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  • BVTech Plasmid

    This sequnce graph is created using BVTech Plasmid, which is DNA sequence analysis and plasmid drawing software for Windows PCs.You can use it to plan your DNA cloning, draw high quality plasmid maps, analyse your DNA sequencing data, align sequences, and much more.

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    Sequence of pCFJ150

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    Sequence of pCFJ150 - pDESTttTi5605[R4-R3] : 9482 BP; 2736 A; 1794 C; 2009 G; 2661 T; 282 other;

    ............................................................
    1tgtgaaattgttatccgctggtatcagctcactcaaaggcggtaatacggttatccacag60
    1acactttaacaataggcgaccatagtcgagtgagtttccgccattatgccaataggtgtc60
    ............................................................
    ............................................................
    61aatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaagaccaggaacc120
    61ttagtcccctattgcgtcctttcttgtacactcgttttccggtcgttttctggtccttgg120
    ............................................................
    ............................................................
    121gtaaaaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcaca180
    121catttttccggcgcaacgaccgcaaaaaggtatccgaggcggggggactgctcgtagtgt180
    ............................ pBR322_origin..................
    ............................................................
    181aaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgt240
    181ttttagctgcgagttcagtctccaccgctttgggctgtcctgatatttctatggtccgca240
    .................. pBR322_origin............................
    ............................................................
    241ttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacc300
    241aagggggaccttcgagggagcacgcgagaggacaaggctgggacggcgaatggcctatgg300
    .................. pBR322_origin............................
    ............................................................
    301tgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatc360
    301acaggcggaaagagggaagcccttcgcaccgcgaaagagtatcgagtgcgacatccatag360
    .................. pBR322_origin............................
    ............................................................
    361tcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagc420
    361agtcaagccacatccagcaagcgaggttcgacccgacacacgtgcttggggggcaagtcg420
    .................. pBR322_origin............................
    ............................................................
    421ccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgact480
    421ggctggcgacgcggaataggccattgatagcagaactcaggttgggccattctgtgctga480
    .................. pBR322_origin............................
    ............................................................
    481tatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtg540
    481atagcggtgaccgtcgtcggtgaccattgtcctaatcgtctcgctccatacatccgccac540
    .................. pBR322_origin............................
    ............................................................
    541ctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggta600
    541gatgtctcaagaacttcaccaccggattgatgccgatgtgatcttcctgtcataaaccat600
    .................. pBR322_origin............................
    ............................................................
    601tctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggca660
    601agacgcgagacgacttcggtcaatggaagcctttttctcaaccatcgagaactaggccgt660
    .................. pBR322_origin............................
    ............................................................
    661aacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaa720
    661ttgtttggtggcgaccatcgccaccaaaaaaacaaacgttcgtcgtctaatgcgcgtctt720
    .................. pBR322_origin............................
    ............................................................
    721aaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacg780
    721tttttcctagagttcttctaggaaactagaaaagatgccccagactgcgagtcaccttgc780
    ........ pBR322_origin......................................
    ............................................................
    781aaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatcc840
    781ttttgagtgcaattccctaaaaccagtactctaatagtttttcctagaagtggatctagg840
    ............................................................
    ............................................................
    841ttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctg900
    841aaaatttaatttttacttcaaaatttagttagatttcatatatactcatttgaaccagac900
    ............................................................
    ............................................................
    901acagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcat960
    901tgtcaatggttacgaattagtcactccgtggatagagtcgctagacagat aaagcaagta960
    ........................... ORF 2 Ampicillin.................
    ............................................................
    961ccatagttgcctgactccccgtcgtgtagataactacgatacgggagggcttaccatctg1020
    961ggtatcaacggactgaggggcagcacatctattgatgctatgccctcccg aatggtagac1020
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1021gccccagtgctgcaatgataccgcgagacccacgctcaccggctccagatttatcagcaa1080
    1021cggggtcacgacgttactatggcgctctgggtgcgagtggccgaggtctaaatagtcgtt1080
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1081taaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctcca1140
    1081atttggtcggtcggccttcccggctcgcgtcttcaccaggacgttgaaataggcggaggt1140
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1141tccagtctattaattgttgccgggaagctagagtaagtagttcgccagttaatagtttgc1200
    1141aggtcagataattaacaacggcccttcgatctcattcatcaagcggtcaattatcaaacg1200
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1201gcaacgttgttgccattgctacaggcatcgtggtgtcacgctcgtcgtttggtatggctt1260
    1201cgttgcaacaacggtaacgatgtccgtagcaccacagtgcgagcagcaaaccataccgaa1260
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1261cattcagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaa1320
    1261gtaagtcgaggccaagggttgctagttccgctcaatgtactagggggtacaacacgtttt1320
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1321aagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgcagtgttat1380
    1321ttcgccaatcgaggaagccaggaggctagcaacagtcttcattcaaccggcgtcacaata1380
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1381cactcatggttatggcagcactgcataattctcttactgtcatgccatccgtaagatgct1440
    1381gtgagtaccaataccgtcgtgacgtattaagagaatgacagtacggtaggcattctacga1440
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1441tttctgtgactggtgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccga1500
    1441aaagacactgaccactcatgagttggttcagtaagactcttatcacatacgccgctggct1500
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1501gttgctcttgcccggcgtcaatacgggataataccgcgccacatagcagaactttaaaag1560
    1501caacgagaacgggccgcagttatgccctattatggcgcggtgtatcgtcttgaaattttc1560
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1561tgctcatcattggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttga1620
    1561acgagtagtaaccttttgcaagaagccccgcttttgagagttcctagaatggcgacaact1620
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1621gatccagttcgatgtaacccactcgtgcacccaactgatcttcagcatcttttactttca1680
    1621ctaggtcaagctacattgggtgagcacgtgggttgactagaagtcgtagaaaatgaaagt1680
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1681ccagcgtttctgggtgagcaaaaacaggaaggcaaaatgccgcaaaaaagggaataaggg1740
    1681ggtcgcaaagacccactcgtttttgtccttccgttttacggcgttttttcccttattccc1740
    ................. ORF 2 Ampicillin...........................
    ............................................................
    1741cgacacggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatc1800
    1741gctgtgcctttacaacttatgagtatgagaaggaaaaagttataataacttcgtaaatag1800
    ....... ORF 2 Ampicillin.....................................
    ............................................................
    1801agggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatag1860
    1801tcccaataacagagtactcgcctatgtataaacttacataaatctttttatttgtttatc1860
    .................... AmpR_pro..............................
    ............................................................
    1861gggttccgcgcacatttccccgaaaagtgccacctgacgtctaagaaaccattattatca1920
    1861cccaaggcgcgtgtaaaggggcttttcacggtggactgcagattctttggtaataatagt1920
    ............................................................
    ............................................................
    1921tgacattaacctataaaaataggcgtatcacgaggccctttcgtctcgcgcgtttcggtg1980
    1921actgtaattggatatttttatccgcatagtgctccgggaaagcagagcgcgcaaagccac1980
    ............................................................
    ............................................................
    1981atgacggtgaaaacctctgacacatgcagctcccggagacggtcacagcttgtctgtaag2040
    1981tactgccacttttggagactgtgtacgtcgagggcctctgccagtgtcgaacagacattc2040
    .................... pGEX_3_pri..............................
    ............................................................
    2041cggatgccgggagcagacaagcccgtcagggcgcgtcagcgggtgttggcgggtgtcggg2100
    2041gcctacggccctcgtctgttcgggcagtcccgcgcagtcgcccacaaccgcccacagccc2100
    ............................................................
    ............................................................
    2101gctggcttaactatgcggcatcagagcagattgtactgagagtgcaccatatgcggtgtg2160
    2101cgaccgaattgatacgccgtagtctcgtctaacatgactctcacgtggtatacgccacac2160
    ............................................................
    ............................................................
    2161aaataccgcacagatgcgtaaggagaaaataccgcatcaggcgccattcgccattcaggc2220
    2161tttatggcgtgtctacgcattcctcttttatggcgtagtccgcggtaagcggtaagtccg2220
    ............................................................
    ............................................................
    2221tgcgcaactgttgggaagggcgatcggtgcgggcctcttcgctattacgccagctggcga2280
    2221acgcgttgacaacccttcccgctagccacgcccggagaagcgataatgcggtcgaccgct2280
    ............................................................
    ............................................................
    2281aagggggatgtgctgcaaggcgattaagttgggtaacgccagggttttcccagtcacgac2340
    2281ttccccctacacgacgttccgctaattcaacccattgcggtcccaaaagggtcagtgctg2340
    ............................................................
    PmlI(2345)..................................................
    2341gtcacgtgtgtttttgaacacggcgatatgtatctgtagatcatccccaattttcaacaa2400
    2341cagtgcacacaaaaacttgtgccgctatacatagacatctagtaggggttaaaagttgtt2400
    ............................................................
    ............................................................
    2401tgaatctaaatactgaactttttgtgtaatctttagtgcagaaaaatgaccaaaatcagc2460
    2401acttagatttatgacttgaaaaacacattagaaatcacgtctttttactggttttagtcg2460
    ............................................................
    ............................................................
    2461gattttccgattatacccaaaatatctcagctcaatgagcacctataaaaatgtaaaaat2520
    2461ctaaaaggctaatatgggttttatagagtcgagttactcgtggatatttttacattttta2520
    ............................................................
    ............................................................
    2521aaagaaagtagtcgaaccatattttgtaaaggctaaaaaactgaataaatttttatccat2580
    2521tttctttcatcagcttggtataaaacatttccgattttttgacttatttaaaaataggta2580
    ............................................................
    ............................................................
    2581ccagcgcggcgttacaatccgtggcccatgtcacgcacggctttcaaagaaaaaaaaaca2640
    2581ggtcgcgccgcaatgttaggcaccgggtacagtgcgtgccgaaagtttctttttttttgt2640
    ............................................................
    ............................................................
    2641gtctgtttgcgcgacatcgatctggcaaaaatcctaaaaacgactatgcgtggctcactt2700
    2641cagacaaacgcgctgtagctagaccgtttttaggatttttgctgatacgcaccgagtgaa2700
    ............................................................
    ............................................................
    2701tatattaatatgaaaaatacaaacttggtggtgcaggtgctgcagaggccatcgatgaag2760
    2701atataattatactttttatgtttgaaccaccacgtccacgacgtctccggtagctacttc2760
    ............................................................
    ............................................................
    2761aagtggaggccttgttgtcgatctacaaaattgtatggttgtttgagattttccttgaaa2820
    2761ttcacctccggaacaacagctagatgttttaacataccaacaaactctaaaaggaacttt2820
    ............................................................
    ............................................................
    2821cgctctcaatcttggatatgatataaattctggataagatatgatggatatgatctatgt2880
    2821gcgagagttagaacctatactatatttaagacctattctatactacctatactagataca2880
    ............................................................
    ............................................................
    2881ttgatagagtgcatttgaaaggataacggccctgcagacatttttgaaaaaataacaaac2940
    2881aactatctcacgtaaactttcctattgccgggacgtctgtaaaaacttttttattgtttg2940
    ............................................................
    ............................................................
    2941atttaattttctcactcgtttaggctattcccctatttttgatattccttcgcacatatg3000
    2941taaattaaaagagtgagcaaatccgataaggggataaaaactataaggaagcgtgtatac3000
    ............................................................
    ............................................................
    3001aaaactactttttttcgaaactgttaactccagaatttataaatctatagcccttacttg3060
    3001ttttgatgaaaaaaagctttgacaattgaggtcttaaatatttagatatcgggaatgaac3060
    ............................................................
    ............................................................
    3061attatttattatcatggttactcacctcatgtctctttctcttttcaagaagtcttcgtt3120
    3061taataaataatagtaccaatgagtggagtacagagaaagagaaaagttcttcagaagcaa3120
    ............................................................
    ............................................................
    3121catatctgttgtctctttcctccttttgaatctctgctttgctcttcgccattgtttcct3180
    3121gtatagacaacagagaaaggaggaaaacttagagacgaaacgagaagcggtaacaaagga3180
    ............................................................
    ............................................................
    3181gaaaataatgtaacttgaattgtgtaatatacttttttaatttgaatttggcttgtaacg3240
    3181cttttattacattgaacttaacacattatatgaaaaaattaaacttaaaccgaacattgc3240
    ............................................................
    ............................................................
    3241cggaatcactacgtgcgggatcatttcttactagaaaacccagaaaatgccatatttcac3300
    3241gccttagtgatgcacgccctagtaaagaatgatcttttgggtcttttacggtataaagtg3300
    ............................................................
    ............................................................
    3301ttatctcggggtcatttctaattagaaaagctacaaaaaccatttctaattacggtgact3360
    3301aatagagccccagtaaagattaatcttttcgatgtttttggtaaagattaatgccactga3360
    ............................................................
    ............................................................
    3361ttagaactggtcgaaatagctaattagaaatgggtttttgctaattagaggtgactctat3420
    3361aatcttgaccagctttatcgattaatctttacccaaaaacgattaatctccactgagata3420
    ............................................................
    ............................................................
    3421gttatctgagtaagcctcgtttgtatgtaaactcacagtactaataaatgcaagacaccc3480
    3421caatagactcattcggagcaaacatacatttgagtgtcatgattatttacgttctgtggg3480
    ............................................................
    ............................................................
    3481gggtttgtctagatatgaaataattgaaatatcaattctgacagacaataatggtaatct3540
    3481cccaaacagatctatactttattaactttatagttaagactgtctgttattaccattaga3540
    ............................................................
    ............................................................
    3541tgataaggagttccacgcccaggagaacacgttagttttcttgtttttgattgcgtgcgt3600
    3541actattcctcaaggtgcgggtcctcttgtgcaatcaaaagaacaaaaactaacgcacgca3600
    ............................................................
    ............................................................
    3601tattttggagaaaaactcgattttttacaaaataattttttgaaaggaacactgttcaat3660
    3601ataaaacctctttttgagctaaaaaatgttttattaaaaaactttccttgtgacaagtta3660
    ............................................................
    ............................................................
    3661aagttttgtcttttttctcagttgtgatacggttttttattcttttttgtagttatacag3720
    3661ttcaaaacagaaaaaagagtcaacactatgccaaaaaataagaaaaaacatcaatatgtc3720
    ............................................................
    ............................................................
    3721aagaccgttacgaaacagactgatatcgaaacaaacactgatcttacttgcacttataat3780
    3721ttctggcaatgctttgtctgactatagctttgtttgtgactagaatgaacgtgaatatta3780
    ............................................................
    SpeI(3788) BglII(3798).................. XhoI(3830)..........
    3781acgactcactagtgggcagatcttcgaatgcatcgcgcgcaccgtacgtctcgagtgtaa3840
    3781tgctgagtgatcacccgtctagaagcttacgtagcgcgcgtggcatgcagagctcacatt3840
    ............................................................
    ............................................................
    3841aacgacggccagtgaattatcaactatgtataataaagttgaacgagaaacgtaaaatga3900
    3841ttgctgccggtcacttaatagttgatacatattatttcaacttgctctttgcattttact3900
    M13_f20....................................... attR2 attR1
    ............................................................
    3901tataaatatcaatatattaaattagattttgcataaaaaacagactacataatactgtaa3960
    3901atatttatagttatataatttaatctaaaacgtattttttgtctgatgtattatgacatt3960
    ................... attR2 attR1.............................
    .................... NotI(3986)..............................
    3961aacacaacatatccagtcactatggcggccgcattaggcacccccaggctttacacttta4020
    3961ttgtgttgtataggtcagtgataccgccggcgtaatccgtgggggtccgaaatgtgaaat4020
    .......... attR1.............................. lac_pro
    ............................................................
    4021tgcttccggctcgtataatgtgtggattttgagttaggatccgtcgagattttcaggagc4080
    4021acgaaggccgagcatattacacacctaaaactcaatcctaggcagctctaaaagtcctcg4080
    lac_pro..................................................
    ............................................................
    4081taaggaagctaaaatggagaaaaaaatcactggatataccaccgttgatatatcccaatg4140
    4081attccttcgattttacctctttttttagtgacctatatggtggcaactatatagggttac4140
    ............................ ORF 2 CAT/CamR..................
    ............................................................
    4141gcatcgtaaagaacattttgaggcatttcagtcagttgctcaatgtacctataaccagac4200
    4141cgtagcatttcttgtaaaactccgtaaagtcagtcaacgagttacatggatattggtctg4200
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4201cgttcagctggatattacggcctttttaaagaccgtaaagaaaaataagcacaagtttta4260
    4201gcaagtcgacctataatgccggaaaaatttctggcatttctttttattcgtgttcaaaat4260
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4261tccggcctttattcacattcttgcccgcctgatgaatgctcatccggaattccgtatggc4320
    4261aggccggaaataagtgtaagaacgggcggactacttacgagtaggccttaaggcataccg4320
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4321aatgaaagacggtgagctggtgatatgggatagtgttcacccttgttacaccgttttcca4380
    4321ttactttctgccactcgaccactataccctatcacaagtgggaacaatgtggcaaaaggt4380
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4381tgagcaaactgaaacgttttcatcgctctggagtgaataccacgacgatttccggcagtt4440
    4381actcgtttgactttgcaaaagtagcgagacctcacttatggtgctgctaaaggccgtcaa4440
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4441tctacacatatattcgcaagatgtggcgtgttacggtgaaaacctggcctatttccctaa4500
    4441agatgtgtatataagcgttctacaccgcacaatgccacttttggaccggataaagggatt4500
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4501agggtttattgagaatatgtttttcgtctcagccaatccctgggtgagtttcaccagttt4560
    4501tcccaaataactcttatacaaaaagcagagtcggttagggacccactcaaagtggtcaaa4560
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4561tgatttaaacgtggccaatatggacaacttcttcgcccccgttttcaccatgggcaaata4620
    4561actaaatttgcaccggttatacctgttgaagaagcgggggcaaaagtggtacccgtttat4620
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4621ttatacgcaaggcgacaaggtgctgatgccgctggcgattcaggttcatcatgccgtttg4680
    4621aatatgcgttccgctgttccacgactacggcgaccgctaagtccaagtagtacggcaaac4680
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4681tgatggcttccatgtcggcagaatgcttaatgaattacaacagtactgcgatgagtggca4740
    4681actaccgaaggtacagccgtcttacgaattacttaatgttgtcatgacgctactcaccgt4740
    .................. ORF 2 CAT/CamR............................
    ............................................................
    4741gggcggggcgtaatctagaggatccggcttactaaaagccagataacagtatgcgtattt4800
    4741cccgccccgcattagatctcctaggccgaatgattttcggtctattgtcatacgcataaa4800
    ORF 2 CAT/CamR..............................................
    ............................................................
    4801gcgcgctgatttttgcggtataagaatatatactgatatgtatacccgaagtatgtcaaa4860
    4801cgcgcgactaaaaacgccatattcttatatatgactatacatatgggcttcatacagttt4860
    ............................................................
    ............................................................
    4861aagaggtatgctatgaagcagcgtattacagtgacagttgacagcgacagctatcagttg4920
    4861ttctccatacgatacttcgtcgcataatgtcactgtcaactgtcgctgtcgatagtcaac4920
    ............................................................
    ............................................................
    4921ctcaaggcatatatgatgtcaatatctccggttcggtaagcacaaccatgcagaatgaag4980
    4921gagttccgtatatactacagttatagaggccaagccattcgtgttggtacgtcttacttc4980
    ............................................................
    ............................................................
    4981cccgtcgtctgcgtgccgaacgctggaaagcggaaaatcaggaagggatggctgaggtcg5040
    4981gggcagcagacgcacggcttgcgacctttcgccttttagtccttccctaccgactccagc5040
    ............................................................
    ............................................................
    5041cccggtttattgaaatgaacggctcttttgccgacgagaacaggggctggtgaaatgcag5100
    5041gggccaaataactttacttgccgagaaaacggctgctcttgtccccgaccactttacgtc5100
    ............................................................
    ............................................................
    5101tttaaggtttacacctataaaagagagagccgttatcgtctgtttgtggatgtacagagt5160
    5101aaattccaaatgtggatattttctctctcggcaatagcagacaaacacctacatgtctca5160
    .................... ccdB..............................
    ............................................................
    5161gatattattgacacgcccgggcgacggatggtgatccccctggccagtgcacgtctgctg5220
    5161ctataataactgtgcgggcccgctgcctaccactagggggaccggtcacgtgcagacgac5220
    .................... ccdB..............................
    ............................................................
    5221tcagataaagtcccccgtgaactttacccggtggtgcatatcggggatgaaagctggcgc5280
    5221agtctatttcagggggcacttgaaatgggccaccacgtatagcccctactttcgaccgcg5280
    .................... ccdB..............................
    ............................................................
    5281atgatgaccaccgatatggccagtgtgccggtctccgttatcggggaagaagtggctgat5340
    5281tactactggtggctataccggtcacacggccagaggcaatagccccttcttcaccgacta5340
    .................... ccdB..............................
    ............................................................
    5341ctcagccaccgcgaaaatgacatcaaaaacgccattaacctgatgttctggggaatataa5400
    5341gagtcggtggcgcttttactgtagtttttgcggtaattggactacaagaccccttatatt5400
    .................... ccdB..............................
    ............................................................
    5401atgtcaggctcccttatacacagccagtctgcaggtcgaccatagtgactggatatgttg5460
    5401tacagtccgagggaatatgtgtcggtcagacgtccagctggtatcactgacctatacaac5460
    ....................................... attR1 attR2.........
    ............................................................
    5461tgttttacagtattatgtagtctgttttttatgcaaaatctaatttaatatattgatatt5520
    5461acaaaatgtcataatacatcagacaaaaaatacgttttagattaaattatataactataa5520
    ................... attR1 attR2.............................
    ............................................................
    5521tatatcattttacgtttctcgttcaacttttctatacaaagttgatagcttggcgtaatc5580
    5521atatagtaaaatgcaaagagcaagttgaaaagatatgtttcaactatcgaaccgcattag5580
    attR1 attR2........................................
    ................................................. AflII(5633)
    5581atggtcatagctgttcctgcctaggtgagctctggtaccctctagtcaaggccttaagtg5640
    5581taccagtatcgacaaggacggatccactcgagaccatgggagatcagttccggaattcac5640
    ............................................................
    ............................................................
    5641agtcgtattacgtagcccgggcctagttctagacattctctaatgaaaaaatctttcagt5700
    5641tcagcataatgcatcgggcccggatcaagatctgtaagagattacttttttagaaagtca5700
    ............................................................
    ............................................................
    5701tgaaattgaaaatgagttaaagttggagtttttattgaaaacagatttccgtgtgattag5760
    5701actttaacttttactcaatttcaacctcaaaaataacttttgtctaaaggcacactaatc5760
    ............................................................
    ............................................................
    5761tgtttttagcgagtgtgacaggacagcgaaaaaatatagaaacaaggggggaactgaaaa5820
    5761acaaaaatcgctcacactgtcctgtcgcttttttatatctttgttccccccttgactttt5820
    ............................................................
    ............................................................
    5821gcttaggaatgcattgaacatgagaaggggaaggggaaggaacaaactagacaggaatta5880
    5821cgaatccttacgtaacttgtactcttccccttccccttccttgtttgatctgtccttaat5880
    ............................................................
    ............................................................
    5881ttggaatttaatcacatttggagttttttttctattcgacagaataattatccagaacat5940
    5881aaccttaaattagtgtaaacctcaaaaaaaagataagctgtcttattaataggtcttgta5940
    ............................................................
    ............................................................
    5941ttttgtattaaatatttatgcatcatatgagtagtcggctttgttgtgcatgacgagttt6000
    5941aaaacataatttataaatacgtagtatactcatcagccgaaacaacacgtactgctcaaa6000
    ............................................................
    ............................................................
    6001gttatcgacgaaatagaagctgtcagaacgagtctcgtttggattgttgatcatgtcgtc6060
    6001caatagctgctttatcttcgacagtcttgctcagagcaaacctaacaactagtacagcag6060
    ............................................................
    ............................................................
    6061cactgaaaaagagattagtcttttgaattgtactttttagaataatgactcactgagttg6120
    6061gtgactttttctctaatcagaaaacttaacatgaaaaatcttattactgagtgactcaac6120
    ............................................................
    ............................................................
    6121ttgagagagttgagggaactcatagatatgttcacagttgtttcgtgaattcggaataca6180
    6121aactctctcaactcccttgagtatctatacaagtgtcaacaaagcacttaagccttatgt6180
    ............................................................
    ............................................................
    6181gaatccgaattcaaagtcaaaacacttcagaaggcgatctttgaagaagtgacgttcgat6240
    6181cttaggcttaagtttcagttttgtgaagtcttccgctagaaacttcttcactgcaagcta6240
    ............................................................
    ............................................................
    6241cattcggaaatgatggattgggatgtctcctactttgaattccacagttgctccgaccgt6300
    6241gtaagcctttactacctaaccctacagaggatgaaacttaaggtgtcaacgaggctggca6300
    ............................................................
    ............................................................
    6301tttgagtttcaaaaagtttggagcaaatctataacgcacgtatcttgccgactcctgtgg6360
    6301aaactcaaagtttttcaaacctcgtttagatattgcgtgcatagaacggctgaggacacc6360
    ............................................................
    ............................................................
    6361cgactcatcattctcctgatcgttctccggtttggcgatctcgaaaagcacttgctcagt6420
    6361gctgagtagtaagaggactagcaagaggccaaaccgctagagcttttcgtgaacgagtca6420
    ............................................................
    ............................................................
    6421gtccagatcacggatttggaacttggtgaactcgatgttatagatgttcgcagatgggga6480
    6421caggtctagtgcctaaaccttgaaccacttgagctacaatatctacaagcgtctacccct6480
    ............................................................
    ............................................................
    6481gcataagaatcctaaatttatgttttaaactgaaatccaaagggagcaagataccttgag6540
    6481cgtattcttaggatttaaatacaaaatttgactttaggtttccctcgttctatggaactc6540
    ............................................................
    ............................................................
    6541tgattcccggaagtgctaaaacgtcgttcggagtgatttgagctttcttcgcaagctccg6600
    6541actaagggccttcacgattttgcagcaagcctcactaaactcgaaagaagcgttcgaggc6600
    ............................................................
    ............................................................
    6601attccgttgtgattccttgttcggtgcttggtggtggccgtggcatctggaaatatggaa6660
    6601taaggcaacactaaggaacaagccacgaaccaccaccggcaccgtagacctttatacctt6660
    ............................................................
    ............................................................
    6661aagttcaacaaaaagaaaagagaaaagaatgaaatcggatatcaagagttagttgagcgg6720
    6661ttcaagttgtttttcttttctcttttcttactttagcctatagttctcaatcaactcgcc6720
    ............................................................
    ............................................................
    6721tttctctagttttctgagtctcacctgcgacgggaaggtcgccgagccgggtggaatcga6780
    6721aaagagatcaaaagactcagagtggacgctgcccttccagcggctcggcccaccttagct6780
    ............................................................
    ............................................................
    6781tcgttgttgctcggctttcatatcggtttggttggaagcggctgaaaacggaaagaagtg6840
    6781agcaacaacgagccgaaagtatagccaaaccaaccttcgccgacttttgcctttcttcac6840
    ............................................................
    ............................................................
    6841gaagaaggaaaagagtgtggtgtgacaggaaaatggtaattagagggtgccaaataacca6900
    6841cttcttccttttctcacaccacactgtccttttaccattaatctcccacggtttattggt6900
    ............................................................
    ............................................................
    6901gctatattttgtttttttttgaaaacatttttaaaaagaaaaatacgataatgatatcag6960
    6901cgatataaaacaaaaaaaaacttttgtaaaaatttttctttttatgctattactatagtc6960
    ............................................................
    ............................................................
    6961atggatttccggaaaactggtatgaaaaatttcaacctttttgagtacatgtaatcaaaa7020
    6961tacctaaaggccttttgaccatactttttaaagttggaaaaactcatgtacattagtttt7020
    ............................................................
    ............................................................
    7021tacactttgtaaattatcatttttattgaaactccaccatttttctatttataacgctaa7080
    7021atgtgaaacatttaatagtaaaaataactttgaggtggtaaaaagataaatattgcgatt7080
    ............................................................
    ............................. SacII(7111)...................
    7081taatttgaaaaagaaacctattgcgaaccgcggggtgaatcccaaaaacgaatgcgtttt7140
    7081attaaactttttctttggataacgcttggcgccccacttagggtttttgcttacgcaaaa7140
    ............................................................
    ............................................................
    7141ggtggagtgattgattcgaatcgaagaagaaaaagaagaagacgtggaatagagagctca7200
    7141ccacctcactaactaagcttagcttcttctttttcttcttctgcaccttatctctcgagt7200
    ............................................................
    ............................................................
    7201ctcttaaccgagcagcacacaccgacagaaaaaaaaatgaaatgaatgagggtcttcttc7260
    7201gagaattggctcgtcgtgtgtggctgtctttttttttactttacttactcccagaagaag7260
    ............................................................
    ............................................................
    7261ttcttcttcttcgaatgattgacagaaatgggaaaaagaggaagattgagaagggaaaaa7320
    7261aagaagaagaagcttactaactgtctttaccctttttctccttctaactcttcccttttt7320
    ............................................................
    ............................................................
    7321ggaaggagaaaagaagcagaagaagacgtcagagaggagaggaacgagcggaaaagcagc7380
    7321ccttcctcttttcttcgtcttcttctgcagtctctcctctccttgctcgccttttcgtcg7380
    ............................................................
    ............................................................
    7381gggcgcaagtcatagaagtagcagagctggggagaagaagacactatccaagaaaggaat7440
    7381cccgcgttcagtatcttcatcgtctcgacccctcttcttctgtgataggttctttcctta7440
    ............................................................
    ............................................................
    7441gacgagagagtatgcaaaggggtatagggtgcagacagaataggaacagaataacagatg7500
    7441ctgctctctcatacgtttccccatatcccacgtctgtcttatccttgtcttattgtctac7500
    ............................................................
    ............................................................
    7501atgagccaagaagagttgaaaagggcgatgaatttgtcatgtaacttaatttgggtcaat7560
    7501tactcggttcttctcaacttttcccgctacttaaacagtacattgaattaaacccagtta7560
    ............................................................
    ........................................ AgeI(7604)..........
    7561ttgagcatgatgaattgaaatcatcccttgttgggagttaataaccggtttgttatcaga7620
    7561aactcgtactacttaactttagtagggaacaaccctcaattattggccaaacaatagtct7620
    ............................................................
    ............................................................
    7621aaccctgtaatagaagggcgccctaactttgagccaattcatcccggtttctgtcaaata7680
    7621ttgggacattatcttcccgcgggattgaaactcggttaagtagggccaaagacagtttat7680
    ............................................................
    ............................................................
    7681tatcaaaaagtggtcaactgacaaattgtttttgatattataataaacattttatccgtt7740
    7681atagtttttcaccagttgactgtttaacaaaaactataatattatttgtaaaataggcaa7740
    ............................................................
    ............................................................
    7741aacaattttcgaatactttttacaaggacttggataaattggctcaaagacgaagtgagt7800
    7741ttgttaaaagcttatgaaaaatgttcctgaacctatttaaccgagtttctgcttcactca7800
    ............................................................
    ............................................................
    7801ttgctaccatcatggaatcaggaggacatttcgacaatgtcatataatgtttgaaaaatg7860
    7801aacgatggtagtaccttagtcctcctgtaaagctgttacagtatattacaaactttttac7860
    ............................................................
    ............................................................
    7861attttaacaagggtctcattcgagataagcaatgctctgagcaagtggctcgtcgtcttc7920
    7861taaaattgttcccagagtaagctctattcgttacgagactcgttcaccgagcagcagaag7920
    ............................................................
    ............................................................
    7921aagaatctcttgttgatattcatttggatcctgttttgcacgaagcatgtgccatggata7980
    7921ttcttagagaacaactataagtaaacctaggacaaaacgtgcttcgtacacggtacctat7980
    ............................................................
    ............................................................
    7981ttcagagtttttgcaaaaaagttccgccaggtcaaacaatctttttaatttttatatgat8040
    7981aagtctcaaaaacgttttttcaaggcggtccagtttgttagaaaaattaaaaatatacta8040
    ............................................................
    ............................................................
    8041acttcgggtgtatttttcttctttttcctgttcattttcgcttttttctcacttttttgt8100
    8041tgaagcccacataaaaagaagaaaaaggacaagtaaaagcgaaaaaagagtgaaaaaaca8100
    ............................................................
    ............................................................
    8101aacaaaatctctcacttttctgtaagtcttaacaaaagttcaattggctcgatcaagtaa8160
    8101ttgttttagagagtgaaaagacattcagaattgttttcaagttaaccgagctagttcatt8160
    ............................................................
    ............................................................
    8161aatttcggccgtatgaacgttttcaaaggttttcatttttttttaagttcattcacaata8220
    8161ttaaagccggcatacttgcaaaagtttccaaaagtaaaaaaaaattcaagtaagtgttat8220
    ............................................................
    ............................................................
    8221tcatgaatctctcgtcctttggtttccggtaagtagcgaaataatataagcatacttata8280
    8221agtacttagagagcaggaaaccaaaggccattcatcgctttattatattcgtatgaatat8280
    ............................................................
    ............................................................
    8281aatgaaggaattgaatatagaataaggaaagcataactaccaataacggaatatagaggt8340
    8281ttacttccttaacttatatcttattcctttcgtattgatggttattgccttatatctcca8340
    ............................................................
    ............................................................
    8341aatactgtaaatgtactgataaccaccattacagtattcattgaatatgccacagattga8400
    8341ttatgacatttacatgactattggtggtaatgtcataagtaacttatacggtgtctaact8400
    ............................................................
    ............................................................
    8401gcaatactacgatgtttttgaggtaccagttcagaggatataaaccacgaaattggacca8460
    8401cgttatgatgctacaaaaactccatggtcaagtctcctatatttggtgctttaacctggt8460
    ............................................................
    ............................................................
    8461actccagttctgaaatttcattattcgattaaatcaaaatatatttgaaaaacctcaccc8520
    8461tgaggtcaagactttaaagtaataagctaatttagttttatataaactttttggagtggg8520
    ............................................................
    ............................................................
    8521ataagtataaccgtagatgatcaatgcaactaggcatccgtatttcatcgggtcaatcag8580
    8521tattcatattggcatctactagttacgttgatccgtaggcataaagtagcccagttagtc8580
    ............................................................
    ............................................................
    8581aatacgtatttttgcgaagaatacgaatgcaattagagctaaattattgagaaatgtgaa8640
    8581ttatgcataaaaacgcttcttatgcttacgttaatctcgatttaataactctttacactt8640
    ............................................................
    ............................................................
    8641gagaaggagaagcttgcgtcgaccaactctgtaaacttattcatacaattttgtcttcaa8700
    8641ctcttcctcttcgaacgcagctggttgagacatttgaataagtatgttaaaacagaagtt8700
    ............................................................
    ............................................................
    8701attttgaacgtttaaaactatcttattcaatgagttagcgggtttttatagtgagttagt8760
    8701taaaacttgcaaattttgatagaataagttactcaatcgcccaaaaatatcactcaatca8760
    ............................................................
    ............................................................
    8761tcacgattatctaataaaactatgtccaaacatcctaactgcgaccgtattctcactaac8820
    8761agtgctaatagattattttgatacaggtttgtaggattgacgctggcataagagtgattg8820
    ............................................................
    ............................................................
    8821tcgtcttaaaaacgttgagattattttaaacccttcttcagtacaactacagtactgatg8880
    8821agcagaatttttgcaactctaataaaatttgggaagaagtcatgttgatgtcatgactac8880
    ............................................................
    ............................................................
    8881cacaaatacaataataataatacattcagacatactctgaacaatgtaacttgtttttgt8940
    8881gtgtttatgttattattattatgtaagtctgtatgagacttgttacattgaacaaaaaca8940
    ............................................................
    ............................................................
    8941tatactgtggtaacatttattgaaatgaaatataaccttacttttcaatcacaattccac9000
    8941atatgacaccattgtaaataactttactttatattggaatgaaaagttagtgttaaggtg9000
    ............................................................
    ............................................................
    9001cagtaattgttccagaaacataagctaaacccattgcagttgtactccattcagcaattt9060
    9001gtcattaacaaggtctttgtattcgatttgggtaacgtcaacatgaggtaagtcgttaaa9060
    ............................................................
    ............................................................
    9061ctgactcaacatttgcattttctagaaagaaagtagaggataaaagaagagcccataatc9120
    9061gactgagttgtaaacgtaaaagatctttctttcatctcctattttcttctcgggtattag9120
    ............................................................
    ApaI(9130)..................................................
    9121cgacagggccchelpblastnblastprogramsfindregionsofsimilaritybet9180
    9121gctgtcccgggdelpvltsanvltsapyocytksfinhyecionsofsikiltyiarvea9180
    ............................................................
    ............................................................
    9181weenbiologicalsequencesblastnsearchesncbisdnadatabasefordnas9240
    9181weenviolocigtlseqaengesvltsansetygdesngvishnthtatvtsefoyhnts9240
    ............................................................
    ............................................................
    9241equencessimilartoyoursequencehelpmoresequenceoptionsviewthes9300
    9241eqaengessikiltyaoroayseqaengedelpkoyeseqaengeopaionsbiewades9300
    ............................................................
    ............................................................
    9301equenceindifferentformatsfindrestrictionsitesviewopenreading9360
    9301eqaengeinhiffeyenafoyktasfinhyesayigaionsiaesbiewopenyethinc9360
    ............................................................
    ............................................................
    9361frametranslationsandmorehelpfultipclickontheanalyzesequenceb9420
    9361fytkeaytnsltaionstnhkoyedelpfalaipgligmonadetntlrzeseqaengev9420
    ............................................................
    ............................................................
    9421uttontoseerestrictionsitesvieworfsetcaddgenessequencingresul9480
    9421aaaonaoseeyesayigaionsiaesbiewoyfseagthhcenesseqaengincyesal9480
    ............................................................
    ............................................................
    9481ts..........................................................9482
    9481as..........................................................9482
    ............................................................

    References



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