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Sequence of pBAD18-Kan
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Sequence of pBAD18-Kan
: 5437 BP; 1339 A; 1379 C; 1337 G; 1382 T; 0 other; |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1 | atcgatgcat | aatgtgcctg | tcaaatggac | gaagcaggga | ttctgcaaac | cctatgctac | 60 |
| 1 | tagctacgta | ttacacggac | agtttacctg | cttcgtccct | aagacgtttg | ggatacgatg | 60 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | tccgtcaagc | cgtcaattgt | ctgattcgtt | accaattatg | acaacttgac | ggctacatca | 120 |
| 61 | aggcagttcg | gcagttaaca | gactaagcaa | tggttaatac | tgttgaactg | ccgatgtagt | 120 |
| .......... | .......... | .......... | .......... | AraC ORF 3 | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | ttcacttttt | cttcacaacc | ggcacggaac | tcgctcgggc | tggccccggt | gcatttttta | 180 |
| 121 | aagtgaaaaa | gaagtgttgg | ccgtgccttg | agcgagcccg | accggggcca |
cgtaaaaaat | 180 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 181 | aatacccgcg | agaaatagag | ttgatcgtca | aaaccaacat | tgcgaccgac | ggtggcgata | 240 |
| 181 | ttatgggcgc | tctttatctc | aactagcagt | tttggttgta | acgctggctg |
ccaccgctat | 240 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 241 | ggcatccggg | tggtgctcaa | aagcagcttc | gcctggctga | tacgttggtc | ctcgcgccag | 300 |
| 241 | ccgtaggccc | accacgagtt | ttcgtcgaag | cggaccgact | atgcaaccag |
gagcgcggtc | 300 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | cttaagacgc | taatccctaa | ctgctggcgg | aaaagatgtg | acagacgcga | cggcgacaag | 360 |
| 301 | gaattctgcg | attagggatt | gacgaccgcc | ttttctacac | tgtctgcgct |
gccgctgttc | 360 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | EcoRV(386) | .......... | .......... | .......... |
| 361 | caaacatgct | gtgcgacgct | ggcgatatca | aaattgctgt | ctgccaggtg | atcgctgatg | 420 |
| 361 | gtttgtacga | cacgctgcga | ccgctatagt | tttaacgaca | gacggtccac |
tagcgactac | 420 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | tactgacaag | cctcgcgtac | ccgattatcc | atcggtggat | ggagcgactc | gttaatcgct | 480 |
| 421 | atgactgttc | ggagcgcatg | ggctaatagg | tagccaccta | cctcgctgag |
caattagcga | 480 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | tccatgcgcc | gcagtaacaa | ttgctcaagc | agatttatcg | ccagcagctc | cgaatagcgc | 540 |
| 481 | aggtacgcgg | cgtcattgtt | aacgagttcg | tctaaatagc | ggtcgtcgag |
gcttatcgcg | 540 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 541 | ccttcccctt | gcccggcgtt | aatgatttgc | ccaaacaggt | cgctgaaatg | cggctggtgc | 600 |
| 541 | ggaaggggaa | cgggccgcaa | ttactaaacg | ggtttgtcca | gcgactttac |
gccgaccacg | 600 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 601 | gcttcatccg | ggcgaaagaa | ccccgtattg | gcaaatattg | acggccagtt | aagccattca | 660 |
| 601 | cgaagtaggc | ccgctttctt | ggggcataac | cgtttataac | tgccggtcaa |
ttcggtaagt | 660 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 661 | tgccagtagg | cgcgcggacg | aaagtaaacc | cactggtgat | accattcgcg | agcctccgga | 720 |
| 661 | acggtcatcc | gcgcgcctgc | tttcatttgg | gtgaccacta | tggtaagcgc |
tcggaggcct | 720 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | tgacgaccgt | agtgatgaat | ctctcctggc | gggaacagca | aaatatcacc | cggtcggcaa | 780 |
| 721 | actgctggca | tcactactta | gagaggaccg | cccttgtcgt | tttatagtgg |
gccagccgtt | 780 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 781 | acaaattctc | gtccctgatt | tttcaccacc | ccctgaccgc | gaatggtgag | attgagaata | 840 |
| 781 | tgtttaagag | cagggactaa | aaagtggtgg | gggactggcg | cttaccactc |
taactcttat | 840 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | taacctttca | ttcccagcgg | tcggtcgata | aaaaaatcga | gataaccgtt | ggcctcaatc | 900 |
| 841 | attggaaagt | aagggtcgcc | agccagctat | ttttttagct | ctattggcaa |
ccggagttag | 900 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | ggcgttaaac | ccgccaccag | atgggcatta | aacgagtatc | ccggcagcag | gggatcattt | 960 |
| 901 | ccgcaatttg | ggcggtggtc | tacccgtaat | ttgctcatag | ggccgtcgtc |
ccctagtaaa | 960 |
| .......... | .......... | AraC ORF 3 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | tgcgcttcag | ccatactttt | catactcccg | ccattcagag | aagaaaccaa | ttgtccatat | 1020 |
| 961 | acgcgaagtc | ggtatgaaaa | gtatgagggc | ggtaagtctc | ttctttggtt | aacaggtata | 1020 |
| AraC | .......... | ORF 3 | .......... | .......... | araO2 |
| .......... | .......... | .......... | .......... | .......... | AgeI(1074) |
| 1021 | tgcatcagac | attgccgtca | ctgcgtcttt | tactggctct | tctcgctaac | caaaccggta | 1080 |
| 1021 | acgtagtctg | taacggcagt | gacgcagaaa | atgaccgaga | agagcgattg | gtttggccat | 1080 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1081 | accccgctta | ttaaaagcat | tctgtaacaa | agcgggacca | aagccatgac | aaaaacgcgt | 1140 |
| 1081 | tggggcgaat | aattttcgta | agacattgtt | tcgccctggt | ttcggtactg | tttttgcgca | 1140 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | aacaaaagtg | tctataatca | cggcagaaaa | gtccacattg | attatttgca | cggcgtcaca | 1200 |
| 1141 | ttgttttcac | agatattagt | gccgtctttt | caggtgtaac | taataaacgt | gccgcagtgt | 1200 |
| .......... | .......... | araO1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | ctttgctatg | ccatagcatt | tttatccata | agattagcgg | atcctacctg | acgcttttta | 1260 |
| 1201 | gaaacgatac | ggtatcgtaa | aaataggtat | tctaatcgcc | taggatggac | tgcgaaaaat | 1260 |
| CAP_BS | pBAD_fwd_pri | ........ | AraI1I2 | .......... | ARA_pro |
| .......... | .......... | ......... | NheI(1300) | EcoRI(1306) | ......... |
| 1261 | tcgcaactct | ctactgtttc | tccatacccg | tttttttggg | ctagcgaatt | cgagctcggt | 1320 |
| 1261 | agcgttgaga | gatgacaaag | aggtatgggc | aaaaaaaccc | gatcgcttaa | gctcgagcca | 1320 |
| ARA_pro | .......... | .......... | .......... | .......... | .......... |
| KpnI(1322) | XbaI(1333) SalI(1339) | PstI(1349) | | ........ | .......... |
| 1321 | acccggggat | cctctagagt | cgacctgcag | gcatgcaagc | ttggctgttt | tggcggatga | 1380 |
| 1321 | tgggccccta | ggagatctca | gctggacgtc | cgtacgttcg | aaccgacaaa | accgcctact | 1380 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1381 | gagaagattt | tcagcctgat | acagattaaa | tcagaacgca | gaagcggtct | gataaaacag | 1440 |
| 1381 | ctcttctaaa | agtcggacta | tgtctaattt | agtcttgcgt | cttcgccaga | ctattttgtc | 1440 |
| .......... | . | pBAD_rev_pri pTrcHis_rev_pri | . | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1441 | aatttgcctg | gcggcagtag | cgcggtggtc | ccacctgacc | ccatgccgaa | ctcagaagtg | 1500 |
| 1441 | ttaaacggac | cgccgtcatc | gcgccaccag | ggtggactgg | ggtacggctt | gagtcttcac | 1500 |
| .......... | .......... | .......... | rrnB_term | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | aaacgccgta | gcgccgatgg | tagtgtgggg | tctccccatg | cgagagtagg | gaactgccag | 1560 |
| 1501 | tttgcggcat | cgcggctacc | atcacacccc | agaggggtac | gctctcatcc | cttgacggtc | 1560 |
| .......... | .......... | rrnB_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1561 | gcatcaaata | aaacgaaagg | ctcagtcgaa | agactgggcc | tttcgtttta | tctgttgttt | 1620 |
| 1561 | cgtagtttat | tttgctttcc | gagtcagctt | tctgacccgg | aaagcaaaat | agacaacaaa | 1620 |
| .......... | .... | rrnB_term rrnB_T1_term | .... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1621 | gtcggtgaac | gctctcctga | gtaggacaaa | tccgccggga | gcggatttga | acgttgcgaa | 1680 |
| 1621 | cagccacttg | cgagaggact | catcctgttt | aggcggccct | cgcctaaact | tgcaacgctt | 1680 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1681 | gcaacggccc | ggagggtggc | gggcaggacg | cccgccataa | actgccaggc | atcaaattaa | 1740 |
| 1681 | cgttgccggg | cctcccaccg | cccgtcctgc | gggcggtatt | tgacggtccg | tagtttaatt | 1740 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | gcagaaggcc | atcctgacgg | atggcctttt | tgcgtttcta | caaactcttt | tgtttatttt | 1800 |
| 1741 | cgtcttccgg | taggactgcc | taccggaaaa | acgcaaagat | gtttgagaaa | acaaataaaa | 1800 |
| ......... | rrnB_T2_term | ......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | tctaaataca | ttcaaatatg | tatccgctca | tgagacaata | accctgataa | atgcttcaat | 1860 |
| 1801 | agatttatgt | aagtttatac | ataggcgagt | actctgttat | tgggactatt | tacgaagtta | 1860 |
| .......... | .......... | AmpR_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1861 | aatattgaaa | aaggaagagt | atgagtattc | aacatttccg | tgtcgccctt | attccctttt | 1920 |
| 1861 | ttataacttt | ttccttctca | tactcataag | ttgtaaaggc | acagcgggaa | taagggaaaa | 1920 |
| .......... | .......... | ...... | Ampicillin(0-300) | ...... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | ttgcggcatt | ttgccttcct | gtttttgctc | acccagaaac | gctggtgaaa | gtaaaagatg | 1980 |
| 1921 | aacgccgtaa | aacggaagga | caaaaacgag | tgggtctttg | cgaccacttt | cattttctac | 1980 |
| .......... | ...... | Ampicillin(0-300) | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | ctgaagatca | gttgggtgca | cgagtgggtt | acatcgaact | ggatctcaac | agcggtaaga | 2040 |
| 1981 | gacttctagt | caacccacgt | gctcacccaa | tgtagcttga | cctagagttg | tcgccattct | 2040 |
| .......... | ...... | Ampicillin(0-300) | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | tccttgagag | ttttcgcccc | gaagaacgtt | ttccaatgat | gagcactttt | aaagttctgc | 2100 |
| 2041 | aggaactctc | aaaagcgggg | cttcttgcaa | aaggttacta | ctcgtgaaaa | tttcaagacg | 2100 |
| .......... | ...... | Ampicillin(0-300) | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | tatgtggcgc | ggtattatcc | cgtgttgacg | ccgggcaaga | gcaactcggt | cgccgcatac | 2160 |
| 2101 | atacaccgcg | ccataatagg | gcacaactgc | ggcccgttct | cgttgagcca | gcggcgtatg | 2160 |
| .......... | ...... | Ampicillin(0-300) | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | actattctca | gaatgacttg | gttgagtggg | ggggggggga | aagccacgtt | gtgtctcaaa | 2220 |
| 2161 | tgataagagt | cttactgaac | caactcaccc | ccccccccct | ttcggtgcaa | cacagagttt | 2220 |
| Ampicillin(0-300) | .. | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | atctctgatg | ttacattgca | caagataaaa | atatatcatc | atgaacaata | aaactgtctg | 2280 |
| 2221 | tagagactac | aatgtaacgt | gttctatttt | tatatagtag | tacttgttat | tttgacagac | 2280 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | XhoI(2339) |
| 2281 | cttacataaa | cagtaataca | aggggtgtta | tgagccatat | tcaacgggaa | acgtcttgct | 2340 |
| 2281 | gaatgtattt | gtcattatgt | tccccacaat | actcggtata | agttgccctt | tgcagaacga | 2340 |
| .......... | .......... | .......... | ......... | ORF 3 KanR2 | ......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | cgaggccgcg | attaaattcc | aacatggatg | ctgatttata | tgggtataaa | tgggctcgcg | 2400 |
| 2341 | gctccggcgc | taatttaagg | ttgtacctac | gactaaatat | acccatattt | acccgagcgc | 2400 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | ataatgtcgg | gcaatcaggt | gcgacaatct | atcgattgta | tgggaagccc | gatgcgccag | 2460 |
| 2401 | tattacagcc | cgttagtcca | cgctgttaga | tagctaacat | acccttcggg | ctacgcggtc | 2460 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | agttgtttct | gaaacatggc | aaaggtagcg | ttgccaatga | tgttacagat | gagatggtca | 2520 |
| 2461 | tcaacaaaga | ctttgtaccg | tttccatcgc | aacggttact | acaatgtcta | ctctaccagt | 2520 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2521 | gactaaactg | gctgacggaa | tttatgcctc | ttccgaccat | caagcatttt | atccgtactc | 2580 |
| 2521 | ctgatttgac | cgactgcctt | aaatacggag | aaggctggta | gttcgtaaaa | taggcatgag | 2580 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | ctgatgatgc | atggttactc | accactgcga | tccccgggaa | aacagcattc | caggtattag | 2640 |
| 2581 | gactactacg | taccaatgag | tggtgacgct | aggggccctt | ttgtcgtaag | gtccataatc | 2640 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | aagaatatcc | tgattcaggt | gaaaatattg | ttgatgcgct | ggcagtgttc | ctgcgccggt | 2700 |
| 2641 | ttcttatagg | actaagtcca | cttttataac | aactacgcga | ccgtcacaag | gacgcggcca | 2700 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | tgcattcgat | tcctgtttgt | aattgtcctt | ttaacagcga | tcgcgtattt | cgtctcgctc | 2760 |
| 2701 | acgtaagcta | aggacaaaca | ttaacaggaa | aattgtcgct | agcgcataaa | gcagagcgag | 2760 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2761 | aggcgcaatc | acgaatgaat | aacggtttgg | ttgatgcgag | tgattttgat | gacgagcgta | 2820 |
| 2761 | tccgcgttag | tgcttactta | ttgccaaacc | aactacgctc | actaaaacta | ctgctcgcat | 2820 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2821 | atggctggcc | tgttgaacaa | gtctggaaag | aaatgcataa | gcttttgcca | ttctcaccgg | 2880 |
| 2821 | taccgaccgg | acaacttgtt | cagacctttc | tttacgtatt | cgaaaacggt | aagagtggcc | 2880 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | AseI(2940) |
| 2881 | attcagtcgt | cactcatggt | gatttctcac | ttgataacct | tatttttgac | gaggggaaat | 2940 |
| 2881 | taagtcagca | gtgagtacca | ctaaagagtg | aactattgga | ataaaaactg | ctccccttta | 2940 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2941 | taataggttg | tattgatgtt | ggacgagtcg | gaatcgcaga | ccgataccag | gatcttgcca | 3000 |
| 2941 | attatccaac | ataactacaa | cctgctcagc | cttagcgtct | ggctatggtc | ctagaacggt | 3000 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | tcctatggaa | ctgcctcggt | gagttttctc | cttcattaca | gaaacggctt | tttcaaaaat | 3060 |
| 3001 | aggatacctt | gacggagcca | ctcaaaagag | gaagtaatgt | ctttgccgaa | aaagttttta | 3060 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | atggtattga | taatcctgat | atgaataaat | tgcagtttca | tttgatgctc | gatgagtttt | 3120 |
| 3061 | taccataact | attaggacta | tacttattta | acgtcaaagt | aaactacgag | ctactcaaaa | 3120 |
| .......... | ......... | ORF 3 KanR2 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | tctaatcaga | attggttaat | tggttgtaac | actggcagag | cattacgctg | acttgacggg | 3180 |
| 3121 | agattagtct | taaccaatta | accaacattg | tgaccgtctc | gtaatgcgac | tgaactgccc | 3180 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | acggcggctt | tgttgaataa | atcgaacttt | tgctgagttg | aaggatcaga | tcacgcatct | 3240 |
| 3181 | tgccgccgaa | acaacttatt | tagcttgaaa | acgactcaac | ttcctagtct | agtgcgtaga | 3240 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | tcccgacaac | gcagaccgtt | ccgtggcaaa | gcaaaagttc | aaaatcacca | actggtccac | 3300 |
| 3241 | agggctgttg | cgtctggcaa | ggcaccgttt | cgttttcaag | ttttagtggt | tgaccaggtg | 3300 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | ctacaacaaa | gctctcatca | accgtggctc | cctcactttc | tggctggatg | atggggcgat | 3360 |
| 3301 | gatgttgttt | cgagagtagt | tggcaccgag | ggagtgaaag | accgacctac | taccccgcta | 3360 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| StuI(3365) | .......... | .......... | .......... | .......... | .......... |
| 3361 | tcaggcctgg | tatgagtcag | caacaccttc | ttcacgaggc | agacctcagc | gccccccccc | 3420 |
| 3361 | agtccggacc | atactcagtc | gttgtggaag | aagtgctccg | tctggagtcg | cggggggggg | 3420 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | ccctcgcggt | atcattgcag | cactggggcc | agatggtaag | ccctcccgta | tcgtagttat | 3480 |
| 3421 | gggagcgcca | tagtaacgtc | gtgaccccgg | tctaccattc | gggagggcat | agcatcaata | 3480 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | ctacacgacg | gggagtcagg | caactatgga | tgaacgaaat | agacagatcg | ctgagatagg | 3540 |
| 3481 | gatgtgctgc | ccctcagtcc | gttgatacct | acttgcttta | tctgtctagc | gactctatcc | 3540 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | tgcctcactg | attaagcatt | ggtaactgtc | agaccaagtt | tactcatata | tactttagat | 3600 |
| 3541 | acggagtgac | taattcgtaa | ccattgacag | tctggttcaa | atgagtatat | atgaaatcta | 3600 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | tgatttacgc | gccctgtagc | ggcgcattaa | gcgcggcggg | tgtggtggtt | acgcgcagcg | 3660 |
| 3601 | actaaatgcg | cgggacatcg | ccgcgtaatt | cgcgccgccc | acaccaccaa | tgcgcgtcgc | 3660 |
| .......... | .......... | .......... | .......... | f1_origin | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | tgaccgctac | acttgccagc | gccctagcgc | ccgctccttt | cgctttcttc | ccttcctttc | 3720 |
| 3661 | actggcgatg | tgaacggtcg | cgggatcgcg | ggcgaggaaa | gcgaaagaag | ggaaggaaag | 3720 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | tcgccacgtt | cgccggcttt | ccccgtcaag | ctctaaatcg | ggggctccct | ttagggttcc | 3780 |
| 3721 | agcggtgcaa | gcggccgaaa | ggggcagttc | gagatttagc | ccccgaggga | aatcccaagg | 3780 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | gatttagtgc | tttacggcac | ctcgacccca | aaaaacttga | tttgggtgat | ggttcacgta | 3840 |
| 3781 | ctaaatcacg | aaatgccgtg | gagctggggt | tttttgaact | aaacccacta | ccaagtgcat | 3840 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | gtgggccatc | gccctgatag | acggtttttc | gccctttgac | gttggagtcc | acgttcttta | 3900 |
| 3841 | cacccggtag | cgggactatc | tgccaaaaag | cgggaaactg | caacctcagg | tgcaagaaat | 3900 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | atagtggact | cttgttccaa | acttgaacaa | cactcaaccc | tatctcgggc | tattcttttg | 3960 |
| 3901 | tatcacctga | gaacaaggtt | tgaacttgtt | gtgagttggg | atagagcccg | ataagaaaac | 3960 |
| .......... | f1_origin | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | atttataagg | gattttgccg | atttcggcct | attggttaaa | aaatgagctg | atttaacaaa | 4020 |
| 3961 | taaatattcc | ctaaaacggc | taaagccgga | taaccaattt | tttactcgac | taaattgttt | 4020 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4021 | aatttaacgc | gaattttaac | aaaatattaa | cgtttacaat | ttaaaaggat | ctaggtgaag | 4080 |
| 4021 | ttaaattgcg | cttaaaattg | ttttataatt | gcaaatgtta | aattttccta | gatccacttc | 4080 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | atcctttttg | ataatctcat | gaccaaaatc | ccttaacgtg | agttttcgtt | ccactgagcg | 4140 |
| 4081 | taggaaaaac | tattagagta | ctggttttag | ggaattgcac | tcaaaagcaa | ggtgactcgc | 4140 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | tcagaccccg | tagaaaagat | caaaggatct | tcttgagatc | ctttttttct | gcgcgtaatc | 4200 |
| 4141 | agtctggggc | atcttttcta | gtttcctaga | agaactctag | gaaaaaaaga | cgcgcattag | 4200 |
| .......... | .......... | ........ | pBR322_origin | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | tgctgcttgc | aaacaaaaaa | accaccgcta | ccagcggtgg | tttgtttgcc | ggatcaagag | 4260 |
| 4201 | acgacgaacg | tttgtttttt | tggtggcgat | ggtcgccacc | aaacaaacgg | cctagttctc | 4260 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | ctaccaactc | tttttccgaa | ggtaactggc | ttcagcagag | cgcagatacc | aaatactgtc | 4320 |
| 4261 | gatggttgag | aaaaaggctt | ccattgaccg | aagtcgtctc | gcgtctatgg | tttatgacag | 4320 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | cttctagtgt | agccgtagtt | aggccaccac | ttcaagaact | ctgtagcacc | gcctacatac | 4380 |
| 4321 | gaagatcaca | tcggcatcaa | tccggtggtg | aagttcttga | gacatcgtgg | cggatgtatg | 4380 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | ctcgctctgc | taatcctgtt | accagtggct | gctgccagtg | gcgataagtc | gtgtcttacc | 4440 |
| 4381 | gagcgagacg | attaggacaa | tggtcaccga | cgacggtcac | cgctattcag | cacagaatgg | 4440 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | gggttggact | caagacgata | gttaccggat | aaggcgcagc | ggtcgggctg | aacggggggt | 4500 |
| 4441 | cccaacctga | gttctgctat | caatggccta | ttccgcgtcg | ccagcccgac | ttgcccccca | 4500 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4501 | tcgtgcacac | agcccagctt | ggagcgaacg | acctacaccg | aactgagata | cctacagcgt | 4560 |
| 4501 | agcacgtgtg | tcgggtcgaa | cctcgcttgc | tggatgtggc | ttgactctat | ggatgtcgca | 4560 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4561 | gagctatgag | aaagcgccac | gcttcccgaa | gggagaaagg | cggacaggta | tccggtaagc | 4620 |
| 4561 | ctcgatactc | tttcgcggtg | cgaagggctt | ccctctttcc | gcctgtccat | aggccattcg | 4620 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4621 | ggcagggtcg | gaacaggaga | gcgcacgagg | gagcttccag | ggggaaacgc | ctggtatctt | 4680 |
| 4621 | ccgtcccagc | cttgtcctct | cgcgtgctcc | ctcgaaggtc | cccctttgcg | gaccatagaa | 4680 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4681 | tatagtcctg | tcgggtttcg | ccacctctga | cttgagcgtc | gatttttgtg | atgctcgtca | 4740 |
| 4681 | atatcaggac | agcccaaagc | ggtggagact | gaactcgcag | ctaaaaacac | tacgagcagt | 4740 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4741 | ggggggcgga | gcctatggaa | aaacgccagc | aacgcggcct | ttttacggtt | cctggccttt | 4800 |
| 4741 | ccccccgcct | cggatacctt | tttgcggtcg | ttgcgccgga | aaaatgccaa | ggaccggaaa | 4800 |
| ........ | pBR322_origin | ........ | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4801 | tgctggcctt | ttgctcacat | gttctttcct | gcgttatccc | ctgattctgt | ggataaccgt | 4860 |
| 4801 | acgaccggaa | aacgagtgta | caagaaagga | cgcaataggg | gactaagaca | cctattggca | 4860 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4861 | attaccgcct | ttgagtgagc | tgataccgct | cgccgcagcc | gaacgaccga | gcgcagcgag | 4920 |
| 4861 | taatggcgga | aactcactcg | actatggcga | gcggcgtcgg | cttgctggct | cgcgtcgctc | 4920 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4921 | tcagtgagcg | aggaagcgga | agagcgcctg | atgcggtatt | ttctccttac | gcatctgtgc | 4980 |
| 4921 | agtcactcgc | tccttcgcct | tctcgcggac | tacgccataa | aagaggaatg | cgtagacacg | 4980 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | NdeI(4996) | .......... | .......... | .......... | .......... |
| 4981 | ggtatttcac | accgcatatg | gtgcactctc | agtacaatct | gctctgatgc | cgcatagtta | 5040 |
| 4981 | ccataaagtg | tggcgtatac | cacgtgagag | tcatgttaga | cgagactacg | gcgtatcaat | 5040 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5041 | agccagtata | cactccgcta | tcgctacgtg | actgggtcat | ggctgcgccc | cgacacccgc | 5100 |
| 5041 | tcggtcatat | gtgaggcgat | agcgatgcac | tgacccagta | ccgacgcggg | gctgtgggcg | 5100 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5101 | caacacccgc | tgacgcgccc | tgacgggctt | gtctgctccc | ggcatccgct | tacagacaag | 5160 |
| 5101 | gttgtgggcg | actgcgcggg | actgcccgaa | cagacgaggg | ccgtaggcga | atgtctgttc | 5160 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5161 | ctgtgaccgt | ctccgggagc | tgcatgtgtc | agaggttttc | accgtcatca | ccgaaacgcg | 5220 |
| 5161 | gacactggca | gaggccctcg | acgtacacag | tctccaaaag | tggcagtagt | ggctttgcgc | 5220 |
| .......... | .......... | pGEX_3_pri | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5221 | cgaggcagca | aggagatggc | gcccaacagt | cccccggcca | cggggcctgc | caccataccc | 5280 |
| 5221 | gctccgtcgt | tcctctaccg | cgggttgtca | gggggccggt | gccccggacg | gtggtatggg | 5280 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5281 | acgccgaaac | aagcgctcat | gagcccgaag | tggcgagccc | gatcttcccc | atcggtgatg | 5340 |
| 5281 | tgcggctttg | ttcgcgagta | ctcgggcttc | accgctcggg | ctagaagggg | tagccactac | 5340 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5341 | tcggcgatat | aggcgccagc | aaccgcacct | gtggcgccgg | tgatgccggc | cacgatgcgt | 5400 |
| 5341 | agccgctata | tccgcggtcg | ttggcgtgga | caccgcggcc | actacggccg | gtgctacgca | 5400 |
| pBRrevBam_pri | ...... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5401 | ccggcgtaga | ggatctgctc | atgtttgaca | gcttatc... | .......... | .......... | 5437 |
| 5401 | ggccgcatct | cctagacgag | tacaaactgt | cgaatag... | .......... | .......... | 5437 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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