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Sequence of pBK-RSV
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and then use BVTech Plasmid to view and edit the file.
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View the plasmid map on line
Sequence of pBK-RSV
: 4452 BP; 1078 A; 1158 C; 1129 G; 1087 T; 0 other; |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1 | cacctgacgc | gccctgtagc | ggcgcattaa | gcgcggcggg | tgtggtggtt | acgcgcagcg | 60 |
| 1 | gtggactgcg | cgggacatcg | ccgcgtaatt | cgcgccgccc | acaccaccaa | tgcgcgtcgc | 60 |
| .......... | .......... | .......... | .......... | f1_origin | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | tgaccgctac | acttgccagc | gccctagcgc | ccgctccttt | cgctttcttc | ccttcctttc | 120 |
| 61 | actggcgatg | tgaacggtcg | cgggatcgcg | ggcgaggaaa | gcgaaagaag | ggaaggaaag | 120 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | tcgccacgtt | cgccggcttt | ccccgtcaag | ctctaaatcg | ggggctccct | ttagggttcc | 180 |
| 121 | agcggtgcaa | gcggccgaaa | ggggcagttc | gagatttagc | ccccgaggga | aatcccaagg | 180 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 181 | gatttagtgc | tttacggcac | ctcgacccca | aaaaacttga | ttagggtgat | ggttcacgta | 240 |
| 181 | ctaaatcacg | aaatgccgtg | gagctggggt | tttttgaact | aatcccacta | ccaagtgcat | 240 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 241 | gtgggccatc | gccctgatag | acggtttttc | gccctttgac | gttggagtcc | acgttcttta | 300 |
| 241 | cacccggtag | cgggactatc | tgccaaaaag | cgggaaactg | caacctcagg | tgcaagaaat | 300 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | atagtggact | cttgttccaa | actggaacaa | cactcaaccc | tatctcggtc | tattcttttg | 360 |
| 301 | tatcacctga | gaacaaggtt | tgaccttgtt | gtgagttggg | atagagccag | ataagaaaac | 360 |
| .......... | f1_origin | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | atttataagg | gattttgccg | atttcggcct | attggttaaa | aaatgagctg | atttaacaaa | 420 |
| 361 | taaatattcc | ctaaaacggc | taaagccgga | taaccaattt | tttactcgac | taaattgttt | 420 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | aatttaacgc | gaattttaac | aaaatattaa | cgcttacaat | ttacgcgtta | agatacattg | 480 |
| 421 | ttaaattgcg | cttaaaattg | ttttataatt | gcgaatgtta | aatgcgcaat | tctatgtaac | 480 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | atgagtttgg | acaaaccaca | actagaatgc | agtgaaaaaa | atgctttatt | tgtgaaattt | 540 |
| 481 | tactcaaacc | tgtttggtgt | tgatcttacg | tcactttttt | tacgaaataa | acactttaaa | 540 |
| EBV_rev_pri | ........ | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 541 | gtgatgctat | tgctttattt | gtaaccatta | taagctgcaa | taaacaagtt | aacaacaaca | 600 |
| 541 | cactacgata | acgaaataaa | cattggtaat | attcgacgtt | atttgttcaa | ttgttgttgt | 600 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 601 | attgcattca | ttttatgttt | caggttcagg | gggaggtgtg | ggaggttttt | taaagcaagt | 660 |
| 601 | taacgtaagt | aaaatacaaa | gtccaagtcc | ccctccacac | cctccaaaaa | atttcgttca | 660 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | BclI(692) | .......... | .......... |
| 661 | aaaacctcta | caaatgtggt | atggctgatt | atgatcatga | acagactgtg | aggactgagg | 720 |
| 661 | ttttggagat | gtttacacca | taccgactaa | tactagtact | tgtctgacac | tcctgactcc | 720 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | ggcctgaaat | gagccttggg | actgtgaatc | taaaatacac | aaacaattag | aatcagtagt | 780 |
| 721 | ccggacttta | ctcggaaccc | tgacacttag | attttatgtg | tttgttaatc | ttagtcatca | 780 |
| .......... | .......... | .......... | ........ | SV40_3_splice | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 781 | ttaacacatt | atacacttaa | aaattggatc | tccattcgcc | attcaggctg | cgcaactgtt | 840 |
| 781 | aattgtgtaa | tatgtgaatt | tttaacctag | aggtaagcgg | taagtccgac | gcgttgacaa | 840 |
| ........ | SV40_3_splice | ........ | .......... | .......... | lacZ_a |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | gggaagggcg | atcggtgcgg | gcctcttcgc | tattacgcca | gctggcgaaa | gggggatgtg | 900 |
| 841 | cccttcccgc | tagccacgcc | cggagaagcg | ataatgcggt | cgaccgcttt | ccccctacac | 900 |
| .......... | .......... | lacZ_a | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | ctgcaaggcg | attaagttgg | gtaacgccag | ggttttccca | gtcacgacgt | tgtaaaacga | 960 |
| 901 | gacgttccgc | taattcaacc | cattgcggtc | ccaaaagggt | cagtgctgca | acattttgct | 960 |
| .......... | .......... | lacZ_a | ... | M13_pUC_fwd_pri | M13_forward20_pri |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | cggccagtga | attgtaatac | gactcactat | agggcgaatt | gggtacactt | acctggtacc | 1020 |
| 961 | gccggtcact | taacattatg | ctgagtgata | tcccgcttaa | cccatgtgaa | tggaccatgg | 1020 |
| lacZ_a | .......... | T7_pro | .......... | .......... | .......... |
| SmaI | | ApaI,SacII),NotI(1049) | XbaI(1056) | XhoI(1068) | |
| 1021 | ccacccgggt | ggaaaatcga | tgggcccgcg | gccgctctag | aagtactctc | gagaagcttt | 1080 |
| 1021 | ggtgggccca | ccttttagct | acccgggcgc | cggcgagatc | ttcatgagag | ctcttcgaaa | 1080 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| EcoRI | BamHI SpeI | SalI(1104) | PstI(1114) | SacI(1126) | |
| 1081 | ttgaattctt | tggatccact | agtgtcgacc | tgcaggcgcg | cgagctccag | cttttgttcc | 1140 |
| 1081 | aacttaagaa | acctaggtga | tcacagctgg | acgtccgcgc | gctcgaggtc | gaaaacaagg | 1140 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | ctttagtgag | ggttaatttc | gagcttggcg | taatcaaggt | catagctgtt | tcctgtgtga | 1200 |
| 1141 | gaaatcactc | ccaattaaag | ctcgaaccgc | attagttcca | gtatcgacaa | aggacacact | 1200 |
| T3_pro | .......... | .......... | .......... | ....... | M13_pUC_rev_pri |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | aattgttatc | cgctcacaat | tccacacaat | atacgagccg | gaagtataaa | gtgtaaagcc | 1260 |
| 1201 | ttaacaatag | gcgagtgtta | aggtgtgtta | tatgctcggc | cttcatattt | cacatttcgg | 1260 |
| M13_pUC_rev_pri | .... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | NheI(1300) | .......... | .......... |
| 1261 | tggggtgcct | aatgagtgag | ctaactcaca | gtaattgcgg | ctagccaggt | gcacaccaat | 1320 |
| 1261 | accccacgga | ttactcactc | gattgagtgt | cattaacgcc | gatcggtcca | cgtgtggtta | 1320 |
| .......... | .......... | .......... | .......... | .......... | RSV_pro |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1321 | gtggtgaatg | gtcaaatggc | gtttattgta | tcgagctagg | cacttaaata | caattatctc | 1380 |
| 1321 | caccacttac | cagtttaccg | caaataacat | agctcgatcc | gtgaatttat | gttaatagag | 1380 |
| .......... | ..... | RSV_pro pREP_fwd_pri | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1381 | tgcaatgcgg | tattcagtgg | ttcgtccaat | ccatgtcaga | cccgtctgtt | gccttcctaa | 1440 |
| 1381 | acgttacgcc | ataagtcacc | aagcaggtta | ggtacagtct | gggcagacaa | cggaaggatt | 1440 |
| .......... | .......... | RSV_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1441 | taaggcacga | tcgtaccacc | ttacttccac | caatcggcat | gcacggtgct | ttttctctcc | 1500 |
| 1441 | attccgtgct | agcatggtgg | aatgaaggtg | gttagccgta | cgtgccacga | aaaagagagg | 1500 |
| .......... | .......... | RSV_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | ttgtaaggca | tgttgctaac | tcatcgttac | catgttgcaa | gactacaaga | gtattgcata | 1560 |
| 1501 | aacattccgt | acaacgattg | agtagcaatg | gtacaacgtt | ctgatgttct | cataacgtat | 1560 |
| .......... | .......... | RSV_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1561 | agactacatt | tccccctccc | tatgcaaaag | cgaaactact | atatcctgag | gggactccta | 1620 |
| 1561 | tctgatgtaa | agggggaggg | atacgttttc | gctttgatga | tataggactc | ccctgaggat | 1620 |
| .......... | .......... | RSV_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1621 | accgcgtaca | accgaagccc | cgcttttcgc | ctaaacacac | cctagtcccc | tcagatacgc | 1680 |
| 1621 | tggcgcatgt | tggcttcggg | gcgaaaagcg | gatttgtgtg | ggatcagggg | agtctatgcg | 1680 |
| .......... | .......... | RSV_pro | .......... | .......... | .......... |
| .......... | .......... | NruI(1701) | .......... | .......... | .......... |
| 1681 | gtatatctgg | cccgtacatc | gcgaagcagc | gcaaaacgcc | taaccctaag | cagattcttc | 1740 |
| 1681 | catatagacc | gggcatgtag | cgcttcgtcg | cgttttgcgg | attgggattc | gtctaagaag | 1740 |
| .......... | .......... | RSV_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | atgcaattgt | cggtcaagcc | ttgccttgtt | gtagcttaaa | ttttgctcgc | gcactactca | 1800 |
| 1741 | tacgttaaca | gccagttcgg | aacggaacaa | catcgaattt | aaaacgagcg | cgtgatgagt | 1800 |
| .......... | .......... | RSV_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | gcgacctcca | acacacaagc | agggagcaga | tgcatggcgg | taatacggtt | atccacagaa | 1860 |
| 1801 | cgctggaggt | tgtgtgttcg | tccctcgtct | acgtaccgcc | attatgccaa | taggtgtctt | 1860 |
| .......... | RSV_pro | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1861 | tcaggggata | acgcaggaaa | gaacatgtga | gcaaaaggcc | agcaaaaggc | caggaaccgt | 1920 |
| 1861 | agtcccctat | tgcgtccttt | cttgtacact | cgttttccgg | tcgttttccg | gtccttggca | 1920 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | aaaaaggccg | cgttgctggc | gtttttccat | aggctccgcc | cccctgacga | gcatcacaaa | 1980 |
| 1921 | tttttccggc | gcaacgaccg | caaaaaggta | tccgaggcgg | ggggactgct | cgtagtgttt | 1980 |
| .......... | .......... | ........ | pBR322_origin | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | aatcgacgct | caagtcagag | gtggcgaaac | ccgacaggac | tataaagata | ccaggcgttt | 2040 |
| 1981 | ttagctgcga | gttcagtctc | caccgctttg | ggctgtcctg | atatttctat | ggtccgcaaa | 2040 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | ccccctggaa | gctccctcgt | gcgctctcct | gttccgaccc | tgccgcttac | cggatacctg | 2100 |
| 2041 | gggggacctt | cgagggagca | cgcgagagga | caaggctggg | acggcgaatg | gcctatggac | 2100 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | tccgcctttc | tcccttcggg | aagcgtggcg | ctttctcata | gctcacgctg | taggtatctc | 2160 |
| 2101 | aggcggaaag | agggaagccc | ttcgcaccgc | gaaagagtat | cgagtgcgac | atccatagag | 2160 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | agttcggtgt | aggtcgttcg | ctccaagctg | ggctgtgtgc | acgaaccccc | cgttcagccc | 2220 |
| 2161 | tcaagccaca | tccagcaagc | gaggttcgac | ccgacacacg | tgcttggggg | gcaagtcggg | 2220 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | gaccgctgcg | ccttatccgg | taactatcgt | cttgagtcca | acccggtaag | acacgactta | 2280 |
| 2221 | ctggcgacgc | ggaataggcc | attgatagca | gaactcaggt | tgggccattc | tgtgctgaat | 2280 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | tcgccactgg | cagcagccac | tggtaacagg | attagcagag | cgaggtatgt | aggcggtgct | 2340 |
| 2281 | agcggtgacc | gtcgtcggtg | accattgtcc | taatcgtctc | gctccataca | tccgccacga | 2340 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | acagagttct | tgaagtggtg | gcctaactac | ggctacacta | gaaggacagt | atttggtatc | 2400 |
| 2341 | tgtctcaaga | acttcaccac | cggattgatg | ccgatgtgat | cttcctgtca | taaaccatag | 2400 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | tgcgctctgc | tgaagccagt | taccttcgga | aaaagagttg | gtagctcttg | atccggcaaa | 2460 |
| 2401 | acgcgagacg | acttcggtca | atggaagcct | ttttctcaac | catcgagaac | taggccgttt | 2460 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | caaaccaccg | ctggtagcgg | tggttttttt | gtttgcaagc | agcagattac | gcgcagaaaa | 2520 |
| 2461 | gtttggtggc | gaccatcgcc | accaaaaaaa | caaacgttcg | tcgtctaatg | cgcgtctttt | 2520 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2521 | aaaggatctc | aagaagatcc | tttgatcttt | tctacggggt | ctgacgctca | gtggaacgaa | 2580 |
| 2521 | tttcctagag | ttcttctagg | aaactagaaa | agatgcccca | gactgcgagt | caccttgctt | 2580 |
| ........ | pBR322_origin | ........ | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | aactcacgtt | aagggatttt | ggtcatgaga | ttatcaaaaa | ggatcttcac | ctagatcctt | 2640 |
| 2581 | ttgagtgcaa | ttccctaaaa | ccagtactct | aatagttttt | cctagaagtg | gatctaggaa | 2640 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | ttaaattaaa | aatgaagttt | taaatcaatc | taaagtatat | atgagtaacc | tgaggctatg | 2700 |
| 2641 | aatttaattt | ttacttcaaa | atttagttag | atttcatata | tactcattgg | actccgatac | 2700 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | gcagggcctg | ccgccccgac | gttggctgcg | agccctgggc | cttcacccga | acttgggggg | 2760 |
| 2701 | cgtcccggac | ggcggggctg | caaccgacgc | tcgggacccg | gaagtgggct | tgaacccccc | 2760 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2761 | tggggtgggg | aaaaggaaga | aacgcgggcg | tattggcccc | aatggggtct | cggtggggta | 2820 |
| 2761 | accccacccc | ttttccttct | ttgcgcccgc | ataaccgggg | ttaccccaga | gccaccccat | 2820 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2821 | tcgacagagt | gccagccctg | ggaccgaacc | ccgcgtttat | gaacaaacga | cccaacaccg | 2880 |
| 2821 | agctgtctca | cggtcgggac | cctggcttgg | ggcgcaaata | cttgtttgct | gggttgtggc | 2880 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2881 | tgcgttttat | tctgtctttt | tattgccgtc | atagcgcggg | ttccttccgg | tattgtctcc | 2940 |
| 2881 | acgcaaaata | agacagaaaa | ataacggcag | tatcgcgccc | aaggaaggcc | ataacagagg | 2940 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2941 | ttccgtgttt | cagttagcct | ccccctaggg | tgggcgaaga | actccagcat | gagatccccg | 3000 |
| 2941 | aaggcacaaa | gtcaatcgga | gggggatccc | acccgcttct | tgaggtcgta | ctctaggggc | 3000 |
| .......... | TK_PA_term | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | cgctggagga | tcatccagcc | ggcgtcccgg | aaaacgattc | cgaagcccaa | cctttcatag | 3060 |
| 3001 | gcgacctcct | agtaggtcgg | ccgcagggcc | ttttgctaag | gcttcgggtt | ggaaagtatc | 3060 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | aaggcggcgg | tggaatcgaa | atctcgtgat | ggcaggttgg | gcgtcgcttg | gtcggtcatt | 3120 |
| 3061 | ttccgccgcc | accttagctt | tagagcacta | ccgtccaacc | cgcagcgaac | cagccagtaa | 3120 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| BstBI(3121) | ........ | .......... | .......... | .......... | .......... |
| 3121 | tcgaacccca | gagtcccgct | cagaagaact | cgtcaagaag | gcgatagaag | gcgatgcgct | 3180 |
| 3121 | agcttggggt | ctcagggcga | gtcttcttga | gcagttcttc | cgctatcttc | c
gctacgcga | 3180 |
| .......... | .......... | ...... | ORF 2 | Neomycin(variant) | ...... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | gcgaatcggg | agcggcgata | ccgtaaagca | cgaggaagcg | gtcagcccat | tcgccgccaa | 3240 |
| 3181 | cgcttagccc | tcgccgctat | ggcatttcgt | gctccttcgc | cagtcgggta | agcggcggtt | 3240 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | gctcttcagc | aatatcacgg | gtagccaacg | ctatgtcctg | atagcggtcc | gccacaccca | 3300 |
| 3241 | cgagaagtcg | ttatagtgcc | catcggttgc | gatacaggac | tatcgccagg | cggtgtgggt | 3300 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | gccggccaca | gtcgatgaat | ccagaaaagc | ggccattttc | caccatgata | ttcggcaagc | 3360 |
| 3301 | cggccggtgt | cagctactta | ggtcttttcg | ccggtaaaag | gtggtactat | aagccgttcg | 3360 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | aggcatcgcc | atgggtcacg | acgagatcct | cgccgtcggg | catgctcgcc | ttgagcctgg | 3420 |
| 3361 | tccgtagcgg | tacccagtgc | tgctctagga | gcggcagccc | gtacgagcgg | aactcggacc | 3420 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | cgaacagttc | ggctggcgcg | agcccctgat | gctcttcgtc | cagatcatcc | tgatcgacaa | 3480 |
| 3421 | gcttgtcaag | ccgaccgcgc | tcggggacta | cgagaagcag | gtctagtagg | actagctgtt | 3480 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | gaccggcttc | catccgagta | cgtgctcgct | cgatgcgatg | tttcgcttgg | tggtcgaatg | 3540 |
| 3481 | ctggccgaag | gtaggctcat | gcacgagcga | gctacgctac | aaagcgaacc | accagcttac | 3540 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | ggcaggtagc | cggatcaagc | gtatgcagcc | gccgcattgc | atcagccatg | atggatactt | 3600 |
| 3541 | ccgtccatcg | gcctagttcg | catacgtcgg | cggcgtaacg | tagtcggtac | tacctatgaa | 3600 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | tctcggcagg | agcaaggtga | gatgacagga | gatcctgccc | cggcacttcg | cccaatagca | 3660 |
| 3601 | agagccgtcc | tcgttccact | ctactgtcct | ctaggacggg | gccgtgaagc | gggttatcgt | 3660 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | gccagtccct | tcccgcttca | gtgacaacgt | cgagcacagc | tgcgcaagga | acgcccgtcg | 3720 |
| 3661 | cggtcaggga | agggcgaagt | cactgttgca | gctcgtgtcg | acgcgttcct | tgcgggcagc | 3720 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | tggccagcca | cgatagccgc | gctgcctcgt | cttgcagttc | attcagggca | ccggacaggt | 3780 |
| 3721 | accggtcggt | gctatcggcg | cgacggagca | gaacgtcaag | taagtcccgt | ggcctgtcca | 3780 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | NarI(3803) | .......... | .......... | .......... |
| 3781 | cggtcttgac | aaaaagaacc | gggcgcccct | gcgctgacag | ccggaacacg | gcggcatcag | 3840 |
| 3781 | gccagaactg | tttttcttgg | cccgcgggga | cgcgactgtc | ggccttgtgc | cgccgtagtc | 3840 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | agcagccgat | tgtctgttgt | gcccagtcat | agccgaatag | cctctccacc | caagcggccg | 3900 |
| 3841 | tcgtcggcta | acagacaaca | cgggtcagta | tcggcttatc | ggagaggtgg | gttcgccggc | 3900 |
| .......... | ... | ORF 2 Neomycin(variant) | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | gagaacctgc | gtgcaatcca | tcttgttcaa | tcatgcgaaa | cgatcctcat | cctgtctctt | 3960 |
| 3901 | ctcttggacg | cacgttaggt | agaacaagtt | agtacgcttt | gctaggagta | ggacagagaa | 3960 |
| ... | ORF 2 Neomycin(variant) | ... | .......... | .......... | .......... |
| .......... | .......... | StuI(3984) | .......... | .......... | .......... |
| 3961 | gatcgatctt | tgcaaaagcc | taggcctcca | aaaaagcctc | ctcactactt | ctggaatagc | 4020 |
| 3961 | ctagctagaa | acgttttcgg | atccggaggt | tttttcggag | gagtgatgaa | gaccttatcg | 4020 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4021 | tcagaggccg | aggcggcctc | ggcctctgca | taaataaaaa | aaattagtca | gccatggggc | 4080 |
| 4021 | agtctccggc | tccgccggag | ccggagacgt | atttattttt | tttaatcagt | cggtaccccg | 4080 |
| .......... | ... | SV40_pro SV40pro_F_pri | SV40_origin | ... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | ggagaatggg | cggaactggg | cggagttagg | ggcgggatgg | gcggagttag | gggcgggact | 4140 |
| 4081 | cctcttaccc | gccttgaccc | gcctcaatcc | ccgccctacc | cgcctcaatc | cccgccctga | 4140 |
| ......... | SV40_origin | SV40_pro | SV40_enh | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | atggttgctg | actaattgag | atgcatgctt | tgcatacttc | tgcctgctgg | ggagcctggg | 4200 |
| 4141 | taccaacgac | tgattaactc | tacgtacgaa | acgtatgaag | acggacgacc | cctcggaccc | 4200 |
| .......... | ...... | SV40_pro SV40_enh | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | gactttccac | acctggttgc | tgactaattg | agatgcatgc | tttgcatact | tctgcctgct | 4260 |
| 4201 | ctgaaaggtg | tggaccaacg | actgattaac | tctacgtacg | aaacgtatga | agacggacga | 4260 |
| .......... | ...... | SV40_pro SV40_enh | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | ggggagcctg | gggactttcc | acaccctaac | tgacacacat | tccacagctg | gttctttccg | 4320 |
| 4261 | cccctcggac | ccctgaaagg | tgtgggattg | actgtgtgta | aggtgtcgac | caagaaaggc | 4320 |
| ......... | SV40_pro | SV40_enh | pBABE_3_pri | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | cctcaggact | cttccttttt | caatattatt | gaagcattta | tcagggttat | tgtctcatga | 4380 |
| 4321 | ggagtcctga | gaaggaaaaa | gttataataa | cttcgtaaat | agtcccaata | acagagtact | 4380 |
| .......... | .......... | .......... | .......... | .......... | AmpR_pro |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | gcggatacat | atttgaatgt | atttagaaaa | ataaacaaat | aggggttccg | cgcacatttc | 4440 |
| 4381 | cgcctatgta | taaacttaca | taaatctttt | tatttgttta | tccccaaggc | gcgtgtaaag | 4440 |
| AmpR_pro | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | cccgaaaagt | gc........ | .......... | .......... | .......... | .......... | 4452 |
| 4441 | gggcttttca | cg........ | .......... | .......... | .......... | .......... | 4452 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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