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Sequence of pBK-CMV
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and then use BVTech Plasmid to view and edit the file.
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View the plasmid map on line
Sequence of pBK-CMV
: 4518 BP; 1100 A; 1147 C; 1170 G; 1101 T; 0 other; |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1 | cacctgacgc | gccctgtagc | ggcgcattaa | gcgcggcggg | tgtggtggtt | acgcgcagcg | 60 |
| 1 | gtggactgcg | cgggacatcg | ccgcgtaatt | cgcgccgccc | acaccaccaa | tgcgcgtcgc | 60 |
| .......... | .......... | .......... | .......... | f1_origin | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | tgaccgctac | acttgccagc | gccctagcgc | ccgctccttt | cgctttcttc | ccttcctttc | 120 |
| 61 | actggcgatg | tgaacggtcg | cgggatcgcg | ggcgaggaaa | gcgaaagaag | ggaaggaaag | 120 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | tcgccacgtt | cgccggcttt | ccccgtcaag | ctctaaatcg | ggggctccct | ttagggttcc | 180 |
| 121 | agcggtgcaa | gcggccgaaa | ggggcagttc | gagatttagc | ccccgaggga | aatcccaagg | 180 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 181 | gatttagtgc | tttacggcac | ctcgacccca | aaaaacttga | ttagggtgat | ggttcacgta | 240 |
| 181 | ctaaatcacg | aaatgccgtg | gagctggggt | tttttgaact | aatcccacta | ccaagtgcat | 240 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 241 | gtgggccatc | gccctgatag | acggtttttc | gccctttgac | gttggagtcc | acgttcttta | 300 |
| 241 | cacccggtag | cgggactatc | tgccaaaaag | cgggaaactg | caacctcagg | tgcaagaaat | 300 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | atagtggact | cttgttccaa | actggaacaa | cactcaaccc | tatctcggtc | tattcttttg | 360 |
| 301 | tatcacctga | gaacaaggtt | tgaccttgtt | gtgagttggg | atagagccag | ataagaaaac | 360 |
| .......... | f1_origin | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | atttataagg | gattttgccg | atttcggcct | attggttaaa | aaatgagctg | atttaacaaa | 420 |
| 361 | taaatattcc | ctaaaacggc | taaagccgga | taaccaattt | tttactcgac | taaattgttt | 420 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | aatttaacgc | gaattttaac | aaaatattaa | cgcttacaat | ttacgcgtta | agatacattg | 480 |
| 421 | ttaaattgcg | cttaaaattg | ttttataatt | gcgaatgtta | aatgcgcaat | tctatgtaac | 480 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | atgagtttgg | acaaaccaca | actagaatgc | agtgaaaaaa | atgctttatt | tgtgaaattt | 540 |
| 481 | tactcaaacc | tgtttggtgt | tgatcttacg | tcactttttt | tacgaaataa | acactttaaa | 540 |
| EBV_rev_pri | ........ | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 541 | gtgatgctat | tgctttattt | gtaaccatta | taagctgcaa | taaacaagtt | aacaacaaca | 600 |
| 541 | cactacgata | acgaaataaa | cattggtaat | attcgacgtt | atttgttcaa | ttgttgttgt | 600 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 601 | attgcattca | ttttatgttt | caggttcagg | gggaggtgtg | ggaggttttt | taaagcaagt | 660 |
| 601 | taacgtaagt | aaaatacaaa | gtccaagtcc | ccctccacac | cctccaaaaa | atttcgttca | 660 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | BclI(692) | .......... | .......... |
| 661 | aaaacctcta | caaatgtggt | atggctgatt | atgatcatga | acagactgtg | aggactgagg | 720 |
| 661 | ttttggagat | gtttacacca | taccgactaa | tactagtact | tgtctgacac | tcctgactcc | 720 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | ggcctgaaat | gagccttggg | actgtgaatc | taaaatacac | aaacaattag | aatcagtagt | 780 |
| 721 | ccggacttta | ctcggaaccc | tgacacttag | attttatgtg | tttgttaatc | ttagtcatca | 780 |
| .......... | .......... | .......... | ........ | SV40_3_splice | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 781 | ttaacacatt | atacacttaa | aaattggatc | tccattcgcc | attcaggctg | cgcaactgtt | 840 |
| 781 | aattgtgtaa | tatgtgaatt | tttaacctag | aggtaagcgg | taagtccgac | gcgttgacaa | 840 |
| ........ | SV40_3_splice | ........ | .......... | .......... | lacZ_a |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | gggaagggcg | atcggtgcgg | gcctcttcgc | tattacgcca | gctggcgaaa | gggggatgtg | 900 |
| 841 | cccttcccgc | tagccacgcc | cggagaagcg | ataatgcggt | cgaccgcttt | ccccctacac | 900 |
| .......... | .......... | lacZ_a | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | ctgcaaggcg | attaagttgg | gtaacgccag | ggttttccca | gtcacgacgt | tgtaaaacga | 960 |
| 901 | gacgttccgc | taattcaacc | cattgcggtc | ccaaaagggt | cagtgctgca | acattttgct | 960 |
| .......... | .......... | lacZ_a | ... | M13_pUC_fwd_pri | M13_forward20_pri |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | cggccagtga | attgtaatac | gactcactat | agggcgaatt | gggtacactt | acctggtacc | 1020 |
| 961 | gccggtcact | taacattatg | ctgagtgata | tcccgcttaa | cccatgtgaa | tggaccatgg | 1020 |
| lacZ_a | .......... | T7_pro | .......... | .......... | .......... |
| SmaI | | ApaI,SacII),NotI(1049) | XbaI(1056) | XhoI(1068) | |
| 1021 | ccacccgggt | ggaaaatcga | tgggcccgcg | gccgctctag | aagtactctc | gagaagcttt | 1080 |
| 1021 | ggtgggccca | ccttttagct | acccgggcgc | cggcgagatc | ttcatgagag | ctcttcgaaa | 1080 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| EcoRI | BamHI SpeI | SalI(1104) | PstI(1114) | SacI(1126) | |
| 1081 | ttgaattctt | tggatccact | agtgtcgacc | tgcaggcgcg | cgagctccag | cttttgttcc | 1140 |
| 1081 | aacttaagaa | acctaggtga | tcacagctgg | acgtccgcgc | gctcgaggtc | gaaaacaagg | 1140 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | ctttagtgag | ggttaatttc | gagcttggcg | taatcaaggt | catagctgtt | tcctgtgtga | 1200 |
| 1141 | gaaatcactc | ccaattaaag | ctcgaaccgc | attagttcca | gtatcgacaa | aggacacact | 1200 |
| T3_pro | .......... | .......... | .......... | ....... | M13_pUC_rev_pri |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | aattgttatc | cgctcacaat | tccacacaat | atacgagccg | gaagtataaa | gtgtaaagcc | 1260 |
| 1201 | ttaacaatag | gcgagtgtta | aggtgtgtta | tatgctcggc | cttcatattt | cacatttcgg | 1260 |
| M13_pUC_rev_pri | .... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | NheI(1300) | .......... | .......... |
| 1261 | tggggtgcct | aatgagtgag | ctaactcaca | gtaattgcgg | ctagcggatc | tgacggttca | 1320 |
| 1261 | accccacgga | ttactcactc | gattgagtgt | cattaacgcc | gatcgcctag | actgccaagt | 1320 |
| .......... | .......... | .......... | .......... | .......... | CMV_pro |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1321 | ctaaaccagc | tctgcttata | tagacctccc | accgtacacg | cctaccgccc | atttgcgtca | 1380 |
| 1321 | gatttggtcg | agacgaatat | atctggaggg | tggcatgtgc | ggatggcggg | taaacgcagt | 1380 |
| .......... | ...... | CMV_pro | CMV_immearly_pro | CMV_fwd_pri | ...... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1381 | atggggcgga | gttgttacga | cattttggaa | agtcccgttg | attttggtgc | caaaacaaac | 1440 |
| 1381 | taccccgcct | caacaatgct | gtaaaacctt | tcagggcaac | taaaaccacg | gttttgtttg | 1440 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1441 | tcccattgac | gtcaatgggg | tggagacttg | gaaatccccg | tgagtcaaac | cgctatccac | 1500 |
| 1441 | agggtaactg | cagttacccc | acctctgaac | ctttaggggc | actcagtttg | gcgataggtg | 1500 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | gcccattgat | gtactgccaa | aaccgcatca | ccatggtaat | agcgatgact | aatacgtaga | 1560 |
| 1501 | cgggtaacta | catgacggtt | ttggcgtagt | ggtaccatta | tcgctactga | ttatgcatct | 1560 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | CAG_enh |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1561 | tgtactgcca | agtaggaaag | tcccataagg | tcatgtactg | ggcataatgc | caggcgggcc | 1620 |
| 1561 | acatgacggt | tcatcctttc | agggtattcc | agtacatgac | ccgtattacg | gtccgcccgg | 1620 |
| .......... | ... | CMV_immearly_pro CAG_enh | ... | .......... | .......... |
| .......... | .......... | .......... | NdeI(1659) | .......... | .......... |
| 1621 | atttaccgtc | attgacgtca | atagggggcg | tacttggcat | atgatacact | tgatgtactg | 1680 |
| 1621 | taaatggcag | taactgcagt | tatcccccgc | atgaaccgta | tactatgtga | actacatgac | 1680 |
| .......... | ... | CMV_immearly_pro CAG_enh | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1681 | ccaagtgggc | agtttaccgt | aaatactcca | cccattgacg | tcaatggaaa | gtccctattg | 1740 |
| 1681 | ggttcacccg | tcaaatggca | tttatgaggt | gggtaactgc | agttaccttt | cagggataac | 1740 |
| .......... | ... | CMV_immearly_pro CAG_enh | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | gcgttactat | gggaacatac | gtcattattg | acgtcaatgg | gcgggggtcg | ttgggcggtc | 1800 |
| 1741 | cgcaatgata | cccttgtatg | cagtaataac | tgcagttacc | cgcccccagc | aacccgccag | 1800 |
| .......... | ... | CMV_immearly_pro CAG_enh | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | agccaggcgg | gccatttacc | gtaagttatg | taacgcggaa | ctccatatat | gggctatgaa | 1860 |
| 1801 | tcggtccgcc | cggtaaatgg | cattcaatac | attgcgcctt | gaggtatata | cccgatactt | 1860 |
| ....... | CAG_enh | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | AseI(1886) | .......... | .......... | .......... |
| 1861 | ctaatgaccc | cgtaattgat | tactattaat | aactaatgca | tggcggtaat | acggttatcc | 1920 |
| 1861 | gattactggg | gcattaacta | atgataatta | ttgattacgt | accgccatta | tgccaatagg | 1920 |
| ....... | CMV_immearly_pro | ....... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | acagaatcag | gggataacgc | aggaaagaac | atgtgagcaa | aaggccagca | aaaggccagg | 1980 |
| 1921 | tgtcttagtc | ccctattgcg | tcctttcttg | tacactcgtt | ttccggtcgt | tttccggtcc | 1980 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | aaccgtaaaa | aggccgcgtt | gctggcgttt | ttccataggc | tccgcccccc | tgacgagcat | 2040 |
| 1981 | ttggcatttt | tccggcgcaa | cgaccgcaaa | aaggtatccg | aggcgggggg | actgctcgta | 2040 |
| .......... | .......... | ........ | pBR322_origin | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | cacaaaaatc | gacgctcaag | tcagaggtgg | cgaaacccga | caggactata | aagataccag | 2100 |
| 2041 | gtgtttttag | ctgcgagttc | agtctccacc | gctttgggct | gtcctgatat | ttctatggtc | 2100 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | gcgtttcccc | ctggaagctc | cctcgtgcgc | tctcctgttc | cgaccctgcc | gcttaccgga | 2160 |
| 2101 | cgcaaagggg | gaccttcgag | ggagcacgcg | agaggacaag | gctgggacgg | cgaatggcct | 2160 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | tacctgtccg | cctttctccc | ttcgggaagc | gtggcgcttt | ctcatagctc | acgctgtagg | 2220 |
| 2161 | atggacaggc | ggaaagaggg | aagcccttcg | caccgcgaaa | gagtatcgag | tgcgacatcc | 2220 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | ......... | ApaLI(2263) | ......... |
| 2221 | tatctcagtt | cggtgtaggt | cgttcgctcc | aagctgggct | gtgtgcacga | accccccgtt | 2280 |
| 2221 | atagagtcaa | gccacatcca | gcaagcgagg | ttcgacccga | cacacgtgct | tggggggcaa | 2280 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | cagcccgacc | gctgcgcctt | atccggtaac | tatcgtcttg | agtccaaccc | ggtaagacac | 2340 |
| 2281 | gtcgggctgg | cgacgcggaa | taggccattg | atagcagaac | tcaggttggg | ccattctgtg | 2340 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | gacttatcgc | cactggcagc | agccactggt | aacaggatta | gcagagcgag | gtatgtaggc | 2400 |
| 2341 | ctgaatagcg | gtgaccgtcg | tcggtgacca | ttgtcctaat | cgtctcgctc | catacatccg | 2400 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | ggtgctacag | agttcttgaa | gtggtggcct | aactacggct | acactagaag | gacagtattt | 2460 |
| 2401 | ccacgatgtc | tcaagaactt | caccaccgga | ttgatgccga | tgtgatcttc | ctgtcataaa | 2460 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | ggtatctgcg | ctctgctgaa | gccagttacc | ttcggaaaaa | gagttggtag | ctcttgatcc | 2520 |
| 2461 | ccatagacgc | gagacgactt | cggtcaatgg | aagccttttt | ctcaaccatc | gagaactagg | 2520 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2521 | ggcaaacaaa | ccaccgctgg | tagcggtggt | ttttttgttt | gcaagcagca | gattacgcgc | 2580 |
| 2521 | ccgtttgttt | ggtggcgacc | atcgccacca | aaaaaacaaa | cgttcgtcgt | ctaatgcgcg | 2580 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | agaaaaaaag | gatctcaaga | agatcctttg | atcttttcta | cggggtctga | cgctcagtgg | 2640 |
| 2581 | tctttttttc | ctagagttct | tctaggaaac | tagaaaagat | gccccagact | gcgagtcacc | 2640 |
| ........ | pBR322_origin | ........ | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | aacgaaaact | cacgttaagg | gattttggtc | atgagattat | caaaaaggat | cttcacctag | 2700 |
| 2641 | ttgcttttga | gtgcaattcc | ctaaaaccag | tactctaata | gtttttccta | gaagtggatc | 2700 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | atccttttaa | attaaaaatg | aagttttaaa | tcaatctaaa | gtatatatga | gtaacctgag | 2760 |
| 2701 | taggaaaatt | taatttttac | ttcaaaattt | agttagattt | catatatact | cattggactc | 2760 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2761 | gctatggcag | ggcctgccgc | cccgacgttg | gctgcgagcc | ctgggccttc | acccgaactt | 2820 |
| 2761 | cgataccgtc | ccggacggcg | gggctgcaac | cgacgctcgg | gacccggaag | tgggcttgaa | 2820 |
| .......... | .......... | .......... | TK_PA_term | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2821 | ggggggtggg | gtggggaaaa | ggaagaaacg | cgggcgtatt | ggccccaatg | gggtctcggt | 2880 |
| 2821 | ccccccaccc | cacccctttt | ccttctttgc | gcccgcataa | ccggggttac | cccagagcca | 2880 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2881 | ggggtatcga | cagagtgcca | gccctgggac | cgaaccccgc | gtttatgaac | aaacgaccca | 2940 |
| 2881 | ccccatagct | gtctcacggt | cgggaccctg | gcttggggcg | caaatacttg | tttgctgggt | 2940 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2941 | acaccgtgcg | ttttattctg | tctttttatt | gccgtcatag | cgcgggttcc | ttccggtatt | 3000 |
| 2941 | tgtggcacgc | aaaataagac | agaaaaataa | cggcagtatc | gcgcccaagg | aaggccataa | 3000 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | gtctccttcc | gtgtttcagt | tagcctcccc | ctagggtggg | cgaagaactc | cagcatgaga | 3060 |
| 3001 | cagaggaagg | cacaaagtca | atcggagggg | gatcccaccc | gcttcttgag | gtcgtactct | 3060 |
| .......... | TK_PA_term | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | tccccgcgct | ggaggatcat | ccagccggcg | tcccggaaaa | cgattccgaa | gcccaacctt | 3120 |
| 3061 | aggggcgcga | cctcctagta | ggtcggccgc | agggcctttt | gctaaggctt | cgggttggaa | 3120 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | tcatagaagg | cggcggtgga | atcgaaatct | cgtgatggca | ggttgggcgt | cgcttggtcg | 3180 |
| 3121 | agtatcttcc | gccgccacct | tagctttaga | gcactaccgt | ccaacccgca | gcgaaccagc | 3180 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| BstBI(3187) | ........ | .......... | .......... | .......... | .......... |
| 3181 | gtcatttcga | accccagagt | cccgctcaga | agaactcgtc | aagaaggcga | tagaaggcga | 3240 |
| 3181 | cagtaaagct | tggggtctca | gggcgagtct | tcttgagcag | ttcttccgct | atcttccgct | 3240 |
| .......... | .......... | .......... | ... | ORF 2 Neomycin(variant) | ... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | tgcgctgcga | atcgggagcg | gcgataccgt | aaagcacgag | gaagcggtca | gcccattcgc | 3300 |
| 3241 | acgcgacgct | tagccctcgc | cgctatggca | tttcgtgctc | cttcgccagt | cgggtaagcg | 3300 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | cgccaagctc | ttcagcaata | tcacgggtag | ccaacgctat | gtcctgatag | cggtccgcca | 3360 |
| 3301 | gcggttcgag | aagtcgttat | agtgcccatc | ggttgcgata | caggactatc | gccaggcggt | 3360 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | cacccagccg | gccacagtcg | atgaatccag | aaaagcggcc | attttccacc | atgatattcg | 3420 |
| 3361 | gtgggtcggc | cggtgtcagc | tacttaggtc | ttttcgccgg | taaaaggtgg | tactataagc | 3420 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | gcaagcaggc | atcgccatgg | gtcacgacga | gatcctcgcc | gtcgggcatg | ctcgccttga | 3480 |
| 3421 | cgttcgtccg | tagcggtacc | cagtgctgct | ctaggagcgg | cagcccgtac | gagcggaact | 3480 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | gcctggcgaa | cagttcggct | ggcgcgagcc | cctgatgctc | ttcgtccaga | tcatcctgat | 3540 |
| 3481 | cggaccgctt | gtcaagccga | ccgcgctcgg | ggactacgag | aagcaggtct | agtaggacta | 3540 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | cgacaagacc | ggcttccatc | cgagtacgtg | ctcgctcgat | gcgatgtttc | gcttggtggt | 3600 |
| 3541 | gctgttctgg | ccgaaggtag | gctcatgcac | gagcgagcta | cgctacaaag | cgaaccacca | 3600 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | cgaatgggca | ggtagccgga | tcaagcgtat | gcagccgccg | cattgcatca | gccatgatgg | 3660 |
| 3601 | gcttacccgt | ccatcggcct | agttcgcata | cgtcggcggc | gtaacgtagt | cggtactacc | 3660 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | atactttctc | ggcaggagca | aggtgagatg | acaggagatc | ctgccccggc | acttcgccca | 3720 |
| 3661 | tatgaaagag | ccgtcctcgt | tccactctac | tgtcctctag | gacggggccg | tgaagcgggt | 3720 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | atagcagcca | gtcccttccc | gcttcagtga | caacgtcgag | cacagctgcg | caaggaacgc | 3780 |
| 3721 | tatcgtcggt | cagggaaggg | cgaagtcact | gttgcagctc | gtgtcgacgc | gttccttgcg | 3780 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | ccgtcgtggc | cagccacgat | agccgcgctg | cctcgtcttg | cagttcattc | agggcaccgg | 3840 |
| 3781 | ggcagcaccg | gtcggtgcta | tcggcgcgac | ggagcagaac | gtcaagtaag | tcccgtggcc | 3840 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | NarI(3869) | .......... | .......... | .......... |
| 3841 | acaggtcggt | cttgacaaaa | agaaccgggc | gcccctgcgc | tgacagccgg | aacacggcgg | 3900 |
| 3841 | tgtccagcca | gaactgtttt | tcttggcccg | cggggacgcg | actgtcggcc | ttgtgccgcc | 3900 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | catcagagca | gccgattgtc | tgttgtgccc | agtcatagcc | gaatagcctc | tccacccaag | 3960 |
| 3901 | gtagtctcgt | cggctaacag | acaacacggg | tcagtatcgg | cttatcggag | aggtgggttc | 3960 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | cggccggaga | acctgcgtgc | aatccatctt | gttcaatcat | gcgaaacgat | cctcatcctg | 4020 |
| 3961 | gccggcctct | tggacgcacg | ttaggtagaa | caagttagta | cgctttgcta | ggagtaggac | 4020 |
| ... | ORF 2 Neomycin(variant) | ... | .......... | .......... | .......... |
| .......... | .......... | StuI(4050) | .......... | .......... | .......... |
| 4021 | tctcttgatc | gatctttgca | aaagcctagg | cctccaaaaa | agcctcctca | ctacttctgg | 4080 |
| 4021 | agagaactag | ctagaaacgt | tttcggatcc | ggaggttttt | tcggaggagt | gatgaagacc | 4080 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | aatagctcag | aggccgaggc | ggcctcggcc | tctgcataaa | taaaaaaaat | tagtcagcca | 4140 |
| 4081 | ttatcgagtc | tccggctccg | ccggagccgg | agacgtattt | atttttttta | atcagtcggt | 4140 |
| .......... | .......... | ... | SV40_pro SV40pro_F_pri | SV40_origin | ... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | tggggcggag | aatgggcgga | actgggcgga | gttaggggcg | ggatgggcgg | agttaggggc | 4200 |
| 4141 | accccgcctc | ttacccgcct | tgacccgcct | caatccccgc | cctacccgcc | tcaatccccg | 4200 |
| .......... | ..... | SV40_pro SV40_origin | SV40_enh | ..... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | gggactatgg | ttgctgacta | attgagatgc | atgctttgca | tacttctgcc | tgctggggag | 4260 |
| 4201 | ccctgatacc | aacgactgat | taactctacg | tacgaaacgt | atgaagacgg | acgacccctc | 4260 |
| .......... | ...... | SV40_pro SV40_enh | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | cctggggact | ttccacacct | ggttgctgac | taattgagat | gcatgctttg | catacttctg | 4320 |
| 4261 | ggacccctga | aaggtgtgga | ccaacgactg | attaactcta | cgtacgaaac | gtatgaagac | 4320 |
| .......... | ...... | SV40_pro SV40_enh | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | cctgctgggg | agcctgggga | ctttccacac | cctaactgac | acacattcca | cagctggttc | 4380 |
| 4321 | ggacgacccc | tcggacccct | gaaaggtgtg | ggattgactg | tgtgtaaggt | gtcgaccaag | 4380 |
| ......... | SV40_pro | SV40_enh | pBABE_3_pri | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | tttccgcctc | aggactcttc | ctttttcaat | attattgaag | catttatcag | ggttattgtc | 4440 |
| 4381 | aaaggcggag | tcctgagaag | gaaaaagtta | taataacttc | gtaaatagtc | ccaataacag | 4440 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | tcatgagcgg | atacatattt | gaatgtattt | agaaaaataa | acaaataggg | gttccgcgca | 4500 |
| 4441 | agtactcgcc | tatgtataaa | cttacataaa | tctttttatt | tgtttatccc | caaggcgcgt | 4500 |
| .......... | AmpR_pro | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4501 | catttccccg | aaaagtgc.. | .......... | .......... | .......... | .......... | 4518 |
| 4501 | gtaaaggggc | ttttcacg.. | .......... | .......... | .......... | .......... | 4518 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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