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Sequence of pAsRed2-N1
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Sequence of pAsRed2-N1
: 4712 BP; 1104 A; 1301 C; 1244 G; 1063 T; 0 other; |
| AseI(7) | .......... | .......... | .......... | .......... | .......... |
| 1 | tagttattaa | tagtaatcaa | ttacggggtc | attagttcat | agcccatata | tggagttccg | 60 |
| 1 | atcaataatt | atcattagtt | aatgccccag | taatcaagta | tcgggtatat | acctcaaggc | 60 |
| .......... | .......... | ....... | CMV_immearly_pro | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | cgttacataa | cttacggtaa | atggcccgcc | tggctgaccg | cccaacgacc | <
font color="#000000" style="font-size:10px" face="Courier">cccgcccatt | 120 |
| 61 | gcaatgtatt | gaatgccatt | taccgggcgg | accgactggc | gggttgctgg | gggcgggtaa | 120 |
| .......... | ....... | CMV_immearly_pro | CAG_enh | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | gacgtcaata | atgacgtatg | ttcccatagt | aacgccaata | gggactttcc |
attgacgtca | 180 |
| 121 | ctgcagttat | tactgcatac | aagggtatca | ttgcggttat | ccctgaaagg | taactgcagt | 180 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | NdeI(234) |
| 181 | atgggtggag | tatttacggt | aaactgccca | cttggcagta | catcaagtgt |
atcatatgcc | 240 |
| 181 | tacccacctc | ataaatgcca | tttgacgggt | gaaccgtcat | gtagttcaca | tagtatacgg | 240 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 241 | aagtacgccc | cctattgacg | tcaatgacgg | taaatggccc | gcctggcatt |
atgcccagta | 300 |
| 241 | ttcatgcggg | ggataactgc | agttactgcc | atttaccggg | cggaccgtaa | tacgggtcat | 300 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | catgacctta | tgggactttc | ctacttggca | gtacatctac | gtattagtca |
tcgctattac | 360 |
| 301 | gtactggaat | accctgaaag | gatgaaccgt | catgtagatg | cataatcagt | agcgataatg | 360 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | catggtgatg | cggttttggc | agtacatcaa | tgggcgtgga | tagcggtttg | actcacgggg | 420 |
| 361 | gtaccactac | gccaaaaccg | tcatgtagtt | acccgcacct | atcgccaaac | tgagtgcccc | 420 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | atttccaagt | ctccacccca | ttgacgtcaa | tgggagtttg | ttttggcacc | aaaatcaacg | 480 |
| 421 | taaaggttca | gaggtggggt | aactgcagtt | accctcaaac | aaaaccgtgg | ttttagttgc | 480 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | ggactttcca | aaatgtcgta | acaactccgc | cccattgacg | caaatgggcg | gtaggcgtgt | 540 |
| 481 | cctgaaaggt | tttacagcat | tgttgaggcg | gggtaactgc | gtttacccgc | catccgcaca | 540 |
| .......... | ....... | CMV_immearly_pro | .. | CMV_fwd_pri CMV_pro | ..... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 541 | acggtgggag | gtctatataa | gcagagctgg | tttagtgaac | cgtcagatcc | gctagcgcta | 600 |
| 541 | tgccaccctc | cagatatatt | cgtctcgacc | aaatcacttg | gcagtctagg | cgatcgcgat | 600 |
| ....... | CMV_immearly_pro | CMV_pro | ....... | .......... | .......... |
| BglII,XhoI | SacI,HindIII EcoRI | PstI(638),SalI(639) | | |
| 601 | ccggactcag | atctcgagct | caagcttcga | attctgcagt | cgacggtacc | gcgggcccgg | 660 |
| 601 | ggcctgagtc | tagagctcga | gttcgaagct | taagacgtca | gctgccatgg | cgcccgggcc | 660 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| AgeI(666) | .......... | .......... | .......... | .......... | .......... |
| 661 | gatccaccgg | tcgccaccat | ggcctctttg | ctgaagaaga | ccatgccctt | caggaccacc | 720 |
| 661 | ctaggtggcc | agcggtggta | ccggagaaac | gacttcttct | ggtacgggaa | gtcctggtgg | 720 |
| .......... | .......... | .......... | ORF 1 | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | atcgagggca | ccgtgaacgg | ccactacttc | aagtgcaccg | gcaagggcga | gggcaacccc | 780 |
| 721 | tagctcccgt | ggcacttgcc | ggtgatgaag | ttcacgtggc | cgttcccgct | cccgttgggg | 780 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 781 | ctggagggca | cccaggagat | gaagatcgag | gtgatcgagg | gcggccccct | gcccttcgcc | 840 |
| 781 | gacctcccgt | gggtcctcta | cttctagctc | cactagctcc | cgccggggga | cgggaagcgg | 840 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | ttccacatcc | tgtccacctc | ctgcatgtac | ggctccaagg | ccttcatcaa | gtacgtgtcc | 900 |
| 841 | aaggtgtagg | acaggtggag | gacgtacatg | ccgaggttcc | ggaagtagtt | catgcacagg | 900 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | ggcatccccg | actacttcaa | gcagtccctc | cccgagggct | tcacctggga | gcgcaccacc | 960 |
| 901 | ccgtaggggc | tgatgaagtt | cgtcagggag | gggctcccga | agtggaccct | cgcgtggtgg | 960 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | acctacgagg | acggcggctt | cctgaccgcc | caccaggaca | cctccctgga | cggcgactgc | 1020 |
| 961 | tggatgctcc | tgccgccgaa | ggactggcgg | gtggtcctgt | ggagggacct | gccgctgacg | 1020 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1021 | ctggtgtaca | aggtgaagat | cctgggcaac | aacttccccg | ccgacggccc | cgtgatgcag | 1080 |
| 1021 | gaccacatgt | tccacttcta | ggacccgttg | ttgaaggggc | ggctgccggg | gcactacgtc | 1080 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1081 | aacaaggccg | gccgctggga | gccctccacc | gagatcgtgt | acgaggtgga | cggcgtgctg | 1140 |
| 1081 | ttgttccggc | cggcgaccct | cgggaggtgg | ctctagcaca | tgctccacct | gccgcacgac | 1140 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | cgcggccagt | ccctgatggc | cctggagtgc | cccggcggtc | gccacctgac | ctgccacctg | 1200 |
| 1141 | gcgccggtca | gggactaccg | ggacctcacg | gggccgccag | cggtggactg | gacggtggac | 1200 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | cacaccacct | accgctccaa | gaagcccgcc | tccgccctga | agatgcccgg | cttccacttc | 1260 |
| 1201 | gtgtggtgga | tggcgaggtt | cttcgggcgg | aggcgggact | tctacgggcc | gaaggtgaag | 1260 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1261 | gaggaccacc | gcatcgagat | cctggaggag | gtggagaagg | gcaagtgcta | caagcagtac | 1320 |
| 1261 | ctcctggtgg | cgtagctcta | ggacctcctc | cacctcttcc | cgttcacgat | gttcgtcatg | 1320 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1321 | gaggccgccg | tgggccgcta | ctgcgacgcc | gccccctcca | agctgggcca | caactgaagc | 1380 |
| 1321 | ctccggcggc | acccggcgat | gacgctgcgg | cgggggaggt | tcgacccggt | gttgacttcg | 1380 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1381 | ggccgcgact | ctagatcata | atcagccata | ccacatttgt | agaggtttta | cttgctttaa | 1440 |
| 1381 | ccggcgctga | gatctagtat | tagtcggtat | ggtgtaaaca | tctccaaaat | gaacgaaatt | 1440 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | HpaI(1499) |
| 1441 | aaaacctccc | acacctcccc | ctgaacctga | aacataaaat | gaatgcaatt | gttgttgtta | 1500 |
| 1441 | ttttggaggg | tgtggagggg | gacttggact | ttgtatttta | cttacgttaa | caacaacaat | 1500 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | acttgtttat | tgcagcttat | aatggttaca | aataaagcaa | tagcatcaca | aatttcacaa | 1560 |
| 1501 | tgaacaaata | acgtcgaata | ttaccaatgt | ttatttcgtt | atcgtagtgt | ttaaagtgtt | 1560 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | ......... | AflII(1618) |
| 1561 | ataaagcatt | tttttcactg | cattctagtt | gtggtttgtc | caaactcatc | aatgtatctt | 1620 |
| 1561 | tatttcgtaa | aaaaagtgac | gtaagatcaa | caccaaacag | gtttgagtag | ttacatagaa | 1620 |
| .......... | .......... | ......... | EBV_rev_pri | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1621 | aaggcgtaaa | ttgtaagcgt | taatattttg | ttaaaattcg | cgttaaattt | ttgttaaatc | 1680 |
| 1621 | ttccgcattt | aacattcgca | attataaaac | aattttaagc | gcaatttaaa | aacaatttag | 1680 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1681 | agctcatttt | ttaaccaata | ggccgaaatc | ggcaaaatcc | cttataaatc | aaaagaatag | 1740 |
| 1681 | tcgagtaaaa | aattggttat | ccggctttag | ccgttttagg | gaatatttag | ttttcttatc | 1740 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | accgagatag | ggttgagtgt | tgttccagtt | tggaacaaga | gtccactatt | aaagaacgtg | 1800 |
| 1741 | tggctctatc | ccaactcaca | acaaggtcaa | accttgttct | caggtgataa | tttcttgcac | 1800 |
| .......... | .......... | .......... | f1_origin | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | gactccaacg | tcaaagggcg | aaaaaccgtc | tatcagggcg | atggcccact | acgtgaacca | 1860 |
| 1801 | ctgaggttgc | agtttcccgc | tttttggcag | atagtcccgc | taccgggtga | tgcacttggt | 1860 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1861 | tcaccctaat | caagtttttt | ggggtcgagg | tgccgtaaag | cactaaatcg | gaaccctaaa | 1920 |
| 1861 | agtgggatta | gttcaaaaaa | ccccagctcc | acggcatttc | gtgatttagc | cttgggattt | 1920 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | gggagccccc | gatttagagc | ttgacgggga | aagccggcga | acgtggcgag | aaaggaaggg | 1980 |
| 1921 | ccctcggggg | ctaaatctcg | aactgcccct | ttcggccgct | tgcaccgctc | tttccttccc | 1980 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | aagaaagcga | aaggagcggg | cgctagggcg | ctggcaagtg | tagcggtcac | gctgcgcgta | 2040 |
| 1981 | ttctttcgct | ttcctcgccc | gcgatcccgc | gaccgttcac | atcgccagtg | cgacgcgcat | 2040 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | accaccacac | ccgccgcgct | taatgcgccg | ctacagggcg | cgtcaggtgg | cacttttcgg | 2100 |
| 2041 | tggtggtgtg | ggcggcgcga | attacgcggc | gatgtcccgc | gcagtccacc | gtgaaaagcc | 2100 |
| .......... | f1_origin | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | ggaaatgtgc | gcggaacccc | tatttgttta | tttttctaaa | tacattcaaa | tatgtatccg | 2160 |
| 2101 | cctttacacg | cgccttgggg | ataaacaaat | aaaaagattt | atgtaagttt | atacataggc | 2160 |
| .......... | .......... | .......... | .......... | .......... | AmpR_pro |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | ctcatgagac | aataaccctg | ataaatgctt | caataatatt | gaaaaaggaa | gagtcctgag | 2220 |
| 2161 | gagtactctg | ttattgggac | tatttacgaa | gttattataa | ctttttcctt | ctcaggactc | 2220 |
| AmpR_pro | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | gcggaaagaa | ccagctgtgg | aatgtgtgtc | agttagggtg | tggaaagtcc | ccaggctccc | 2280 |
| 2221 | cgcctttctt | ggtcgacacc | ttacacacag | tcaatcccac | acctttcagg | ggtccgaggg | 2280 |
| .......... | ......... | pBABE_3_pri | ..... | SV40_enh SV40_pro | ...... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | cagcaggcag | aagtatgcaa | agcatgcatc | tcaattagtc | agcaaccagg | tgtggaaagt | 2340 |
| 2281 | gtcgtccgtc | ttcatacgtt | tcgtacgtag | agttaatcag | tcgttggtcc | acacctttca | 2340 |
| .......... | ...... | SV40_enh SV40_pro | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | ccccaggctc | cccagcaggc | agaagtatgc | aaagcatgca | tctcaattag | tcagcaacca | 2400 |
| 2341 | ggggtccgag | gggtcgtccg | tcttcatacg | tttcgtacgt | agagttaatc | agtcgttggt | 2400 |
| .......... | ...... | SV40_enh SV40_pro | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | tagtcccgcc | cctaactccg | cccatcccgc | ccctaactcc | gcccagttcc | gcccattctc | 2460 |
| 2401 | atcagggcgg | ggattgaggc | gggtagggcg | gggattgagg | cgggtcaagg | cgggtaagag | 2460 |
| .......... | ...... | SV40_enh SV40_pro | ..... | SV40_origin | ......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | cgccccatgg | ctgactaatt | ttttttattt | atgcagaggc | cgaggccgcc | tcggcctctg | 2520 |
| 2461 | gcggggtacc | gactgattaa | aaaaaataaa | tacgtctccg | gctccggcgg | agccggagac | 2520 |
| .......... | ... | SV40_pro SV40_origin | SV40pro_F_pri | ... | .......... |
| .......... | .......... | .......... | .......... | .......... | ClaI(2576) |
| 2521 | agctattcca | gaagtagtga | ggaggctttt | ttggaggcct | aggcttttgc | aaagatcgat | 2580 |
| 2521 | tcgataaggt | cttcatcact | cctccgaaaa | aacctccgga | tccgaaaacg | tttctagcta | 2580 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | caagagacag | gatgaggatc | gtttcgcatg | attgaacaag | atggattgca | cgcaggttct | 2640 |
| 2581 | gttctctgtc | ctactcctag | caaagcgtac | taacttgttc | tacctaacgt | gcgtccaaga | 2640 |
| .......... | .......... | .......... | ........ | ORF 1 Neomycin | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | ccggccgctt | gggtggagag | gctattcggc | tatgactggg | cacaacagac | aatcggctgc | 2700 |
| 2641 | ggccggcgaa | cccacctctc | cgataagccg | atactgaccc | gtgttgtctg | ttagccgacg | 2700 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | tctgatgccg | ccgtgttccg | gctgtcagcg | caggggcgcc | cggttctttt | tgtcaagacc | 2760 |
| 2701 | agactacggc | ggcacaaggc | cgacagtcgc | gtccccgcgg | gccaagaaaa | acagttctgg | 2760 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2761 | gacctgtccg | gtgccctgaa | tgaactgcaa | gacgaggcag | cgcggctatc | gtggctggcc | 2820 |
| 2761 | ctggacaggc | cacgggactt | acttgacgtt | ctgctccgtc | gcgccgatag | caccgaccgg | 2820 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | FspI(2838) | .......... | .......... | .......... | .......... |
| 2821 | acgacgggcg | ttccttgcgc | agctgtgctc | gacgttgtca | ctgaagcggg | aagggactgg | 2880 |
| 2821 | tgctgcccgc | aaggaacgcg | tcgacacgag | ctgcaacagt | gacttcgccc | ttccctgacc | 2880 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2881 | ctgctattgg | gcgaagtgcc | ggggcaggat | ctcctgtcat | ctcaccttgc | tcctgccgag | 2940 |
| 2881 | gacgataacc | cgcttcacgg | ccccgtccta | gaggacagta | gagtggaacg | aggacggctc | 2940 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2941 | aaagtatcca | tcatggctga | tgcaatgcgg | cggctgcata | cgcttgatcc | ggctacctgc | 3000 |
| 2941 | tttcataggt | agtaccgact | acgttacgcc | gccgacgtat | gcgaactagg | ccgatggacg | 3000 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | ccattcgacc | accaagcgaa | acatcgcatc | gagcgagcac | gtactcggat | ggaagccggt | 3060 |
| 3001 | ggtaagctgg | tggttcgctt | tgtagcgtag | ctcgctcgtg | catgagccta | ccttcggcca | 3060 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | cttgtcgatc | aggatgatct | ggacgaagag | catcaggggc | tcgcgccagc | cgaactgttc | 3120 |
| 3061 | gaacagctag | tcctactaga | cctgcttctc | gtagtccccg | agcgcggtcg | gcttgacaag | 3120 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | gccaggctca | aggcgagcat | gcccgacggc | gaggatctcg | tcgtgaccca | tggcgatgcc | 3180 |
| 3121 | cggtccgagt | tccgctcgta | cgggctgccg | ctcctagagc | agcactgggt | accgctacgg | 3180 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | tgcttgccga | atatcatggt | ggaaaatggc | cgcttttctg | gattcatcga | ctgtggccgg | 3240 |
| 3181 | acgaacggct | tatagtacca | ccttttaccg | gcgaaaagac | ctaagtagct | gacaccggcc | 3240 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | ctgggtgtgg | cggaccgcta | tcaggacata | gcgttggcta | cccgtgatat | tgctgaagag | 3300 |
| 3241 | gacccacacc | gcctggcgat | agtcctgtat | cgcaaccgat | gggcactata | acgacttctc | 3300 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | cttggcggcg | aatgggctga | ccgcttcctc | gtgctttacg | gtatcgccgc | tcccgattcg | 3360 |
| 3301 | gaaccgccgc | ttacccgact | ggcgaaggag | cacgaaatgc | catagcggcg | agggctaagc | 3360 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | cagcgcatcg | ccttctatcg | ccttcttgac | gagttcttct | gagcgggact | ctggggttcg | 3420 |
| 3361 | gtcgcgtagc | ggaagatagc | ggaagaactg | ctcaagaaga | ctcgccctga | gaccccaagc | 3420 |
| .......... | Neomycin | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | aaatgaccga | ccaagcgacg | cccaacctgc | catcacgaga | tttcgattcc | accgccgcct | 3480 |
| 3421 | tttactggct | ggttcgctgc | gggttggacg | gtagtgctct | aaagctaagg | tggcggcgga | 3480 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | tctatgaaag | gttgggcttc | ggaatcgttt | tccgggacgc | cggctggatg | atcctccagc | 3540 |
| 3481 | agatactttc | caacccgaag | ccttagcaaa | aggccctgcg | gccgacctac | taggaggtcg | 3540 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | gcggggatct | catgctggag | ttcttcgccc | accctagggg | gaggctaact | gaaacacgga | 3600 |
| 3541 | cgcccctaga | gtacgacctc | aagaagcggg | tgggatcccc | ctccgattga | ctttgtgcct | 3600 |
| .......... | .......... | .......... | .......... | TK_PA_term | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | aggagacaat | accggaagga | acccgcgcta | tgacggcaat | aaaaagacag | aataaaacgc | 3660 |
| 3601 | tcctctgtta | tggccttcct | tgggcgcgat | actgccgtta | tttttctgtc | ttattttgcg | 3660 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | acggtgttgg | gtcgtttgtt | cataaacgcg | gggttcggtc | ccagggctgg | cactctgtcg | 3720 |
| 3661 | tgccacaacc | cagcaaacaa | gtatttgcgc | cccaagccag | ggtcccgacc | gtgagacagc | 3720 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | ataccccacc | gagaccccat | tggggccaat | acgcccgcgt | ttcttccttt | tccccacccc | 3780 |
| 3721 | tatggggtgg | ctctggggta | accccggtta | tgcgggcgca | aagaaggaaa | aggggtgggg | 3780 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | accccccaag | ttcgggtgaa | ggcccagggc | tcgcagccaa | cgtcggggcg | gcaggccctg | 3840 |
| 3781 | tggggggttc | aagcccactt | ccgggtcccg | agcgtcggtt | gcagccccgc | cgtccgggac | 3840 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | ccatagcctc | aggttactca | tatatacttt | agattgattt | aaaacttcat | ttttaattta | 3900 |
| 3841 | ggtatcggag | tccaatgagt | atatatgaaa | tctaactaaa | ttttgaagta | aaaattaaat | 3900 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | aaaggatcta | ggtgaagatc | ctttttgata | atctcatgac | caaaatccct | taacgtgagt | 3960 |
| 3901 | tttcctagat | ccacttctag | gaaaaactat | tagagtactg | gttttaggga | attgcactca | 3960 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | tttcgttcca | ctgagcgtca | gaccccgtag | aaaagatcaa | aggatcttct | tgagatcctt | 4020 |
| 3961 | aaagcaaggt | gactcgcagt | ctggggcatc | ttttctagtt | tcctagaaga | actctaggaa | 4020 |
| .......... | .......... | .......... | ........ | pBR322_origin | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4021 | tttttctgcg | cgtaatctgc | tgcttgcaaa | caaaaaaacc | accgctacca | gcggtggttt | 4080 |
| 4021 | aaaaagacgc | gcattagacg | acgaacgttt | gtttttttgg | tggcgatggt | cgccaccaaa | 4080 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | gtttgccgga | tcaagagcta | ccaactcttt | ttccgaaggt | aactggcttc | agcagagcgc | 4140 |
| 4081 | caaacggcct | agttctcgat | ggttgagaaa | aaggcttcca | ttgaccgaag | tcgtctcgcg | 4140 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | agataccaaa | tactgtcctt | ctagtgtagc | cgtagttagg | ccaccacttc | aagaactctg | 4200 |
| 4141 | tctatggttt | atgacaggaa | gatcacatcg | gcatcaatcc | ggtggtgaag | ttcttgagac | 4200 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | tagcaccgcc | tacatacctc | gctctgctaa | tcctgttacc | agtggctgct | gccagtggcg | 4260 |
| 4201 | atcgtggcgg | atgtatggag | cgagacgatt | aggacaatgg | tcaccgacga | cggtcaccgc | 4260 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | ataagtcgtg | tcttaccggg | ttggactcaa | gacgatagtt | accggataag | gcgcagcggt | 4320 |
| 4261 | tattcagcac | agaatggccc | aacctgagtt | ctgctatcaa | tggcctattc | cgcgtcgcca | 4320 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | cgggctgaac | ggggggttcg | tgcacacagc | ccagcttgga | gcgaacgacc | tacaccgaac | 4380 |
| 4321 | gcccgacttg | ccccccaagc | acgtgtgtcg | ggtcgaacct | cgcttgctgg | atgtggcttg | 4380 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | tgagatacct | acagcgtgag | ctatgagaaa | gcgccacgct | tcccgaaggg | agaaaggcgg | 4440 |
| 4381 | actctatgga | tgtcgcactc | gatactcttt | cgcggtgcga | agggcttccc | tctttccgcc | 4440 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | acaggtatcc | ggtaagcggc | agggtcggaa | caggagagcg | cacgagggag | cttccagggg | 4500 |
| 4441 | tgtccatagg | ccattcgccg | tcccagcctt | gtcctctcgc | gtgctccctc | gaaggtcccc | 4500 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4501 | gaaacgcctg | gtatctttat | agtcctgtcg | ggtttcgcca | cctctgactt | gagcgtcgat | 4560 |
| 4501 | ctttgcggac | catagaaata | tcaggacagc | ccaaagcggt | ggagactgaa | ctcgcagcta | 4560 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4561 | ttttgtgatg | ctcgtcaggg | gggcggagcc | tatggaaaaa | cgccagcaac | gcggcctttt | 4620 |
| 4561 | aaaacactac | gagcagtccc | cccgcctcgg | ataccttttt | gcggtcgttg | cgccggaaaa | 4620 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4621 | tacggttcct | ggccttttgc | tggccttttg | ctcacatgtt | ctttcctgcg | ttatcccctg | 4680 |
| 4621 | atgccaagga | ccggaaaacg | accggaaaac | gagtgtacaa | gaaaggacgc | aataggggac | 4680 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4681 | attctgtgga | taaccgtatt | accgccatgc | at........ | .......... | .......... | 4712 |
| 4681 | taagacacct | attggcataa | tggcggtacg | ta........ | .......... | .......... | 4712 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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