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Sequence of pBudCE4.1
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View the plasmid map on line
Sequence of pBudCE4.1
: 4595 BP; 992 A; 1220 C; 1313 G; 1070 T; 0 other; |
| .......... | .......... | SpeI(24) | .......... | .......... | .......... |
| 1 | gcgcgcgttg | acattgatta | ttgactagtt | attaatagta | atcaattacg | gggtcattag | 60 |
| 1 | cgcgcgcaac | tgtaactaat | aactgatcaa | taattatcat | tagttaatgc | cccagtaatc | 60 |
| .......... | .......... | ....... | CMV_immearly_pro | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | ttcatagccc | atatatggag | ttccgcgtta | cataacttac | ggtaaatggc | ccgcctggct | 120 |
| 61 | aagtatcggg | tatatacctc | aaggcgcaat | gtattgaatg | ccatttaccg | ggcggaccga | 120 |
| .......... | ....... | CMV_immearly_pro | ....... | CAG_enh | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | gaccgcccaa | cgacccccgc | ccattgacgt | caataatgac | gtatgttccc |
atagtaacgc | 180 |
| 121 | ctggcgggtt | gctgggggcg | ggtaactgca | gttattactg | catacaaggg | tatcattgcg | 180 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 181 | caatagggac | tttccattga | cgtcaatggg | tggactattt | acggtaaact |
gcccacttgg | 240 |
| 181 | gttatccctg | aaaggtaact | gcagttaccc | acctgataaa | tgccatttga | cgggtgaacc | 240 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | NdeI(259) | .......... | .......... | .......... | .......... |
| 241 | cagtacatca | agtgtatcat | atgccaagta | cgccccctat | tgacgtcaat |
gacggtaaat | 300 |
| 241 | gtcatgtagt | tcacatagta | tacggttcat | gcgggggata | actgcagtta | ctgccattta | 300 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | ggcccgcctg | gcattatgcc | cagtacatga | ccttatggga | ctttcctact |
tggcagtaca | 360 |
| 301 | ccgggcggac | cgtaatacgg | gtcatgtact | ggaataccct | gaaaggatga | accgtcatgt | 360 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | tctacgtatt | agtcatcgct | attaccatgg | tgatgcggtt | ttggcagtac | atcaatgggc | 420 |
| 361 | agatgcataa | tcagtagcga | taatggtacc | actacgccaa | aaccgtcatg | tagttacccg | 420 |
| CAG_enh | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | gtggatagcg | gtttgactca | cggggatttc | caagtctcca | ccccattgac | gtcaatggga | 480 |
| 421 | cacctatcgc | caaactgagt | gcccctaaag | gttcagaggt | ggggtaactg | cagttaccct | 480 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | gtttgttttg | gcaccaaaat | caacgggact | ttccaaaatg | tcgtaacaac | tccgccccat | 540 |
| 481 | caaacaaaac | cgtggtttta | gttgccctga | aaggttttac | agcattgttg | aggcggggta | 540 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 541 | tgacgcaaat | gggcggtagg | cgtgtacggt | gggaggtcta | tataagcaga | gctctctggc | 600 |
| 541 | actgcgttta | cccgccatcc | gcacatgcca | ccctccagat | atattcgtct | cgagagaccg | 600 |
| ...... | CMV_fwd_pri | CMV_immearly_pro | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 601 | taactagaga | acccactgct | tactggctta | tcgaaattaa | tacgactcac | tatagggaga | 660 |
| 601 | attgatctct | tgggtgacga | atgaccgaat | agctttaatt | atgctgagtg | atatccctct | 660 |
| ....... | CMV_immearly_pro | ....... | .......... | T7_pro | .......... |
| HindIII | | PstI,SalI | ClaI,AflII | XbaI(707) | BamHI(713) |
| 661 | cccaagcttg | cattcctgca | ggtcgacatc | gatcttaagc | agtacttcta | gaggatccga | 720 |
| 661 | gggttcgaac | gtaaggacgt | ccagctgtag | ctagaattcg | tcatgaagat | ctcctaggct | 720 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | acaaaaactc | atctcagaag | aggatctgaa | tatgcatacc | ggtcatcatc | accatcacca | 780 |
| 721 | tgtttttgag | tagagtcttc | tcctagactt | atacgtatgg | ccagtagtag | tggtagtggt | 780 |
| .......... | c_myc | .......... | .......... | .......... | 6xHis |
| .......... | EcoRI(798) | .......... | .......... | .......... | .......... |
| 781 | ttgagtttga | tccccgggaa | ttcagacatg | ataagataca | ttgatgagtt | tggacaaacc | 840 |
| 781 | aactcaaact | aggggccctt | aagtctgtac | tattctatgt | aactactcaa | acctgtttgg | 840 |
| .......... | .......... | .......... | ........ | SV40_PA_term | EBV_rev_pri |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | acaactagaa | tgcagtgaaa | aaaatgcttt | atttgtgaaa | tttgtgatgc | tattgcttta | 900 |
| 841 | tgttgatctt | acgtcacttt | ttttacgaaa | taaacacttt | aaacactacg | ataacgaaat | 900 |
| .......... | ......... | SV40_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | tttgtaacca | ttataagctg | caataaacaa | gttggggtgg | gcgaagaact | ccagcatgag | 960 |
| 901 | aaacattggt | aatattcgac | gttatttgtt | caaccccacc | cgcttcttga | ggtcgtactc | 960 |
| ......... | SV40_PA_term | ......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | atccccgcgc | tggaggatca | tccagccggc | gtcccggaaa | acgattccga | agcccaacct | 1020 |
| 961 | taggggcgcg | acctcctagt | aggtcggccg | cagggccttt | tgctaaggct | tcgggttgga | 1020 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1021 | ttcatagaag | gcggcggtgg | aatcgaaatc | tcgtagcacg | tgtcagtcct | gctcctcggc | 1080 |
| 1021 | aagtatcttc | cgccgccacc | ttagctttag | agcatcgtgc | acagtcagga | cgaggagccg | 1080 |
| .......... | .......... | .......... | .......... | ......... | sh_ble bleo |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1081 | cacgaagtgc | acgcagttgc | cggccgggtc | gcgcagggcg | aactcccgcc | cccacggctg | 1140 |
| 1081 | gtgcttcacg | tgcgtcaacg | gccggcccag | cgcgtcccgc | ttgagggcgg | gggtgccgac | 1140 |
| .......... | ......... | sh_ble bleo | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | ctcgccgatc | tcggtcatgg | ccggcccgga | ggcgtcccgg | aagttcgtgg | acacgacctc | 1200 |
| 1141 | gagcggctag | agccagtacc | ggccgggcct | ccgcagggcc | ttcaagcacc | tgtgctggag | 1200 |
| .......... | ......... | sh_ble bleo | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | cgaccactcg | gcgtacagct | cgtccaggcc | gcgcacccac | acccaggcca | gggtgttgtc | 1260 |
| 1201 | gctggtgagc | cgcatgtcga | gcaggtccgg | cgcgtgggtg | tgggtccggt | cccacaacag | 1260 |
| .......... | ......... | sh_ble bleo | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1261 | cggcaccacc | tggtcctgga | ccgcgctgat | gaacagggtc | acgtcgtccc | ggaccacacc | 1320 |
| 1261 | gccgtggtgg | accaggacct | ggcgcgacta | cttgtcccag | tgcagcaggg | cctggtgtgg | 1320 |
| .......... | ......... | sh_ble bleo | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1321 | ggcgaagtcg | tcctccacga | agtcccggga | gaacccgagc | cggtcggtcc | agaactcgac | 1380 |
| 1321 | ccgcttcagc | aggaggtgct | tcagggccct | cttgggctcg | gccagccagg | tcttgagctg | 1380 |
| .......... | ......... | sh_ble bleo | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | MscI(1433) |
| 1381 | cgctccggcg | acgtcgcgcg | cggtgagcac | cggaacggca | ctggtcaact | tggccatggt | 1440 |
| 1381 | gcgaggccgc | tgcagcgcgc | gccactcgtg | gccttgccgt | gaccagttga | accggtacca | 1440 |
| .......... | ......... | sh_ble bleo | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1441 | ttagttcctc | accttgtcgt | attatactat | gccgatatac | tatgccgatg | attaattgtc | 1500 |
| 1441 | aatcaaggag | tggaacagca | taatatgata | cggctatatg | atacggctac | taattaacag | 1500 |
| .......... | .......... | EM7_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | aacacgtgct | gatcagatcc | gaaaatggat | atacaagctc | ccgggagctt | tttgcaaaag | 1560 |
| 1501 | ttgtgcacga | ctagtctagg | cttttaccta | tatgttcgag | ggccctcgaa | aaacgttttc | 1560 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1561 | cctaggcctc | caaaaaagcc | tcctcactac | ttctggaata | gctcagaggc | agaggcggcc | 1620 |
| 1561 | ggatccggag | gttttttcgg | aggagtgatg | aagaccttat | cgagtctccg | tctccgccgg | 1620 |
| .......... | .......... | .......... | .......... | SV40_pro | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1621 | tcggcctctg | cataaataaa | aaaaattagt | cagccatggg | gcggagaatg | ggcggaactg | 1680 |
| 1621 | agccggagac | gtatttattt | tttttaatca | gtcggtaccc | cgcctcttac | ccgccttgac | 1680 |
| SV40pro_F_pri | ..... | SV40_pro | SV40_origin | ......... | SV40_enh |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1681 | ggcggagtta | ggggcgggat | gggcggagtt | aggggcggga | ctatggttgc | tgactaattg | 1740 |
| 1681 | ccgcctcaat | ccccgcccta | cccgcctcaa | tccccgccct | gataccaacg | actgattaac | 1740 |
| SV40_origin | .... | SV40_pro SV40_enh | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | agatgcatgc | tttgcatact | tctgcctgct | ggggagcctg | gggactttcc | acacctggtt | 1800 |
| 1741 | tctacgtacg | aaacgtatga | agacggacga | cccctcggac | ccctgaaagg | tgtggaccaa | 1800 |
| .......... | ...... | SV40_pro SV40_enh | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | gctgactaat | tgagatgcat | gctttgcata | cttctgcctg | ctggggagcc | tggggacttt | 1860 |
| 1801 | cgactgatta | actctacgta | cgaaacgtat | gaagacggac | gacccctcgg | acccctgaaa | 1860 |
| .......... | ...... | SV40_pro SV40_enh | ...... | .......... | .......... |
| .......... | NheI(1876) | .......... | .......... | .......... | .......... |
| 1861 | ccacaccctc | gtcgagctag | cttcgtgagg | ctccggtgcc | cgtcagtggg | cagagcgcac | 1920 |
| 1861 | ggtgtgggag | cagctcgatc | gaagcactcc | gaggccacgg | gcagtcaccc | gtctcgcgtg | 1920 |
| .......... | .......... | .......... | ORF 2 | EF1a_pro | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | atcgcccaca | gtccccgaga | agttgggggg | aggggtcggc | aattgaaccg | gtgcctagag | 1980 |
| 1921 | tagcgggtgt | caggggctct | tcaacccccc | tccccagccg | ttaacttggc | cacggatctc | 1980 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | aaggtggcgc | ggggtaaact | gggaaagtga | tgtcgtgtac | tggctccgcc | tttttcccga | 2040 |
| 1981 | ttccaccgcg | ccccatttga | ccctttcact | acagcacatg | accgaggcgg | aaaaagggct | 2040 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | gggtggggga | gaaccgtata | taagtgcagt | agtcgccgtg | aacgttcttt | ttcgcaacgg | 2100 |
| 2041 | cccaccccct | cttggcatat | attcacgtca | tcagcggcac | ttgcaagaaa | aagcgttgcc | 2100 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | gtttgccgcc | agaacacagg | taagtgccgt | gtgtggttcc | cgcgggcctg | gcctctttac | 2160 |
| 2101 | caaacggcgg | tcttgtgtcc | attcacggca | cacaccaagg | gcgcccggac | cggagaaatg | 2160 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | gggttatggc | ccttgcgtgc | cttgaattac | ttccacctgg | ctccagtacg | tgattcttga | 2220 |
| 2161 | cccaataccg | ggaacgcacg | gaacttaatg | aaggtggacc | gaggtcatgc | actaagaact | 2220 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | tcccgagctg | gagccagggg | cgggccttgc | gctttaggag | ccccttcgcc | tcgtgcttga | 2280 |
| 2221 | agggctcgac | ctcggtcccc | gcccggaacg | cgaaatcctc | ggggaagcgg | agcacgaact | 2280 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | gttgaggcct | ggcctgggcg | ctggggccgc | cgcgtgcgaa | tctggtggca | ccttcgcgcc | 2340 |
| 2281 | caactccgga | ccggacccgc | gaccccggcg | gcgcacgctt | agaccaccgt | ggaagcgcgg | 2340 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | tgtctcgctg | ctttcgataa | gtctctagcc | atttaaaatt | tttgatgacc | tgctgcgacg | 2400 |
| 2341 | acagagcgac | gaaagctatt | cagagatcgg | taaattttaa | aaactactgg | acgacgctgc | 2400 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | ctttttttct | ggcaagatag | tcttgtaaat | gcgggccagg | atctgcacac | tggtatttcg | 2460 |
| 2401 | gaaaaaaaga | ccgttctatc | agaacattta | cgcccggtcc | tagacgtgtg | accataaagc | 2460 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | gtttttgggc | ccgcggccgg | cgacggggcc | cgtgcgtccc | agcgcacatg | ttcggcgagg | 2520 |
| 2461 | caaaaacccg | ggcgccggcc | gctgccccgg | gcacgcaggg | tcgcgtgtac | aagccgctcc | 2520 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2521 | cggggcctgc | gagcgcggcc | accgagaatc | ggacgggggt | agtctcaagc | tggccggcct | 2580 |
| 2521 | gccccggacg | ctcgcgccgg | tggctcttag | cctgccccca | tcagagttcg | accggccgga | 2580 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | gctctggtgc | ctggcctcgc | gccgccgtgt | atcgccccgc | cctgggcggc | aaggctggcc | 2640 |
| 2581 | cgagaccacg | gaccggagcg | cggcggcaca | tagcggggcg | ggacccgccg | ttccgaccgg | 2640 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | cggtcggcac | cagttgcgtg | agcggaaaga | tggccgcttc | ccggccctgc | tccagggggc | 2700 |
| 2641 | gccagccgtg | gtcaacgcac | tcgcctttct | accggcgaag | ggccgggacg | aggtcccccg | 2700 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | tcaaaatgga | ggacgcggcg | ctcgggagag | cgggcgggtg | agtcacccac | acaaaggaaa | 2760 |
| 2701 | agttttacct | cctgcgccgc | gagccctctc | gcccgcccac | tcagtgggtg | tgtttccttt | 2760 |
| .......... | ........ | ORF 2 EF1a_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2761 | agggcctttc | cgtcctcagc | cgtcgcttca | tgtgactcca | cggagtaccg | ggcgccgtcc | 2820 |
| 2761 | tcccggaaag | gcaggagtcg | gcagcgaagt | acactgaggt | gcctcatggc | ccgcggcagg | 2820 |
| .......... | ORF 2 | EF1a_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2821 | aggcacctcg | attagttctg | gagcttttgg | agtacgtcgt | ctttaggttg | gggggagggg | 2880 |
| 2821 | tccgtggagc | taatcaagac | ctcgaaaacc | tcatgcagca | gaaatccaac | ccccctcccc | 2880 |
| .......... | .......... | EF1a_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2881 | ttttatgcga | tggagtttcc | ccacactgag | tgggtggaga | ctgaagttag | gccagcttgg | 2940 |
| 2881 | aaaatacgct | acctcaaagg | ggtgtgactc | acccacctct | gacttcaatc | cggtcgaacc | 2940 |
| .......... | .......... | EF1a_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2941 | cacttgatgt | aattctcgtt | ggaatttgcc | ctttttgagt | ttggatcttg | gttcattctc | 3000 |
| 2941 | gtgaactaca | ttaagagcaa | ccttaaacgg | gaaaaactca | aacctagaac | caagtaagag | 3000 |
| .......... | .......... | EF1a_pro | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | aagcctcaga | cagtggttca | aagttttttt | cttccatttc | aggtgtcgtg | aacacgtggt | 3060 |
| 3001 | ttcggagtct | gtcaccaagt | ttcaaaaaaa | gaaggtaaag | tccacagcac | ttgtgcacca | 3060 |
| EF1a_fwd_pri | ........ | EF1a_pro | .......... | .......... | .......... |
| NotI(3063) | KpnI(3080) | .... | XhoI(3093) BglII(3099) | .... | .......... |
| 3061 | cgcggccgct | tcgaaggtac | cagcacagtg | gactcgagag | atctggccgg | ctgggcccgt | 3120 |
| 3061 | gcgccggcga | agcttccatg | gtcgtgtcac | ctgagctctc | tagaccggcc | gacccgggca | 3120 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | ttcgaaggta | agcctatccc | taaccctctc | ctcggtctcg | attctacgcg | taccggtcat | 3180 |
| 3121 | aagcttccat | tcggataggg | attgggagag | gagccagagc | taagatgcgc | atggccagta | 3180 |
| .......... | .......... | V5 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | catcaccatc | accattgagt | ttaaacccgc | tgatcagcct | cgactgtgcc | ttctagttgc | 3240 |
| 3181 | gtagtggtag | tggtaactca | aatttgggcg | actagtcgga | gctgacacgg | aagatcaacg | 3240 |
| 6xHis | .......... | .......... | ... | BGH_rev_pri bGH_PA_term | ... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | cagccatctg | ttgtttgccc | ctcccccgtg | ccttccttga | ccctggaagg | tgccactccc | 3300 |
| 3241 | gtcggtagac | aacaaacggg | gagggggcac | ggaaggaact | gggaccttcc | acggtgaggg | 3300 |
| .......... | ......... | bGH_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | actgtccttt | cctaataaaa | tgaggaaatt | gcatcgcatt | gtctgagtag | gtgtcattct | 3360 |
| 3301 | tgacaggaaa | ggattatttt | actcctttaa | cgtagcgtaa | cagactcatc | cacagtaaga | 3360 |
| .......... | ......... | bGH_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | attctggggg | gtggggtggg | gcaggacagc | aagggggagg | attgggaaga | caatagcagg | 3420 |
| 3361 | taagaccccc | caccccaccc | cgtcctgtcg | ttccccctcc | taacccttct | gttatcgtcc | 3420 |
| .......... | ......... | bGH_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | catgctgggg | atgcggtggg | ctctatggct | tctgaggcgg | aaagaaccag | tggcggtaat | 3480 |
| 3421 | gtacgacccc | tacgccaccc | gagataccga | agactccgcc | tttcttggtc | accgccatta | 3480 |
| ......... | bGH_PA_term | ......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | acggttatcc | acagaatcag | gggataacgc | aggaaagaac | atgtgagcaa | aaggccagca | 3540 |
| 3481 | tgccaatagg | tgtcttagtc | ccctattgcg | tcctttcttg | tacactcgtt | ttccggtcgt | 3540 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | aaaggccagg | aaccgtaaaa | aggccgcgtt | gctggcgttt | ttccataggc | tccgcccccc | 3600 |
| 3541 | tttccggtcc | ttggcatttt | tccggcgcaa | cgaccgcaaa | aaggtatccg | aggcgggggg | 3600 |
| .......... | .......... | .......... | ........ | pBR322_origin | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | tgacgagcat | cacaaaaatc | gacgctcaag | tcagaggtgg | cgaaacccga | caggactata | 3660 |
| 3601 | actgctcgta | gtgtttttag | ctgcgagttc | agtctccacc | gctttgggct | gtcctgatat | 3660 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | aagataccag | gcgtttcccc | ctggaagctc | cctcgtgcgc | tctcctgttc | cgaccctgcc | 3720 |
| 3661 | ttctatggtc | cgcaaagggg | gaccttcgag | ggagcacgcg | agaggacaag | gctgggacgg | 3720 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | gcttaccgga | tacctgtccg | cctttctccc | ttcgggaagc | gtggcgcttt | ctcatagctc | 3780 |
| 3721 | cgaatggcct | atggacaggc | ggaaagaggg | aagcccttcg | caccgcgaaa | gagtatcgag | 3780 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | acgctgtagg | tatctcagtt | cggtgtaggt | cgttcgctcc | aagctgggct | gtgtgcacga | 3840 |
| 3781 | tgcgacatcc | atagagtcaa | gccacatcca | gcaagcgagg | ttcgacccga | cacacgtgct | 3840 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | accccccgtt | cagcccgacc | gctgcgcctt | atccggtaac | tatcgtcttg | agtccaaccc | 3900 |
| 3841 | tggggggcaa | gtcgggctgg | cgacgcggaa | taggccattg | atagcagaac | tcaggttggg | 3900 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | ggtaagacac | gacttatcgc | cactggcagc | agccactggt | aacaggatta | gcagagcgag | 3960 |
| 3901 | ccattctgtg | ctgaatagcg | gtgaccgtcg | tcggtgacca | ttgtcctaat | cgtctcgctc | 3960 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | gtatgtaggc | ggtgctacag | agttcttgaa | gtggtggcct | aactacggct | acactagaag | 4020 |
| 3961 | catacatccg | ccacgatgtc | tcaagaactt | caccaccgga | ttgatgccga | tgtgatcttc | 4020 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4021 | gacagtattt | ggtatctgcg | ctctgctgaa | gccagttacc | ttcggaaaaa | gagttggtag | 4080 |
| 4021 | ctgtcataaa | ccatagacgc | gagacgactt | cggtcaatgg | aagccttttt | ctcaaccatc | 4080 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | ctcttgatcc | ggcaaacaaa | ccaccgctgg | tagcggtggt | ttttttgttt | gcaagcagca | 4140 |
| 4081 | gagaactagg | ccgtttgttt | ggtggcgacc | atcgccacca | aaaaaacaaa | cgttcgtcgt | 4140 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | gattacgcgc | agaaaaaaag | gatctcaaga | agatcctttg | atcttttcta | cggggtctga | 4200 |
| 4141 | ctaatgcgcg | tctttttttc | ctagagttct | tctaggaaac | tagaaaagat | gccccagact | 4200 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | cgctcagtgg | aacgaaaact | cacgttaagg | gattttggtc | atgacattaa | cctataaaaa | 4260 |
| 4201 | gcgagtcacc | ttgcttttga | gtgcaattcc | ctaaaaccag | tactgtaatt | ggatattttt | 4260 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | taggcgtatc | acgaggccct | ttcgtctcgc | gcgtttcggt | gatgacggtg | aaaacctctg | 4320 |
| 4261 | atccgcatag | tgctccggga | aagcagagcg | cgcaaagcca | ctactgccac | ttttggagac | 4320 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | acacatgcag | ctcccggaga | cggtcacagc | ttgtctgtaa | gcggatgccg | ggagcagaca | 4380 |
| 4321 | tgtgtacgtc | gagggcctct | gccagtgtcg | aacagacatt | cgcctacggc | cctcgtctgt | 4380 |
| pGEX_3_pri | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | agcccgtcag | ggcgcgtcag | cgggtgttgg | cgggtgtcgg | ggctggctta | actatgcggc | 4440 |
| 4381 | tcgggcagtc | ccgcgcagtc | gcccacaacc | gcccacagcc | ccgaccgaat | tgatacgccg | 4440 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | atcagagcag | attgtactga | gagtgcacca | tatatgcggt | gtgaaatacc | gcacagatgc | 4500 |
| 4441 | tagtctcgtc | taacatgact | ctcacgtggt | atatacgcca | cactttatgg | cgtgtctacg | 4500 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | FspI(4546) | .......... |
| 4501 | gtaaggagaa | aataccgcat | caggcgccat | tcgccattca | ggctgcgcaa | ctgttgggaa | 4560 |
| 4501 | cattcctctt | ttatggcgta | gtccgcggta | agcggtaagt | ccgacgcgtt | gacaaccctt | 4560 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4561 | gggcgatcgg | tgcgggcctc | ttcgctatta | cgcca..... | .......... | .......... | 4595 |
| 4561 | cccgctagcc | acgcccggag | aagcgataat | gcggt..... | .......... | .......... | 4595 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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