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  • BVTech Plasmid

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    Sequence of pCFJ90

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    Sequence of pCFJ90 - Pmyo-2::mCherry::unc-54utr : 5109 BP; 1414 A; 1138 C; 1117 G; 1440 T; 0 other;

    ............................................................
    1gtatagaaaagttgcattttatatctgagtagtatcctttgctttaaatgtccataaaac60
    1catatcttttcaacgtaaaatatagactcatcataggaaacgaaatttacaggtattttg60
    ............................................................
    ............................................................
    61taattttataatcaataaaacaacgtttgtaaatcaactgagtttacaagtagagacatt120
    61attaaaatattagttattttgttgcaaacatttagttgactcaaatgttcatctctgtaa120
    ............................................................
    ............................................................
    121gagggatactttcactatgctaaagtgataatcgaccaaataataacttcactttggtat180
    121ctccctatgaaagtgatacgatttcactattagctggtttattattgaagtgaaaccata180
    ............................................................
    ............................................................
    181ttattcctgtcttataaatgttatgtatgaattaaattcatatgcatatggctcactctg240
    181aataaggacagaatatttacaatacatacttaatttaagtatacgtataccgagtgagac240
    ............................................................
    ............................................................
    241acaatttttaataatcttccagatcaatattgactaccgatgcgggtggtcttttgcttt300
    241tgttaaaaattattagaaggtctagttataactgatggctacgcccaccagaaaacgaaa300
    ............................................................
    EcoRI(301)..................................................
    301gaattctgctgaactttacaccccgaacagcaatgtgtgcttcagcctaaaaaaaagtaa360
    301cttaagacgacttgaaatgtggggcttgtcgttacacacgaagtcggattttttttcatt360
    ............................................................
    ............................................................
    361gtgtgttaatcagtgcccccgattcttcattttttgcccctctctcccgtttcgtcggca420
    361cacacaattagtcacgggggctaagaagtaaaaaacggggagagagggcaaagcagccgt420
    ............................................................
    ............................................................
    421aaagaagagaaaataaagataagtctcaagataggttggtaatcgctaaagtggttgtgt480
    421tttcttctcttttatttctattcagagttctatccaaccattagcgatttcaccaacaca480
    ............................................................
    ............................................................
    481ggataagagtagcaaaatggcaggaagagcactttgcgcgcacacactgtactcattgtt540
    481cctattctcatcgttttaccgtccttctcgtgaaacgcgcgtgtgtgacatgagtaacaa540
    ............................................................
    ............................................................
    541ctggataaaattctctcgttgtttgccgtcggatgtctgcctctctgcattgagccggct600
    541gacctattttaagagagcaacaaacggcagcctacagacggagagacgtaactcggccga600
    ............................................................
    .......... HpaI(618)........................................
    601tcttcactatctttagttaacctaaaatgccgtttcttttctcgtatccccactatcccg660
    601agaagtgatagaaatcaattggattttacggcaaagaaaagagcataggggtgatagggc660
    ............................................................
    ............................................................
    661ttgaggttctctgctctcttcgctccctaccgccagcgagcaactatccgtgggggcgcc720
    661aactccaagagacgagagaagcgagggatggcggtcgctcgttgataggcacccccgcgg720
    ............................................................
    ............................................................
    721ttgctcggaagatgggggggaagaaagaagatttttgctatttgcacttgagaaagagac780
    721aacgagccttctacccccccttctttcttctaaaaacgataaacgtgaactctttctctg780
    ............................................................
    ............................................................
    781ttttcctgcgtcgatggttagagaacagtgtgcagacacttttcagctacctagaattac840
    781aaaaggacgcagctaccaatctcttgtcacacgtctgtgaaaagtcgatggatcttaatg840
    ............................................................
    ............................................................
    841aattggatatccccgcctcccaatccacccacccagggaaaaagaagggctcgccgaaaa900
    841ttaacctataggggcggagggttaggtgggtgggtccctttttcttcccgagcggctttt900
    ............................................................
    ............................................................
    901tcaaagttatctccaggctcgcgcatcccaccgagcggttgacttctctccaccactttt960
    901agtttcaatagaggtccgagcgcgtagggtggctcgccaactgaagagaggtggtgaaaa960
    ............................................................
    ............................................................
    961cattttaaccctcgatcgtcagacacagaaatgacaagtttgtacaaaaaagcaggctta1020
    961gtaaaattgggagctagcagtctgtgtctttactgttcaaacatgttttttcgtccgaat1020
    ....................................... attB1 ORF 1.........
    ............................................................
    1021atggtctcaaagggtgaagaagataacatggcaattattaaagagtttatgcgtttcaag1080
    1021taccagagtttcccacttcttctattgtaccgttaataatttctcaaatacgcaaagttc1080
    .................... ORF 1..............................
    ............................................................
    1081gtgcatatggagggatctgtcaatgggcatgagtttgaaattgaaggtgaaggagaaggc1140
    1081cacgtatacctccctagacagttacccgtactcaaactttaacttccacttcctcttccg1140
    .................... ORF 1..............................
    ............................................................
    1141cgaccatatgagggaacacaaaccgcaaaactaaaggtaagtttaaacatatatatacta1200
    1141gctggtatactcccttgtgtttggcgttttgatttccattcaaatttgtatatatatgat1200
    .................... ORF 1..............................
    ............................................................
    1201actaaccctgattatttaaattttcaggtaactaaaggcggaccattaccattcgcctgg1260
    1201tgattgggactaataaatttaaaagtccattgatttccgcctggtaatggtaagcggacc1260
    .................... ORF 1..............................
    ............................................................
    1261gacatcctctctccacagttcatgtatggaagtaaagcttatgttaaacatccggcagat1320
    1261ctgtaggagagaggtgtcaagtacataccttcatttcgaatacaatttgtaggccgtcta1320
    .................... ORF 1..............................
    ............................................................
    1321ataccagattatttgaaactttcattcccggagggttttaagtgggaacgcgtaatgaat1380
    1321tatggtctaataaactttgaaagtaagggcctcccaaaattcacccttgcgcattactta1380
    .................... ORF 1..............................
    ............................................................
    1381tttgaagacggaggagttgttacagtgacgcaagactcaaggtaagtttaaacagttcgg1440
    1381aaacttctgcctcctcaacaatgtcactgcgttctgagttccattcaaatttgtcaagcc1440
    .................... ORF 1..............................
    ............................................................
    1441tactaactaaccatacatatttaaattttcagcctccaagatggagaatttatttataaa1500
    1441atgattgattggtatgtataaatttaaaagtcggaggttctacctcttaaataaatattt1500
    .................... ORF 1..............................
    ............................................................
    1501gtcaaacttcgaggaacgaatttcccctcggatggacctgttatgcagaagaagactatg1560
    1501cagtttgaagctccttgcttaaaggggagcctacctggacaatacgtcttcttctgatac1560
    .................... ORF 1..............................
    ....................................... AflII(1606).........
    1561ggatgggaagcttcaagtgaaagaatgtaccctgaagacggtgctcttaagggagagatt1620
    1561cctacccttcgaagttcactttcttacatgggacttctgccacgagaattccctctctaa1620
    .................... ORF 1..............................
    ............................................................
    1621aaacaacgtcttaaattgaaagatggaggacattacgatgctgaggtaagtttaaacatg1680
    1621tttgttgcagaatttaactttctacctcctgtaatgctacgactccattcaaatttgtac1680
    .................... ORF 1..............................
    ............................................................
    1681attttactaactaactaatctgatttaaattttcaggtgaagacaacttacaaagccaaa1740
    1681taaaatgattgattgattagactaaatttaaaagtccacttctgttgaatgtttcggttt1740
    .................... ORF 1..............................
    ............................................................
    1741aaaccagttcagctgccaggagcgtacaatgttaatattaaactggatatcacctcccac1800
    1741tttggtcaagtcgacggtcctcgcatgttacaattataatttgacctatagtggagggtg1800
    .................... ORF 1..............................
    ............................................................
    1801aacgaggattacactatcgttgagcaatatgaaagagctgaagggcggcactcgacaggt1860
    1801ttgctcctaatgtgatagcaactcgttatactttctcgacttcccgccgtgagctgtcca1860
    .................... ORF 1..............................
    ............................................................
    1861ggcatggatgaattgtataagtagtacccagctttcttgtacaaagtggtgatatctgag1920
    1861ccgtacctacttaacatattcatcatgggtcgaaagaacatgtttcaccactatagactc1920
    .......... ORF 1.......... attB2....................
    SacI(1922) EagI(1929)......................................
    1921ctccgcatcggccgctgtcatcagatcgccatctcgcgcccgtgcctctgacttctaagt1980
    1921gaggcgtagccggcgacagtagtctagcggtagagcgcgggcacggagactgaagattca1980
    ............................................................
    ............................................................
    1981ccaattactcttcaacatccctacatgctctttctccctgtgctcccaccccctattttt2040
    1981ggttaatgagaagttgtagggatgtacgagaaagagggacacgagggtgggggataaaaa2040
    ............................................................
    ............................................................
    2041gttattatcaaaaaacttctcttaatttctttgttttttagcttcttttaagtcacctct2100
    2041caataatagttttttgaagagaattaaagaaacaaaaaatcgaagaaaattcagtggaga2100
    ............................................................
    ............................................................
    2101aacaatgaaattgtgtagattcaaaaatagaattaattcgtaataaaaagtcgaaaaaaa2160
    2101ttgttactttaacacatctaagtttttatcttaattaagcattatttttcagcttttttt2160
    ............................................................
    ............................................................
    2161ttgtgctccctccccccattaataataattctatcccaaaatctacacaatgttctgtgt2220
    2161aacacgagggaggggggtaattattattaagatagggttttagatgtgttacaagacaca2220
    ............................................................
    ............................................................
    2221acacttcttatgttttttacttctgataaatttttttgaaacatcatagaaaaaaccgca2280
    2221tgtgaagaatacaaaaaatgaagactatttaaaaaaactttgtagtatcttttttggcgt2280
    ............................................................
    ............................................................
    2281cacaaaataccttatcatatgttacgtttcagtttatgaccgcaatttttatttcttcgc2340
    2281gtgttttatggaatagtatacaatgcaaagtcaaatactggcgttaaaaataaagaagcg2340
    ............................................................
    ............................................................
    2341acgtctgggcctctcatgacgtcaaatcatgctcatcgtgaaaaagttttggagtatttt2400
    2341tgcagacccggagagtactgcagtttagtacgagtagcactttttcaaaacctcataaaa2400
    ............................................................
    ............................................................
    2401tggaatttttcaatcaagtgaaagtttatgaaattaattttcctgcttttgctttttggg2460
    2401accttaaaaagttagttcactttcaaatactttaattaaaaggacgaaaacgaaaaaccc2460
    ............................................................
    ............................................................
    2461gtttcccctattgtttgtcaagatttcgaggacggcgtttttcttgctaaaatcacaagt2520
    2461caaaggggataacaaacagttctaaagctcctgccgcaaaaagaacgattttagtgttca2520
    ............................................................
    ............................................................
    2521attgatgagcacgatgcaagaaagatcggaagaaggtttgggtttgaggctcagtggaag2580
    2521taactactcgtgctacgttctttctagccttcttccaaacccaaactccgagtcaccttc2580
    ............................................................
    ............................................................
    2581gtgagtagaagttgataatttgaaagtggagtagtgtctatggggtttttgccttaaatg2640
    2581cactcatcttcaactattaaactttcacctcatcacagataccccaaaaacggaatttac2640
    ............................................................
    ............................................................
    2641acagaatacattcccaatataccaaacataactgtttccaactttattatacatagttga2700
    2641tgtcttatgtaagggttatatggtttgtattgacaaaggttgaaataatatgtatcaact2700
    ............................................................
    ............................................................
    2701taattcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaact2760
    2701attaagtgaccggcagcaaaatgttgcagcactgacccttttgggaccgcaatgggttga2760
    ... M13_forward20_pri M13_pUC_fwd_pri lacZ_a.............
    ............................................................
    2761taatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcac2820
    2761attagcggaacgtcgtgtagggggaaagcggtcgaccgcattatcgcttctccgggcgtg2820
    .................... lacZ_a..............................
    ............................................................
    2821cgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgcctgatgcggtattt2880
    2821gctagcgggaagggttgtcaacgcgtcggacttaccgcttaccgcggactacgccataaa2880
    .......... lacZ_a........................................
    ............................................................
    2881tctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagtacaatctg2940
    2881agaggaatgcgtagacacgccataaagtgtggcgtataccacgtgagagtcatgttagac2940
    ............................................................
    ............................................................
    2941ctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctg3000
    2941gagactacggcgtatcaattcggtcggggctgtgggcggttgtgggcgactgcgcgggac3000
    ............................................................
    ............................................................
    3001acgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctg3060
    3001tgcccgaacagacgagggccgtaggcgaatgtctgttcgacactggcagaggccctcgac3060
    .................................................. pGEX_3_pri
    ............................................................
    3061catgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgat3120
    3061gtacacagtctccaaaagtggcagtagtggctttgcgcgctctgctttcccggagcacta3120
    pGEX_3_pri..................................................
    ............................................................
    3121acgcctatttttataggttaatgtcatgataataatggtttcttagacgtcaggtggcac3180
    3121tgcggataaaaatatccaattacagtactattattaccaaagaatctgcagtccaccgtg3180
    ............................................................
    ............................................................
    3181ttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatat3240
    3181aaaagcccctttacacgcgccttggggataaacaaataaaaagatttatgtaagtttata3240
    .................................................. AmpR_pro
    ............................................................
    3241gtatccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagag3300
    3241cataggcgagtactctgttattgggactatttacgaagttattataactttttccttctc3300
    AmpR_pro..................................................
    ............................................................
    3301tatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcc3360
    3301atactcataagttgtaaaggcacagcgggaataagggaaaaaacgccgtaaaacggaagg3360
    ........................... ORF 2 Ampicillin.................
    ............................................................
    3361tgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgc3420
    3361acaaaaacgagtgggtctttgcgaccactttcattttctacgacttctagtcaacccacg3420
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3421acgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgccc3480
    3421tgctcacccaatgtagcttgacctagagttgtcgccattctaggaactctcaaaagcggg3480
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3481cgaagaacgttttccaatgatgagcacttttaaagttctgctatgtggcgcggtattatc3540
    3481gcttcttgcaaaaggttactactcgtgaaaatttcaagacgatacaccgcgccataatag3540
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3541ccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgactt3600
    3541ggcataactgcggcccgttctcgttgagccagcggcgtatgtgataagagtcttactgaa3600
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3601ggttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaatt3660
    3601ccaactcatgagtggtcagtgtcttttcgtagaatgcctaccgtactgtcattctcttaa3660
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3661atgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgat3720
    3661tacgtcacgacggtattggtactcactattgtgacgccggttgaatgaagactgttgcta3720
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3721cggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgcct3780
    3721gcctcctggcttcctcgattggcgaaaaaacgtgttgtaccccctagtacattgagcgga3780
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3781tgatcgttgggaaccggagctgaatgaagccataccaaacgacgagcgtgacaccacgat3840
    3781actagcaacccttggcctcgacttacttcggtatggtttgctgctcgcactgtggtgcta3840
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3841gcctgtagcaatggcaacaacgttgcgcaaactattaactggcgaactacttactctagc3900
    3841cggacatcgttaccgttgttgcaacgcgtttgataattgaccgcttgatgaatgagatcg3900
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3901ttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcg3960
    3901aagggccgttgttaattatctgacctacctccgcctatttcaacgtcctggtgaagacgc3960
    ................. ORF 2 Ampicillin...........................
    ............................................................
    3961ctcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtc4020
    3961gagccgggaaggccgaccgaccaaataacgactatttagacctcggccactcgcacccag4020
    ................. ORF 2 Ampicillin...........................
    ............................................................
    4021tcgcggtatcattgcagcactggggccagatggtaagccctcccgtatcgtagttatcta4080
    4021agcgccatagtaacgtcgtgaccccggtctaccattcgggagggcatagcatcaatagat4080
    ................. ORF 2 Ampicillin...........................
    ............................................................
    4081cacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgc4140
    4081gtgctgcccctcagtccgttgatacctacttgctttatctgtctagcgactctatccacg4140
    ................. ORF 2 Ampicillin...........................
    ............................................................
    4141ctcactgattaagcattggtaactgtcagaccaagtttactcatatatactttagattga4200
    4141gagtgactaattcgtaaccattgacagtctggttcaaatgagtatatatgaaatctaact4200
    ....... ORF 2 Ampicillin.....................................
    ............................................................
    4201tttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataatctcat4260
    4201aaattttgaagtaaaaattaaattttcctagatccacttctaggaaaaactattagagta4260
    ............................................................
    ............................................................
    4261gaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagat4320
    4261ctggttttagggaattgcactcaaaagcaaggtgactcgcagtctggggcatcttttcta4320
    ............................................................
    ............................................................
    4321caaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaa4380
    4321gtttcctagaagaactctaggaaaaaaagacgcgcattagacgacgaacgtttgtttttt4380
    .................. pBR322_origin............................
    ............................................................
    4381accaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaa4440
    4381tggtggcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggctt4440
    .................. pBR322_origin............................
    ............................................................
    4441ggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagtt4500
    4441ccattgaccgaagtcgtctcgcgtctatggtttatgacaggaagatcacatcggcatcaa4500
    .................. pBR322_origin............................
    ............................................................
    4501aggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgtt4560
    4501tccggtggtgaagttcttgagacatcgtggcggatgtatggagcgagacgattaggacaa4560
    .................. pBR322_origin............................
    ............................................................
    4561accagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgata4620
    4561tggtcaccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgctat4620
    .................. pBR322_origin............................
    ............................................................
    4621gttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagctt4680
    4621caatggcctattccgcgtcgccagcccgacttgccccccaagcacgtgtgtcgggtcgaa4680
    .................. pBR322_origin............................
    ............................................................
    4681ggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccac4740
    4681cctcgcttgctggatgtggcttgactctatggatgtcgcactcgatactctttcgcggtg4740
    .................. pBR322_origin............................
    ............................................................
    4741gcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggaga4800
    4741cgaagggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcctct4800
    .................. pBR322_origin............................
    ............................................................
    4801gcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggtttcg4860
    4801cgcgtgctccctcgaaggtccccctttgcggaccatagaaatatcaggacagcccaaagc4860
    .................. pBR322_origin............................
    ............................................................
    4861ccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaa4920
    4861ggtggagactgaactcgcagctaaaaacactacgagcagtccccccgcctcggatacctt4920
    .................. pBR322_origin............................
    ............................................................
    4921aaacgccagcaacgcggcctttttacggttcctggtcttttgctggccttttgctcacat4980
    4921tttgcggtcgttgcgccggaaaaatgccaaggaccagaaaacgaccggaaaacgagtgta4980
    pBR322_origin..............................................
    ............................................................
    4981gttctttcctgcgttatcccctgattctgtggataaccgtattaccgcctttgagtgagc5040
    4981caagaaaggacgcaataggggactaagacacctattggcataatggcggaaactcactcg5040
    ............................................................
    ............................................................
    5041tgataccagcggataacaatttcacacaggaaacagctatgaccatgattacgccaagct5100
    5041actatggtcgcctattgttaaagtgtgtcctttgtcgatactggtactaatgcggttcga5100
    ....... M13_pUC_rev_pri.... M13_reverse_pri.................
    ............................................................
    5101atcaacttt...................................................5109
    5101tagttgaaa...................................................5109
    ............................................................

    References



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