcaatccacattgtcttttagtactttgatactaaagattaaatatataacctcc60
    ............................................................
    ............................................................
    61attttctctaaaaaaaaaaatacaacaaataaaaaacactcaatgacctgaccatttgat120
    61taaaagagatttttttttttatgttgtttattttttgtgagttactggactggtaaacta120
    ............................................................
    ............................................................
    121ggagtttaagtcaataccttcttgaaccatttcccataatggtgaaagttccctcaagaa180
    121cctcaaattcagttatggaagaacttggtaaagggtattaccactttcaagggagttctt180
    ............................................................
    ............................................................
    181ttttactctgtcagaaacggccttaacgacgtagtcgatccggacgatggccaaccttcc240
    181aaaatgagacagtctttgccggaattgctgcatcagctaggcctgctaccggttggaagg240
    ............................................................
    ............................................................
    241aattcattaaatcgagtcctccatcagatgatttacaaggttttgcatagaatccctaag300
    241ttaagtaatttagctcaggaggtagtctactaaatgttccaaaacgtatcttagggattc300
    ............................................................
    ............................................................
    301taagagaagttgttagtgatttcttcaagtttactaaaatttacatacaaatggatgatc360
    301attctcttcaacaatcactaaagaagttcaaatgattttaaatgtatgtttacctactag360
    ............................................................
    ............................................................
    361tcttctccattgtttcctttcttcttgcaaacgcgttttacaaagagatgacatgctatt420
    361agaagaggtaacaaaggaaagaagaacgtttgcgcaaaatgtttctctactgtacgataa420
    ............................................................
    ............................................................
    421ttctgattatttttttctatagttttctattttgtacgtccttgggagtccgaaatgtaa480
    421aagactaataaaaaaagatatcaaaagataaaacatgcaggaaccctcaggctttacatt480
    ............................................................
    ............................................................
    481aatcggggtatggttagtagcggcagcgttcattatggtatataaaagataaaaagtagg540
    481ttagccccataccaatcatcgccgtcgcaagtaataccatatattttctatttttcatcc540
    ............................................................
    ............................................................
    541ggcaagcgagacagaatgggatacaagggcatcgtctataattatagctaaaaattgtat600
    541ccgttcgctctgtcttaccctatgttcccgtagcagatattaatatcgatttttaacata600
    ............................................................
    ............................................................
    601tttaatttgtattttttgtaattttatttctcattgttttacttaaaatgaatgcgaatt660
    601aaattaaacataaaaaacattaaaataaagagtaacaaaatgaattttacttacgcttaa660
    ............................................................
    ............................................................
    661agagaaaacttcaacgaaatgtcaaaataagctcagcaaaatatacaattttagggaaag720
    661tctcttttgaagttgctttacagttttattcgagtcgttttatatgttaaaatccctttc720
    ............................................................
    ............................................................
    721cgatcagcaacttattctccggtgtagattctttttcttcataaattccaacaatgtaac780
    721gctagtcgttgaataagaggccacatctaagaaaaagaagtatttaaggttgttacattg780
    ............................................................
    ............................................................
    781tgccaattgatttttctctagatgctaataaattgaaactaatgaatataataacacagg840
    781acggttaactaaaaagagatctacgattatttaactttgattacttatattattgtgtcc840
    ............................................................
    ............................................................
    841ttttgataaattgtaaactcttactcaaaaaaagaatgttaaaactaatttaaccttttt900
    841aaaactatttaacatttgagaatgagtttttttcttacaattttgattaaattggaaaaa900
    ............................................................
    ............................................................
    901ataaaggctcatggcgttaaagaggatagtaaaaattctacaattttttaatttaatgtc960
    901tatttccgagtaccgcaatttctcctatcatttttaagatgttaaaaaattaaattacag960
    ............................................................
    .................................................. ScaI(1014)
    961acaattgtcttgcgaatataattctattaattttcgctaactgctgttttagtactatta1020
    961tgttaacagaacgcttatattaagataattaaaagcgattgacgacaaaatcatgataat1020
    ............................................................
    ............................................................
    1021ctttcaatatgccttatatgcaactttaattcatgaagaatgcaatatttttgcaatctt1080
    1021gaaagttatacggaatatacgttgaaattaagtacttcttacgttataaaaacgttagaa1080
    ............................................................
    ............................................................
    1081tcttgtactgagcgctttttatcatttagtactcattatttaatttttcagtaaagggca1140
    1081agaacatgactcgcgaaaaatagtaaatcatgagtaataaattaaaaagtcatttcccgt1140
    ............................................................
    ............................................................
    1141ataaataaatttgtagaagatgcaatgtaatctcctctatccttttgctcatatgtttat1200
    1141tatttatttaaacatcttctacgttacattagaggagataggaaaacgagtatacaaata1200
    ............................................................
    ............................................................
    1201gagtatacctagtctagaaaggcttgtatttaaaatattattcaataaaaattcacaatt1260
    1201ctcatatggatcagatctttccgaacataaattttataataagttatttttaagtgttaa1260
    ............................................................
    ............................................................
    1261tttacgacatgtgctaccattcacttaacttcctgattataaaattggttcgtttatact1320
    1261aaatgctgtacacgatggtaagtgaattgaaggactaatattttaaccaagcaaatatga1320
    ............................................................
    ............................................................
    1321aattacttaagtacctttaactaaacaaaatgcctatatatatattaatttacaatgagt1380
    1321ttaatgaattcatggaaattgatttgttttacggatatatatataattaaatgttactca1380
    ............................................................
    ........................................ ClaI(1429)..........
    1381gtcagataagtcactatgtccgagtggttaaggagttagactcgccatcgatggtatggt1440
    1381cagtctattcagtgatacaggctcaccaattcctcaatctgagcggtagctaccatacca1440
    ............................................................
    ............................................................
    1441gcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaa1500
    1441cgtgagagtcatgttagacgagactacggcgtatcaattcggtcggggctgtgggcggtt1500
    ............................................................
    ............................................................
    1501cacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctg1560
    1501gtgggcgactgcgcgggactgcccgaacagacgagggccgtaggcgaatgtctgttcgac1560
    ............................................................
    ............................................................
    1561tgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcga1620
    1561actggcagaggccctcgacgtacacagtctccaaaagtggcagtagtggctttgcgcgct1620
    .................. pGEX_3_primer............................
    ............................................................
    1621gacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggttt1680
    1621ctgctttcccggagcactatgcggataaaaatatccaattacagtactattattaccaaa1680
    ............................................................
    ............................................................
    1681cttagacgtcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttt1740
    1681gaatctgcagtccaccgtgaaaagcccctttacacgcgccttggggataaacaaataaaa1740
    ............................................................
    ............................................................
    1741tctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgcttcaat1800
    1741agatttatgtaagtttatacataggcgagtactctgttattgggactatttacgaagtta1800
    .................. AmpR_promoter............................
    ............................................................
    1801aatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattccctttt1860
    1801ttataactttttccttctcatactcataagttgtaaaggcacagcgggaataagggaaaa1860
    ........................... Ampicillin ORF 3.................
    ............................................................
    1861ttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatg1920
    1861aacgccgtaaaacggaaggacaaaaacgagtgggtctttgcgaccactttcattttctac1920
    ................. Ampicillin ORF 3...........................
    ............................................................
    1921ctgaagatcagttgggtgcacgagtgggttacatcgaactggatctcaacagcggtaaga1980
    1921gacttctagtcaacccacgtgctcacccaatgtagcttgacctagagttgtcgccattct1980
    ................. Ampicillin ORF 3...........................
    ............................................................
    1981tccttgagagttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgc2040
    1981aggaactctcaaaagcggggcttcttgcaaaaggttactactcgtgaaaatttcaagacg2040
    ................. Ampicillin ORF 3...........................
    ............................................................
    2041tatgtggcgcggtattatcccgtattgacgccgggcaagagcaactcggtcgccgcatac2100
    2041atacaccgcgccataatagggcataactgcggcccgttctcgttgagccagcggcgtatg2100
    Ampicillin.......... ORF 3..............................
    .................... ScaI(2128)..............................
    2101actattctcagaatgacttggttgagtactcaccagtcacagaaaagcatcttacggatg2160
    2101tgataagagtcttactgaaccaactcatgagtggtcagtgtcttttcgtagaatgcctac2160
    .................... ORF 3..............................
    ............................................................
    2161gcatgacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggcca2220
    2161cgtactgtcattctcttaatacgtcacgacggtattggtactcactattgtgacgccggt2220
    .................... ORF 3..............................
    ............................................................
    2221acttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgg2280
    2221tgaatgaagactgttgctagcctcctggcttcctcgattggcgaaaaaacgtgttgtacc2280
    .................... ORF 3..............................
    ............................................................
    2281gggatcatgtaactcgccttgatcgttgggaaccggagctgaatgaagccataccaaacg2340
    2281ccctagtacattgagcggaactagcaacccttggcctcgacttacttcggtatggtttgc2340
    .................... ORF 3..............................
    ............................................................
    2341acgagcgtgacaccacgatgcctgtagcaatggcaacaacgttgcgcaaactattaactg2400
    2341tgctcgcactgtggtgctacggacatcgttaccgttgttgcaacgcgtttgataattgac2400
    .................... ORF 3..............................
    ............................................................
    2401gcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaag2460
    2401cgcttgatgaatgagatcgaagggccgttgttaattatctgacctacctccgcctatttc2460
    .................... ORF 3..............................
    ............................................................
    2461ttgcaggaccacttctgcgctcggcccttccggctggctggtttattgctgataaatctg2520
    2461aacgtcctggtgaagacgcgagccgggaaggccgaccgaccaaataacgactatttagac2520
    .................... ORF 3..............................
    ............................................................
    2521gagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagccct2580
    2521ctcggccactcgcacccagagcgccatagtaacgtcgtgaccccggtctaccattcggga2580
    .................... ORF 3..............................
    ............................................................
    2581cccgtatcgtagttatctacacgacggggagtcaggccactatggatgaacgaaatagac2640
    2581gggcatagcatcaatagatgtgctgcccctcagtccggtgatacctacttgctttatctg2640
    .................... ORF 3..............................
    ............................................................
    2641agatcgctgagataggtgcctcactgattaagcattggtaactgtcagaccaagtttact2700
    2641tctagcgactctatccacggagtgactaattcgtaaccattgacagtctggttcaaatga2700
    .................... ORF 3..............................
    ............................................................
    2701catatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaaga2760
    2701gtatatatgaaatctaactaaattttgaagtaaaaattaaattttcctagatccacttct2760
    ............................................................
    ............................................................
    2761tcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgt2820
    2761aggaaaaactattagagtactggttttagggaattgcactcaaaagcaaggtgactcgca2820
    ............................................................
    ............................................................
    2821cagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatct2880
    2821gtctggggcatcttttctagtttcctagaagaactctaggaaaaaaagacgcgcattaga2880
    .............................. pBR322_ori....................
    ............................................................
    2881gctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagc2940
    2881cgacgaacgtttgtttttttggtggcgatggtcgccaccaaacaaacggcctagttctcg2940
    .................... pBR322_ori..............................
    ............................................................
    2941taccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgttc3000
    2941atggttgagaaaaaggcttccattgaccgaagtcgtctcgcgtctatggtttatgacaag3000
    .................... pBR322_ori..............................
    ............................................................
    3001ttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacc3060
    3001aagatcacatcggcatcaatccggtggtgaagttcttgagacatcgtggcggatgtatgg3060
    .................... pBR322_ori..............................
    ............................................................
    3061tcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccg3120
    3061agcgagacgattaggacaatggtcaccgacgacggtcaccgctattcagcacagaatggc3120
    .................... pBR322_ori..............................
    ............................................................
    3121ggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggtt3180
    3121ccaacctgagttctgctatcaatggcctattccgcgtcgccagcccgacttgccccccaa3180
    .................... pBR322_ori..............................
    ............................................................
    3181cgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtg3240
    3181gcacgtgtgtcgggtcgaacctcgcttgctggatgtggcttgactctatggatgtcgcac3240
    .................... pBR322_ori..............................
    ............................................................
    3241agctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcg3300
    3241tcgatactctttcgcggtgcgaagggcttccctctttccgcctgtccataggccattcgc3300
    .................... pBR322_ori..............................
    ............................................................
    3301gcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatcttt3360
    3301cgtcccagccttgtcctctcgcgtgctccctcgaaggtccccctttgcggaccatagaaa3360
    .................... pBR322_ori..............................
    ............................................................
    3361atagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcag3420
    3361tatcaggacagcccaaagcggtggagactgaactcgcagctaaaaacactacgagcagtc3420
    .................... pBR322_ori..............................
    ............................................................
    3421gggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggcctttt3480
    3421cccccgcctcggatacctttttgcggtcgttgcgccggaaaaatgccaaggaccggaaaa3480
    .......... pBR322_ori........................................
    ............................................................
    3481gctggccttttgctcacatgttctttcctgcgttatcccctgattctgtggataaccgta3540
    3481cgaccggaaaacgagtgtacaagaaaggacgcaataggggactaagacacctattggcat3540
    ............................................................
    ............................................................
    3541ttaccgcctttgagtgagctgataccgctcgccgcagccgaacgaccgagcgcagcgagt3600
    3541aatggcggaaactcactcgactatggcgagcggcgtcggcttgctggctcgcgtcgctca3600
    ............................................................
    ............................................................
    3601cagtgagcgaggaagcggaagagcgcccaatacgcaaaccgcctctccccgcgcgttggc3660
    3601gtcactcgctccttcgccttctcgcgggttatgcgtttggcggagaggggcgcgcaaccg3660
    ............................................................
    ............................................................
    3661cgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgca3720
    3661gctaagtaattacgtcgaccgtgctgtccaaagggctgacctttcgcccgtcactcgcgt3720
    ............................................................
    ............................................................
    3721acgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttatgcttc3780
    3721tgcgttaattacactcaatcgagtgagtaatccgtggggtccgaaatgtgaaatacgaag3780
    ................................................. lac_promoter
    ............................................................
    3781cggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatg3840
    3781gccgagcatacaacacaccttaacactcgcctattgttaaagtgtgtcctttgtcgatac3840
    lac_promoter.............. M13_pUC_rev_primer.. M13_reverse_primer
    ........ HindIII(3856)......................................
    3841accatgattacgccaagcttgcatggcggccgcataacttcgtatagcatacattatacg3900
    3841tggtactaatgcggttcgaacgtaccgccggcgtattgaagcatatcgtatgtaatatgc3900
    .................... ORF 1.......... loxP..........
    ............................................................
    3901aagttatgcatgcttatggtgagcaagggcgaggaggataacatggccatcatcaaggag3960
    3901ttcaatacgtacgaataccactcgttcccgctcctcctattgtaccggtagtagttcctc3960
    .................... ORF 1..............................
    ............................................................
    3961ttcatgcgcttcaaggtgcacatggagggctccgtgaacggccacgagttcgagatcgag4020
    3961aagtacgcgaagttccacgtgtacctcccgaggcacttgccggtgctcaagctctagctc4020
    .................... ORF 1..............................
    ............................................................
    4021ggcgagggcgagggccgcccctacgagggcacccagaccgccaagctgaaggtgaccaag4080
    4021ccgctcccgctcccggcggggatgctcccgtgggtctggcggttcgacttccactggttc4080
    .................... ORF 1..............................
    ............................................................
    4081ggtggccccctgcccttcgcctgggacatcctgtcccctcagttcatgtacggctccaag4140
    4081ccaccgggggacgggaagcggaccctgtaggacaggggagtcaagtacatgccgaggttc4140
    .................... ORF 1..............................
    ............................................................
    4141gcctacgtgaagcaccccgccgacatccccgactacttgaagctgtccttccccgagggc4200
    4141cggatgcacttcgtggggcggctgtaggggctgatgaacttcgacaggaaggggctcccg4200
    .................... ORF 1..............................
    ............................................................
    4201ttcaagtgggagcgcgtgatgaacttcgaggacggcggcgtggtgaccgtgacccaggac4260
    4201aagttcaccctcgcgcactacttgaagctcctgccgccgcaccactggcactgggtcctg4260
    .................... ORF 1..............................
    ............................................................
    4261tcctccctgcaggacggcgagttcatctacaaggtgaagctgcgcggcaccaacttcccc4320
    4261aggagggacgtcctgccgctcaagtagatgttccacttcgacgcgccgtggttgaagggg4320
    .................... ORF 1..............................
    .................... NcoI(4350)..............................
    4321tccgacggccccgtaatgcagaagaagaccatgggctgggaggcctcctccgagcggatg4380
    4321aggctgccggggcattacgtcttcttctggtacccgaccctccggaggaggctcgcctac4380
    .................... ORF 1..............................
    ............................................................
    4381taccccgaggacggcgccctgaagggcgagatcaagcagaggctgaagctgaaggacggc4440
    4381atggggctcctgccgcgggacttcccgctctagttcgtctccgacttcgacttcctgccg4440
    .................... ORF 1..............................
    ............................................................
    4441ggccactacgacgctgaggtcaagaccacctacaaggccaagaagcccgtgcagctgccc4500
    4441ccggtgatgctgcgactccagttctggtggatgttccggttcttcgggcacgtcgacggg4500
    .................... ORF 1..............................
    ............................................................
    4501ggcgcctacaacgtcaacatcaagttggacatcacctcccacaacgaggactacaccatc4560
    4501ccgcggatgttgcagttgtagttcaacctgtagtggagggtgttgctcctgatgtggtag4560
    .................... ORF 1..............................
    ............................................................
    4561gtggaacagtacgaacgcgccgagggccgccactccaccggcggcatggacgagctgtac4620
    4561caccttgtcatgcttgcgcggctcccggcggtgaggtggccgccgtacctgctcgacatg4620
    .................... ORF 1..............................
    ............................................................
    4621aagtaaggcgcgccacttctaaataagcgaatttcttatgatttatgatttttattatta4680
    4621ttcattccgcgcggtgaagatttattcgcttaaagaatactaaatactaaaaataataat4680
    ............................................................
    ............................................................
    4681aataagttataaaaaaaataagtgtatacaaattttaaagtgactcttaggttttaaaac4740
    4681ttattcaatattttttttattcacatatgtttaaaatttcactgagaatccaaaattttg4740
    .......................... pHybLex_rev_primer................
    ............................................................
    4741gaaaattcttattcttgagtaactctttcctgtaggtcaggttgctttctcaggtatagt4800
    4741cttttaagaataagaactcattgagaaaggacatccagtccaacgaaagagtccatatca4800
    ............................................................
    ............................................................
    4801atgaggtcgctcttattgaccacacctctaccggcagatccgctagggataacagggtaa4860
    4801tactccagcgagaataactggtgtggagatggccgtctaggcgatccctattgtcccatt4860
    ............................................................
    ............................................................
    4861tatagatctgtttagcttgcctcgtccccgccgggtcacccggccagcgacatggaggcc4920
    4861atatctagacaaatcgaacggagcaggggcggcccagtgggccggtcgctgtacctccgg4920
    ............................................................
    ............................................................
    4921cagaataccctccttgacagtcttgacgtgcgcagctcaggggcatgatgtgactgtcgc4980
    4921gtcttatgggaggaactgtcagaactgcacgcgtcgagtccccgtactacactgacagcg4980
    ............................................................
    ............................................................
    4981ccgtacatttagcccatacatccccatgtataatcatttgcatccatacattttgatggc5040
    4981ggcatgtaaatcgggtatgtaggggtacatattagtaaacgtaggtatgtaaaactaccg5040
    ............................................................
    ............................................................
    5041cgcacggcgcgaagcaaaaattacggctcctcgctgcagacctgcgagcagggaaacgct5100
    5041gcgtgccgcgcttcgtttttaatgccgaggagcgacgtctggacgctcgtccctttgcga5100
    ............................................................
    .......... MluI(5112)........................................
    5101cccctcacagacgcgttgaattgtccccacgccgcgcccctgtagagaaatataaaaggt5160
    5101ggggagtgtctgcgcaacttaacaggggtgcggcgcggggacatctctttatattttcca5160
    ............................................................
    ............................................................
    5161taggatttgccactgaggttcttctttcatatacttccttttaaaatcttgctaggatac5220
    5161atcctaaacggtgactccaagaagaaagtatatgaaggaaaattttagaacgatcctatg5220
    ............................................................
    ............................................................
    5221agttctcacatcacatccgaacataaacaaccatgggtaaggaaaagactcacgtttcga5280
    5221tcaagagtgtagtgtaggcttgtatttgttggtacccattccttttctgagtgcaaagct5280
    ........................................ kanR..........
    ............................................................
    5281ggccgcgattaaattccaacatggatgctgatttatatgggtataaatgggctcgcgata5340
    5281ccggcgctaatttaaggttgtacctacgactaaatatacccatatttacccgagcgctat5340
    .................... kanR..............................
    ............................................................
    5341atgtcgggcaatcaggtgcgacaatctatcgattgtatgggaagcccgatgcgccagagt5400
    5341tacagcccgttagtccacgctgttagatagctaacatacccttcgggctacgcggtctca5400
    .................... kanR..............................
    ............................................................
    5401tgtttctgaaacatggcaaaggtagcgttgccaatgatgttacagatgagatggtcagac5460
    5401acaaagactttgtaccgtttccatcgcaacggttactacaatgtctactctaccagtctg5460
    .................... kanR..............................
    ............................................................
    5461taaactggctgacggaatttatgcctcttccgaccatcaagcattttatccgtactcctg5520
    5461atttgaccgactgccttaaatacggagaaggctggtagttcgtaaaataggcatgaggac5520
    .................... kanR..............................
    ............................................................
    5521atgatgcatggttactcaccactgcgatccccggcaaaacagcattccaggtattagaag5580
    5521tactacgtaccaatgagtggtgacgctaggggccgttttgtcgtaaggtccataatcttc5580
    .................... kanR..............................
    ............................................................
    5581aatatcctgattcaggtgaaaatattgttgatgcgctggcagtgttcctgcgccggttgc5640
    5581ttataggactaagtccacttttataacaactacgcgaccgtcacaaggacgcggccaacg5640
    .................... kanR..............................
    ............................................................
    5641attcgattcctgtttgtaattgtccttttaacagcgatcgcgtatttcgtctcgctcagg5700
    5641taagctaaggacaaacattaacaggaaaattgtcgctagcgcataaagcagagcgagtcc5700
    .................... kanR..............................
    ............................................................
    5701cgcaatcacgaatgaataacggtttggttgatgcgagtgattttgatgacgagcgtaatg5760
    5701gcgttagtgcttacttattgccaaaccaactacgctcactaaaactactgctcgcattac5760
    .................... kanR..............................
    ............................ HindIII(5797)..................
    5761gctggcctgttgaacaagtctggaaagaaatgcataagcttttgccattctcaccggatt5820
    5761cgaccggacaacttgttcagacctttctttacgtattcgaaaacggtaagagtggcctaa5820
    .................... kanR..............................
    ............................................................
    5821cagtcgtcactcatggtgatttctcacttgataaccttatttttgacgaggggaaattaa5880
    5821gtcagcagtgagtaccactaaagagtgaactattggaataaaaactgctcccctttaatt5880
    .................... kanR..............................
    ............................................................
    5881taggttgtattgatgttggacgagtcggaatcgcagaccgataccaggatcttgccatcc5940
    5881atccaacataactacaacctgctcagccttagcgtctggctatggtcctagaacggtagg5940
    .................... kanR..............................
    ............................................................
    5941tatggaactgcctcggtgagttttctccttcattacagaaacggctttttcaaaaatatg6000
    5941ataccttgacggagccactcaaaagaggaagtaatgtctttgccgaaaaagtttttatac6000
    .................... kanR..............................
    ............................................................
    6001gtattgataatcctgatatgaataaattgcagtttcatttgatgctcgatgagtttttct6060
    6001cataactattaggactatacttatttaacgtcaaagtaaactacgagctactcaaaaaga6060
    .................... kanR..............................
    ............................................................
    6061aatcagtactgacaataaaaagattcttgttttcaagaacttgtcatttgtatagttttt6120
    6061ttagtcatgactgttatttttctaagaacaaaagttcttgaacagtaaacatatcaaaaa6120
    ............................................................
    ............................................................
    6121ttatattgtagttgttctattttaatcaaatgttagcgtgatttatattttttttcgcct6180
    6121aatataacatcaacaagataaaattagtttacaatcgcactaaatataaaaaaaagcgga6180
    ............................................................
    ............................................................
    6181cgacatcatctgcccagatgcgaagttaagtgcgcagaaagtaatatcatgcgtcaatcg6240
    6181gctgtagtagacgggtctacgcttcaattcacgcgtctttcattatagtacgcagttagc6240
    ............................................................
    ............................................................
    6241tatgtgaatgctggtcgctatactgctgtcgattcgatactaacgccgccatccagtcga6300
    6241atacacttacgaccagcgatatgacgacagctaagctatgattgcggcggtaggtcagct6300
    ............................................................
    SpeI(6305)........................ NotI(6346),EagI(6346)....
    6301cgaactagtataacttcgtatatggtattatatacgaagttatgcggccgcgcgaattca6360
    6301gcttgatcatattgaagcatataccataatatatgcttcaatacgccggcgcgcttaagt6360
    ............................................................
    ............................................................
    6361ctggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgc6420
    6361gaccggcagcaaaatgttgcagcactgacccttttgggaccgcaatgggttgaattagcg6420
    M13_forward20_primer M13_pUC_fwd_primer......................
    ............................................................
    6421cttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgc6480
    6421gaacgtcgtgtagggggaaagcggtcgaccgcattatcgcttctccgggcgtggctagcg6480
    ............................................................
    ............................................................
    6481ccttcccaacagttgcgcagcctgaatggcgaatggcgcctgatgcggtattttctcctt6540
    6481ggaagggttgtcaacgcgtcggacttaccgcttaccgcggactacgccataaaagaggaa6540
    ............................................................
    ............................................................
    6541acgcatctgtgcggtatttcacaccgcataccatcgtccggatcaatgaagtagatgagt6600
    6541tgcgtagacacgccataaagtgtggcgtatggtagcaggcctagttacttcatctactca6600
    ............................................................
    ............................................................
    6601ttactacctgtatatacttttttttttgtcaaagtcacttttatggcatttccatgttga6660
    6601aatgatggacatatatgaaaaaaaaaacagtttcagtgaaaataccgtaaaggtacaact6660
    ............................................................
    ............................................................
    6661aggattagccacagcactaaattttcagcgtatgattgcttttaaatatttaattttcat6720
    6661tcctaatcggtgtcgtgatttaaaagtcgcatactaacgaaaatttataaattaaaagta6720
    ............................................................
    .......... PacI(6732)........................................
    6721cgttttttaattaatattcaaaacgatttaatgccttctacatctgaagtcaagctcata6780
    6721gcaaaaaattaattataagttttgctaaattacggaagatgtagacttcagttcgagtat6780
    ............................................................
    ............................................................
    6781gactcgggttgggtagctaaaactacatctaacacgaaggggtatagccttcttaaagta6840
    6781ctgagcccaacccatcgattttgatgtagattgtgcttccccatatcggaagaatttcat6840
    ............................................................
    ............................................................
    6841tactcatgtataaacgttttgggttcatatttttgggccacgtggtttataaaaattctt6900
    6841atgagtacatatttgcaaaacccaagtataaaaacccggtgcaccaaatatttttaagaa6900
    ............................................................
    ............................................................
    6901aactacaccactcggtatcccgcacccgtctacgtttctacgatttcgagctaatattga6960
    6901ttgatgtggtgagccatagggcgtgggcagatgcaaagatgctaaagctcgattataact6960
    ............................................................
    ............................................................
    6961gtaaagtgattagcaaaaaaaataaaagtactcgttgtcggagatcaagaatttttctat7020
    6961catttcactaatcgttttttttattttcatgagcaacagcctctagttcttaaaaagata7020
    ............................................................
    ............................................................
    7021tatctcatctaaaccactttctaaaagcgaaaaacaaaatcgtaatatgcagcttgaatg7080
    7021atagagtagatttggtgaaagattttcgctttttgttttagcattatacgtcgaacttac7080
    ............................................................
    ............................................................
    7081ggcttccatagtttgaaagaaaaaccctagcagtactggcaagggagacattccttttac7140
    7081ccgaaggtatcaaactttctttttgggatcgtcatgaccgttccctctgtaaggaaaatg7140
    ............................................................
    ............................................................
    7141ctggctaatcgccatcttccagcaggcgcaccattgcccctgtttcactatccaggttac7200
    7141gaccgattagcggtagaaggtcgtccgcgtggtaacggggacaaagtgataggtccaatg7200
    .............................. ORF 1....................
    ............................................................
    7201ggatatagttcatgacaatatttacattggtccagccaccagcttgcatgatctccggta7260
    7201cctatatcaagtactgttataaatgtaaccaggtcggtggtcgaacgtactagaggccat7260
    .................... ORF 1..............................
    ............................................................
    7261ttgaaactccagcgcgggccatatctcgcgcggctccgacacgggcactgtgtccagacc7320
    7261aactttgaggtcgcgcccggtatagagcgcgccgaggctgtgcccgtgacacaggtctgg7320
    .................... ORF 1..............................
    ............................................................
    7321aggccaggtatctctgaccagagtcatccttagcgccgtaaatcaatcgatgagttgctt7380
    7321tccggtccatagagactggtctcagtaggaatcgcggcatttagttagctactcaacgaa7380
    .................... ORF 1..............................
    ............................................................
    7381caaaaatcccttccagggcgcgagttgatagctggctggtggcagatggcgcggcaacac7440
    7381gtttttagggaaggtcccgcgctcaactatcgaccgaccaccgtctaccgcgccgttgtg7440
    .................... ORF 1..............................
    ............................................................
    7441cattttttctgacccggcaaaacaggtagttattcggatcatcagctacaccagagacgg7500
    7441gtaaaaaagactgggccgttttgtccatcaataagcctagtagtcgatgtggtctctgcc7500
    .................... ORF 1..............................
    ............................................................
    7501aaatccatcgctcgaccagtttagttacccccaggctaagtgccttctctacacctgcgg7560
    7501tttaggtagcgagctggtcaaatcaatgggggtccgattcacggaagagatgtggacgcc7560
    .................... ORF 1..............................
    ............................................................
    7561tgctaaccagcgttttcgttctgccaatatggattaacattctcccaccgtcagtacgtg7620
    7561acgattggtcgcaaaagcaagacggttatacctaattgtaagagggtggcagtcatgcac7620
    .................... ORF 1..............................
    EcoRV(7625)................................................
    7621agatatctttaaccctgatcctggcaatttcggctatacgtaacagggtgttataagcaa7680
    7621tctatagaaattgggactaggaccgttaaagccgatatgcattgtcccacaatattcgtt7680
    .................... ORF 1..............................
    ............................................................
    7681tccccagaaatgccagattacgtatatcctggcagcgatcgctattttccatgagtgaac7740
    7681aggggtctttacggtctaatgcatataggaccgtcgctagcgataaaaggtactcacttg7740
    .................... ORF 1..............................
    ............................................................
    7741gaacctggtcgaaatcagtgcgttcgaacgctagagcctgttttgcacgttcaccggcat7800
    7741cttggaccagctttagtcacgcaagcttgcgatctcggacaaaacgtgcaagtggccgta7800
    .................... ORF 1..............................
    ............................................................
    7801caacgttttcttttcggatccgccgcataaccagtgaaacagcattgctgtcacttggtc7860
    7801gttgcaaaagaaaagcctaggcggcgtattggtcactttgtcgtaacgacagtgaaccag7860
    .................... ORF 1..............................
    ............................................................
    7861gtggcagcccggaccgacgatgaagcatgtttagctggcccaaatgttgctggatagttt7920
    7861caccgtcgggcctggctgctacttcgtacaaatcgaccgggtttacaacgacctatcaaa7920
    .................... ORF 1..............................
    ............................................................
    7921ttactgccagaccgcgcgcctgaagatatagaagataatcgcgaacatcttcaggttctg7980
    7921aatgacggtctggcgcgcggacttctatatcttctattagcgcttgtagaagtccaagac7980
    .................... ORF 1..............................
    ............................................................
    7981cgggaaaccatttccggttattcaacttgcaccatgccgcccacgaccggcaaacggaca8040
    7981gccctttggtaaaggccaataagttgaacgtggtacggcgggtgctggccgtttgcctgt8040
    .................... ORF 1..............................
    ............................................................
    8041gaagcattttccaggtatgctcagaaaacgcctggcgatccctgaacatgtccatcaggt8100
    8041cttcgtaaaaggtccatacgagtcttttgcggaccgctagggacttgtacaggtagtcca8100
    .................... ORF 1..............................
    ............................................................
    8101tcttgcgaacctcatcactcgttgcatcgaccggtaacttttagattaacatttgtttaa8160
    8101agaacgcttggagtagtgagcaacgtagctggccattgaaaatctaattgtaaacaaatt8160
    ............................................................
    ............................................................
    8161atatgaaattaggcaatgtaacatactgcaggcaaattttggtgtacggtaagtaaattg8220
    8161tatactttaatccgttacattgtatgacgtccgtttaaaaccacatgccattcatttaac8220
    ............................................................
    ............................................................
    8221gacatatgatttaacaaagcgactataagtcagaaagtgagaatgagattgaaataatta8280
    8221ctgtatactaaattgtttcgctgatattcagtctttcactcttactctaactttattaat8280
    ............................................................
    ............................................................
    8281attcaacttattcaattgatgatatgccaggattcctcttcctttatcttcaatgtttcg8340
    8281taagttgaataagttaactactatacggtcctaaggagaaggaaatagaagttacaaagc8340
    ............................................................
    ............................................................
    8341attaacaggtccattatccggtttttagtttcgctgcacattgccgaatgacaatcggat8400
    8341taattgtccaggtaataggccaaaaatcaaagcgacgtgtaacggcttactgttagccta8400
    ............................................................
    HindIII(8408)..............................................
    8401tcctttaagctttgcttttgccctgttttctctccccagtaatcgttgggtgactgaacc8460
    8401aggaaattcgaaacgaaaacgggacaaaagagaggggtcattagcaacccactgacttgg8460
    ............................................................
    ............................................................
    8461atccagtagccgagagttacgtttttcctgatttaataaatatccatatctatttgtctc8520
    8461taggtcatcggctctcaatgcaaaaaggactaaattatttataggtatagataaacagag8520
    ............................................................
    ............................................................
    8521gtggtgttttacagcaactaaccgaaattactattttgcatcatccaaccataaagagac8580
    8521caccacaaaatgtcgttgattggctttaatgataaaacgtagtaggttggtatttctctg8580
    ............................................................
    ............................................................
    8581aacaataattctagaaaacatataacaagtgtttttttctatttacgtctcatacgcaaa8640
    8581ttgttattaagatcttttgtatattgttcacaaaaaaagataaatgcagagtatgcgttt8640
    ............................................................
    ............................................................
    8641gtccactttaccatgttttggaaacttgtacccaaccattcatttttcgattttgtaatg8700
    8641caggtgaaatggtacaaaacctttgaacatgggttggtaagtaaaaagctaaaacattac8700
    ............................................................
    ............................................................
    8701aggctcttttcttctaacaatcattgaggtcattatcatgtgtcctcacctattgtttaa8760
    8701tccgagaaaagaagattgttagtaactccagtaatagtacacaggagtggataacaaatt8760
    ............................................................
    ............................................................
    8761attgaggcttgcgctattcccaaaattgtgggtattattttcatatatcagtatctgcaa8820
    8761taactccgaacgcgataagggttttaacacccataataaaagtatatagtcatagacgtt8820
    ............................................................
    .................... KpnI(8849)..............................
    8821tttcggttcaactccggaagctcggtacccaactgtgggaatactcaggtatcgtaagat8880
    8821aaagccaagttgaggccttcgagccatgggttgacacccttatgagtccatagcattcta8880
    ............................................................
    ............................................................
    8881gcaagagttcgaatctcttagcaaccattattttttttctctcaacataacgagaacaca8940
    8881cgttctcaagcttagagaatcgttggtaataaaaaaaagagagttgtattgctcttgtgt8940
    ............................................................
    ............................................................
    8941caggggcgctatcgcacagaatcaaattcgatgactggaaattttttgttaatttcagag9000
    8941gtccccgcgatagcgtgtcttagtttaagctactgacctttaaaaaacaattaaagtctc9000
    ............................................................
    ............................................................
    9001gtcgcctgacgcatatacctttttcaactgaaaaattgggagaaaaaggaaaggtgagag9060
    9001cagcggactgcgtatatggaaaaagttgactttttaaccctctttttcctttccactctc9060
    ............................................................
    ............................................................
    9061cgccggaaccggcttttcatatagaatagagaagcgttcatgactaaatgcttgcatcac9120
    9061gcggccttggccgaaaagtatatcttatctcttcgcaagtactgatttacgaacgtagtg9120
    ............................................................
    ............................................................
    9121aatacttgaagttgacaatattatttaaggacctattgttttttccaataggtggttagc9180
    9121ttatgaacttcaactgttataataaattcctggataacaaaaaaggttatccaccaatcg9180
    ............................................................
    ............................................................
    9181aatcgtcttactttctaacttttcttaccttttacatttcagcaatatatatatatatat9240
    9181ttagcagaatgaaagattgaaaagaatggaaaatgtaaagtcgttatatatatatatata9240
    ............................................................
    ............................................................
    9241atatatatatttcaaggatataccattgtaatgtctgcccctaagaagatcgtcgttttg9300
    9241tatatatataaagttcctatatggtaacattacagacggggattcttctagcagcaaaac9300
    ........................................ ORF 2..........
    ............................................................
    9301ccaggtgaccacgttggtcaagaaatcacagccgaagccattaaggttcttaaagctatt9360
    9301ggtccactggtgcaaccagttctttagtgtcggcttcggtaattccaagaatttcgataa9360
    .................... ORF 2..............................
    ............................................................
    9361tctgatgttcgttccaatgtcaagttcgatttcgaaaatcatttaattggtggtgctgct9420
    9361agactacaagcaaggttacagttcaagctaaagcttttagtaaattaaccaccacgacga9420
    .................... ORF 2..............................
    ............................................................
    9421atcgatgctacaggtgttccacttccagatgaggcgctggaagcctccaagaaggctgat9480
    9421tagctacgatgtccacaaggtgaaggtctactccgcgaccttcggaggttcttccgacta9480
    .................... ORF 2..............................
    ............................................................
    9481gccgttttgttaggtgctgtgggtggtcctaaatggggtaccggtagtgttagacctgaa9540
    9481cggcaaaacaatccacgacacccaccaggatttaccccatggccatcacaatctggactt9540
    .................... ORF 2..............................
    ............................................................
    9541caaggtttactaaaaatccgtaaagaacttcaattgtacgccaacttaagaccatgtaac9600
    9541gttccaaatgatttttaggcatttcttgaagttaacatgcggttgaattctggtacattg9600
    .................... ORF 2..............................
    ............................................................
    9601tttgcatccgactctcttttagacttatctccaatcaagccacaatttgctaaaggtact9660
    9601aaacgtaggctgagagaaaatctgaatagaggttagttcggtgttaaacgatttccatga9660
    .................... ORF 2..............................
    ............................................................
    9661gacttcgttgttgttagagaattagtgggaggtatttactttggtaagagaaaggaagac9720
    9661ctgaagcaacaacaatctcttaatcaccctccataaatgaaaccattctctttccttctg9720
    .................... ORF 2..............................
    ............................................................
    9721gatggtgatggtgtcgcttgggatagtgaacaatacaccgttccagaagtgcaaagaatc9780
    9721ctaccactaccacagcgaaccctatcacttgttatgtggcaaggtcttcacgtttcttag9780
    .................... ORF 2..............................
    ............................................................
    9781acaagaatggccgctttcatggccctacaacatgagccaccattgcctatttggtccttg9840
    9781tgttcttaccggcgaaagtaccgggatgttgtactcggtggtaacggataaaccaggaac9840
    .................... ORF 2..............................
    ............................................................
    9841gataaagctaatgttttggcctcttcaagattatggagaaaaactgtggaggaaaccatc9900
    9841ctatttcgattacaaaaccggagaagttctaatacctctttttgacacctcctttggtag9900
    .................... ORF 2..............................
    ............................................................
    9901aagaacgaatttcctacattgaaagttcaacatcaattgattgattctgccgccatgatc9960
    9901ttcttgcttaaaggatgtaactttcaagttgtagttaactaactaagacggcggtactag9960
    .................... ORF 2..............................
    ............................................................
    9961ctagttaagaacccaacccacctaaatggtattataatcaccagcaacatgtttggtgat10020
    9961gatcaattcttgggttgggtggatttaccataatattagtggtcgttgtacaaaccacta10020
    .................... ORF 2..............................
    EcoRV(10021)................................................
    10021atcatctccgatgaagcctccgttatcccaggctccttgggtttgttgccatctgcgtcc10080
    10021tagtagaggctacttcggaggcaatagggtccgaggaacccaaacaacggtagacgcagg10080
    .................... ORF 2..............................
    ................................................. NcoI(10132)
    10081ttggcctctttgccagacaagaacaccgcatttggtttgtacgaaccatgccatggttcc10140
    10081aaccggagaaacggtctgttcttgtggcgtaaaccaaacatgcttggtacggtaccaagg10140
    .................... ORF 2..............................
    ............................................................
    10141gctccagatttgccaaagaataaggtcaaccctatcgccactatcttgtctgctgcaatg10200
    10141cgaggtctaaacggtttcttattccagttgggatagcggtgatagaacagacgacgttac10200
    .................... ORF 2..............................
    ............................................................
    10201atgttgaaattgtcattgaacttgcctgaagaaggtaaagccattgaagatgcagttaaa10260
    10201tacaactttaacagtaacttgaacggacttcttccatttcggtaacttctacgtcaattt10260
    .................... ORF 2..............................
    ............................................................
    10261aaggttttggatgcaggtatcagaactggtgatttaggtggttccaacagtaccaccgaa10320
    10261ttccaaaacctacgtccatagtcttgaccactaaatccaccaaggttgtcatggtggctt10320
    .................... ORF 2..............................
    ............................................................
    10321gtcggtgatgctgtcgccgaagaagttaagaaaatccttgcttaaaaagattctcttttt10380
    10321cagccactacgacagcggcttcttcaattcttttaggaacgaatttttctaagagaaaaa10380
    .................... ORF 2..............................
    ............................................................
    10381ttgtgatatttgtacataaactttataaatgaaattcataatagaaacgacacgaaatta10440
    10381aacactataaacatgtatttgaaatatttactttaagtattatctttgctgtgctttaat10440
    ............................................................
    ............................................................
    10441caaaatggaatatgttcatagggtagacgaaactatatacgcaatctacatacatttatc10500
    10441gttttaccttatacaagtatcccatctgctttgatatatgcgttagatgtatgtaaatag10500
    ............................................................
    ............................................................
    10501aagaaggagaaaaaggaggatgtaaaggaatacaggtaagcaaattgatactaatggctc10560
    10501ttcttcctctttttcctcctacatttccttatgtccattcgtttaactatgattaccgag10560
    ............................................................
    ............................................................
    10561aacgtgataaggaaaaagaattgcactttaacattaatattgacaaggaggagggcatca10620
    10561ttgcactattcctttttcttaacgtgaaattgtaattataactgttcctcctcccgtagt10620
    ............................................................
    ............................................................
    10621ca..........................................................10622
    10621gt..........................................................10622
    ............................................................

    References

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    Reference number: [2] Reference positions: 1-10622 Reference author: Watson A.T.; Reference title: ; Reference location: Submitted (27-JUN-2008) to the EMBL/GenBank/DDBJ databases. Reference location: Genome Damage and Stability Centre, University of Sussex, Falmer, Brighton, Reference location: East Sussex BN1 9RQ, UK



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