|
Search plasmid maps in this site
|
|
|
|
|
More Plasmid Map Templates
|
|
|
|
|
BVTech Plasmid
|
|
This sequnce graph is created using BVTech Plasmid, which is DNA sequence analysis and plasmid drawing software for Windows PCs.You can
use it to plan your DNA cloning, draw high quality plasmid maps, analyse your DNA sequencing data,
align sequences, and much more.
Free to try, $39.98 to buy
Payments will be processed by PayPal. PayPal is the safer, easier way to pay.
|
|
|
|
|
|
|
Sequence of pECFP-C1
Download the sequence and plasmid map,
and then use BVTech Plasmid to view and edit the file.
If you do not have BVTech Plasmid, download the latest version of BVTech Plasmid here.
View the plasmid map on line
Sequence of pECFP-C1
: 4731 BP; 1138 A; 1286 C; 1244 G; 1063 T; 0 other; |
| AseI(7) | .......... | .......... | .......... | .......... | .......... |
| 1 | tagttattaa | tagtaatcaa | ttacggggtc | attagttcat | agcccatata | tggagttccg | 60 |
| 1 | atcaataatt | atcattagtt | aatgccccag | taatcaagta | tcgggtatat | acctcaaggc | 60 |
| .......... | .......... | ....... | CMV_immearly_pro | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | cgttacataa | cttacggtaa | atggcccgcc | tggctgaccg | cccaacgacc | <
font color="#000000" style="font-size:10px" face="Courier">cccgcccatt | 120 |
| 61 | gcaatgtatt | gaatgccatt | taccgggcgg | accgactggc | gggttgctgg | gggcgggtaa | 120 |
| .......... | ....... | CMV_immearly_pro | CAG_enh | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | gacgtcaata | atgacgtatg | ttcccatagt | aacgccaata | gggactttcc |
attgacgtca | 180 |
| 121 | ctgcagttat | tactgcatac | aagggtatca | ttgcggttat | ccctgaaagg | taactgcagt | 180 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | NdeI(234) |
| 181 | atgggtggag | tatttacggt | aaactgccca | cttggcagta | catcaagtgt |
atcatatgcc | 240 |
| 181 | tacccacctc | ataaatgcca | tttgacgggt | gaaccgtcat | gtagttcaca | tagtatacgg | 240 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 241 | aagtacgccc | cctattgacg | tcaatgacgg | taaatggccc | gcctggcatt |
atgcccagta | 300 |
| 241 | ttcatgcggg | ggataactgc | agttactgcc | atttaccggg | cggaccgtaa | tacgggtcat | 300 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | catgacctta | tgggactttc | ctacttggca | gtacatctac | gtattagtca |
tcgctattac | 360 |
| 301 | gtactggaat | accctgaaag | gatgaaccgt | catgtagatg | cataatcagt | agcgataatg | 360 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | catggtgatg | cggttttggc | agtacatcaa | tgggcgtgga | tagcggtttg | actcacgggg | 420 |
| 361 | gtaccactac | gccaaaaccg | tcatgtagtt | acccgcacct | atcgccaaac | tgagtgcccc | 420 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | atttccaagt | ctccacccca | ttgacgtcaa | tgggagtttg | ttttggcacc | aaaatcaacg | 480 |
| 421 | taaaggttca | gaggtggggt | aactgcagtt | accctcaaac | aaaaccgtgg | ttttagttgc | 480 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | ggactttcca | aaatgtcgta | acaactccgc | cccattgacg | caaatgggcg | gtaggcgtgt | 540 |
| 481 | cctgaaaggt | tttacagcat | tgttgaggcg | gggtaactgc | gtttacccgc | catccgcaca | 540 |
| .......... | ....... | CMV_immearly_pro | .. | CMV_fwd_pri CMV_pro | ..... |
| .......... | .......... | .......... | .......... | ..... | NheI(591) AgeI(600) |
| 541 | acggtgggag | gtctatataa | gcagagctgg | tttagtgaac | cgtcagatcc | gctagcgcta | 600 |
| 541 | tgccaccctc | cagatatatt | cgtctcgacc | aaatcacttg | gcagtctagg | cgatcgcgat | 600 |
| ....... | CMV_immearly_pro | CMV_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 601 | ccggtcgcca | ccatggtgag | caagggcgag | gagctgttca | ccggggtggt | gcccatcctg | 660 |
| 601 | ggccagcggt | ggtaccactc | gttcccgctc | ctcgacaagt | ggccccacca | cgggtaggac | 660 |
| .......... | .......... | ORF 1 | ECFP ORF 1 | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 661 | gtcgagctgg | acggcgacgt | aaacggccac | aagttcagcg | tgtccggcga |
gggcgagggc | 720 |
| 661 | cagctcgacc | tgccgctgca | tttgccggtg | ttcaagtcgc | acaggccgct | cccgctcccg | 720 |
| EGFP_N_pri | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | gatgccacct | acggcaagct | gaccctgaag | ttcatctgca | ccaccggcaa |
gctgcccgtg | 780 |
| 721 | ctacggtgga | tgccgttcga | ctgggacttc | aagtagacgt | ggtggccgtt | cgacgggcac | 780 |
| .......... | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 781 | ccctggccca | ccctcgtgac | caccctgacc | tggggcgtgc | agtgcttcag |
ccgctacccc | 840 |
| 781 | gggaccgggt | gggagcactg | gtgggactgg | accccgcacg | tcacgaagtc | ggcgatgggg | 840 |
| .......... | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | gaccacatga | agcagcacga | cttcttcaag | tccgccatgc | ccgaaggcta |
cgtccaggag | 900 |
| 841 | ctggtgtact | tcgtcgtgct | gaagaagttc | aggcggtacg | ggcttccgat | gcaggtcctc | 900 |
| .......... | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | cgcaccatct | tcttcaagga | cgacggcaac | tacaagaccc | gcgccgaggt |
gaagttcgag | 960 |
| 901 | gcgtggtaga | agaagttcct | gctgccgttg | atgttctggg | cgcggctcca | cttcaagctc | 960 |
| .......... | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | ggcgacaccc | tggtgaaccg | catcgagctg | aagggcatcg | acttcaagga |
ggacggcaac | 1020 |
| 961 | ccgctgtggg | accacttggc | gtagctcgac | ttcccgtagc | tgaagttcct | cctgccgttg | 1020 |
| .......... | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1021 | atcctggggc | acaagctgga | gtacaactac | atcagccaca | acgtctatat | caccgccgac | 1080 |
| 1021 | taggaccccg | tgttcgacct | catgttgatg | tagtcggtgt | tgcagatata | gtggcggctg | 1080 |
| .......... | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1081 | aagcagaaga | acggcatcaa | ggccaacttc | aagatccgcc | acaacatcga | ggacggcagc | 1140 |
| 1081 | ttcgtcttct | tgccgtagtt | ccggttgaag | ttctaggcgg | tgttgtagct | cctgccgtcg | 1140 |
| .......... | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | gtgcagctcg | ccgaccacta | ccagcagaac | acccccatcg | gcgacggccc | cgtgctgctg | 1200 |
| 1141 | cacgtcgagc | ggctggtgat | ggtcgtcttg | tgggggtagc | cgctgccggg | gcacgacgac | 1200 |
| .......... | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | cccgacaacc | actacctgag | cacccagtcc | gccctgagca | aagaccccaa | cgagaagcgc | 1260 |
| 1201 | gggctgttgg | tgatggactc | gtgggtcagg | cgggactcgt | ttctggggtt | gctcttcgcg | 1260 |
| .......... | ....... | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1261 | gatcacatgg | tcctgctgga | gttcgtgacc | gccgccggga | tcactctcgg | catggacgag | 1320 |
| 1261 | ctagtgtacc | aggacgacct | caagcactgg | cggcggccct | agtgagagcc | gtacctgctc | 1320 |
| ....... | EGFP_C_pri | ORF 1 ECFP ORF 1 | ....... | .......... | .......... |
| | BglII,XhoI | SacI,HindIII EcoRI | PstI368),SalI(1369) | |
| 1321 | ctgtacaagt | ccggactcag | atctcgagct | caagcttcga | attctgcagt | cgacggtacc | 1380 |
| 1321 | gacatgttca | ggcctgagtc | tagagctcga | gttcgaagct | taagacgtca | gctgccatgg | 1380 |
| ECFP | ......... | ORF 1 ORF 1 | ......... | .......... | .......... |
| SacII,ApaI,SmaI,BamHI(1390) | | XbaI(1402) | BclI(1412) | | |
| 1381 | gcgggcccgg | gatccaccgg | atctagataa | ctgatcataa | tcagccatac | cacatttgta | 1440 |
| 1381 | cgcccgggcc | ctaggtggcc | tagatctatt | gactagtatt | agtcggtatg | gtgtaaacat | 1440 |
| .......... | ORF 1 | ORF 1 | ......... | SV40_PA_term | ......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1441 | gaggttttac | ttgctttaaa | aaacctccca | cacctccccc | tgaacctgaa | acataaaatg | 1500 |
| 1441 | ctccaaaatg | aacgaaattt | tttggagggt | gtggaggggg | acttggactt | tgtattttac | 1500 |
| .......... | ......... | SV40_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | aatgcaattg | ttgttgttaa | cttgtttatt | gcagcttata | atggttacaa | ataaagcaat | 1560 |
| 1501 | ttacgttaac | aacaacaatt | gaacaaataa | cgtcgaatat | taccaatgtt | tatttcgtta | 1560 |
| .......... | ......... | SV40_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1561 | agcatcacaa | atttcacaaa | taaagcattt | ttttcactgc | attctagttg | tggtttgtcc | 1620 |
| 1561 | tcgtagtgtt | taaagtgttt | atttcgtaaa | aaaagtgacg | taagatcaac | accaaacagg | 1620 |
| .......... | ......... | SV40_PA_term | ......... | ......... | EBV_rev_pri |
| ......... | AflII(1637) | ......... | .......... | .......... | .......... |
| 1621 | aaactcatca | atgtatctta | aggcgtaaat | tgtaagcgtt | aatattttgt | taaaattcgc | 1680 |
| 1621 | tttgagtagt | tacatagaat | tccgcattta | acattcgcaa | ttataaaaca | attttaagcg | 1680 |
| SV40_PA_term EBV_rev_pri | | ...... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1681 | gttaaatttt | tgttaaatca | gctcattttt | taaccaatag | gccgaaatcg | gcaaaatccc | 1740 |
| 1681 | caatttaaaa | acaatttagt | cgagtaaaaa | attggttatc | cggctttagc | cgttttaggg | 1740 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | ttataaatca | aaagaataga | ccgagatagg | gttgagtgtt | gttccagttt | ggaacaagag | 1800 |
| 1741 | aatatttagt | tttcttatct | ggctctatcc | caactcacaa | caaggtcaaa | ccttgttctc | 1800 |
| .......... | .......... | .......... | .......... | f1_origin | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | tccactatta | aagaacgtgg | actccaacgt | caaagggcga | aaaaccgtct | atcagggcga | 1860 |
| 1801 | aggtgataat | ttcttgcacc | tgaggttgca | gtttcccgct | ttttggcaga | tagtcccgct | 1860 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1861 | tggcccacta | cgtgaaccat | caccctaatc | aagttttttg | gggtcgaggt | gccgtaaagc | 1920 |
| 1861 | accgggtgat | gcacttggta | gtgggattag | ttcaaaaaac | cccagctcca | cggcatttcg | 1920 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | actaaatcgg | aaccctaaag | ggagcccccg | atttagagct | tgacggggaa | agccggcgaa | 1980 |
| 1921 | tgatttagcc | ttgggatttc | cctcgggggc | taaatctcga | actgcccctt | tcggccgctt | 1980 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | cgtggcgaga | aaggaaggga | agaaagcgaa | aggagcgggc | gctagggcgc | tggcaagtgt | 2040 |
| 1981 | gcaccgctct | ttccttccct | tctttcgctt | tcctcgcccg | cgatcccgcg | accgttcaca | 2040 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | agcggtcacg | ctgcgcgtaa | ccaccacacc | cgccgcgctt | aatgcgccgc | tacagggcgc | 2100 |
| 2041 | tcgccagtgc | gacgcgcatt | ggtggtgtgg | gcggcgcgaa | ttacgcggcg | atgtcccgcg | 2100 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | gtcaggtggc | acttttcggg | gaaatgtgcg | cggaacccct | atttgtttat | ttttctaaat | 2160 |
| 2101 | cagtccaccg | tgaaaagccc | ctttacacgc | gccttgggga | taaacaaata | aaaagattta | 2160 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | acattcaaat | atgtatccgc | tcatgagaca | ataaccctga | taaatgcttc | aataatattg | 2220 |
| 2161 | tgtaagttta | tacataggcg | agtactctgt | tattgggact | atttacgaag | ttattataac | 2220 |
| .......... | AmpR_pro | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | aaaaaggaag | agtcctgagg | cggaaagaac | cagctgtgga | atgtgtgtca | gttagggtgt | 2280 |
| 2221 | tttttccttc | tcaggactcc | gcctttcttg | gtcgacacct | tacacacagt | caatcccaca | 2280 |
| .......... | .......... | .......... | ......... | pBABE_3_pri | SV40_enh |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | ggaaagtccc | caggctcccc | agcaggcaga | agtatgcaaa | gcatgcatct | caattagtca | 2340 |
| 2281 | cctttcaggg | gtccgagggg | tcgtccgtct | tcatacgttt | cgtacgtaga | gttaatcagt | 2340 |
| .......... | ...... | SV40_enh SV40_pro | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | gcaaccaggt | gtggaaagtc | cccaggctcc | ccagcaggca | gaagtatgca | aagcatgcat | 2400 |
| 2341 | cgttggtcca | cacctttcag | gggtccgagg | ggtcgtccgt | cttcatacgt | ttcgtacgta | 2400 |
| .......... | ...... | SV40_enh SV40_pro | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | ctcaattagt | cagcaaccat | agtcccgccc | ctaactccgc | ccatcccgcc | cctaactccg | 2460 |
| 2401 | gagttaatca | gtcgttggta | tcagggcggg | gattgaggcg | ggtagggcgg | ggattgaggc | 2460 |
| .......... | ...... | SV40_enh SV40_pro | ...... | ......... | SV40_origin |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | cccagttccg | cccattctcc | gccccatggc | tgactaattt | tttttattta | tgcagaggcc | 2520 |
| 2461 | gggtcaaggc | gggtaagagg | cggggtaccg | actgattaaa | aaaaataaat | acgtctccgg | 2520 |
| SV40_enh | ..... | SV40_pro SV40_origin | ..... | ........ | SV40pro_F_pri |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2521 | gaggccgcct | cggcctctga | gctattccag | aagtagtgag | gaggcttttt | tggaggccta | 2580 |
| 2521 | ctccggcgga | gccggagact | cgataaggtc | ttcatcactc | ctccgaaaaa | acctccggat | 2580 |
| .......... | SV40_pro | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | ggcttttgca | aagatcgatc | aagagacagg | atgaggatcg | tttcgcatga | ttgaacaaga | 2640 |
| 2581 | ccgaaaacgt | ttctagctag | ttctctgtcc | tactcctagc | aaagcgtact | aacttgttct | 2640 |
| .......... | .......... | .......... | .......... | ........ | ORF 2 Neomycin |
| .......... | .......... | EagI(2661) | .......... | .......... | .......... |
| 2641 | tggattgcac | gcaggttctc | cggccgcttg | ggtggagagg | ctattcggct | atgactgggc | 2700 |
| 2641 | acctaacgtg | cgtccaagag | gccggcgaac | ccacctctcc | gataagccga | tactgacccg | 2700 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | acaacagaca | atcggctgct | ctgatgccgc | cgtgttccgg | ctgtcagcgc | aggggcgccc | 2760 |
| 2701 | tgttgtctgt | tagccgacga | gactacggcg | gcacaaggcc | gacagtcgcg | tccccgcggg | 2760 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2761 | ggttcttttt | gtcaagaccg | acctgtccgg | tgccctgaat | gaactgcaag | acgaggcagc | 2820 |
| 2761 | ccaagaaaaa | cagttctggc | tggacaggcc | acgggactta | cttgacgttc | tgctccgtcg | 2820 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | MscI(2837) | .......... | FspI(2857) | .......... | .......... |
| 2821 | gcggctatcg | tggctggcca | cgacgggcgt | tccttgcgca | gctgtgctcg | acgttgtcac | 2880 |
| 2821 | cgccgatagc | accgaccggt | gctgcccgca | aggaacgcgt | cgacacgagc | tgcaacagtg | 2880 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2881 | tgaagcggga | agggactggc | tgctattggg | cgaagtgccg | gggcaggatc | tcctgtcatc | 2940 |
| 2881 | acttcgccct | tccctgaccg | acgataaccc | gcttcacggc | cccgtcctag | aggacagtag | 2940 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2941 | tcaccttgct | cctgccgaga | aagtatccat | catggctgat | gcaatgcggc | ggctgcatac | 3000 |
| 2941 | agtggaacga | ggacggctct | ttcataggta | gtaccgacta | cgttacgccg | ccgacgtatg | 3000 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | gcttgatccg | gctacctgcc | cattcgacca | ccaagcgaaa | catcgcatcg | agcgagcacg | 3060 |
| 3001 | cgaactaggc | cgatggacgg | gtaagctggt | ggttcgcttt | gtagcgtagc | tcgctcgtgc | 3060 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | tactcggatg | gaagccggtc | ttgtcgatca | ggatgatctg | gacgaagagc | atcaggggct | 3120 |
| 3061 | atgagcctac | cttcggccag | aacagctagt | cctactagac | ctgcttctcg | tagtccccga | 3120 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | cgcgccagcc | gaactgttcg | ccaggctcaa | ggcgagcatg | cccgacggcg | aggatctcgt | 3180 |
| 3121 | gcgcggtcgg | cttgacaagc | ggtccgagtt | ccgctcgtac | gggctgccgc | tcctagagca | 3180 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | cgtgacccat | ggcgatgcct | gcttgccgaa | tatcatggtg | gaaaatggcc | gcttttctgg | 3240 |
| 3181 | gcactgggta | ccgctacgga | cgaacggctt | atagtaccac | cttttaccgg | cgaaaagacc | 3240 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | attcatcgac | tgtggccggc | tgggtgtggc | ggaccgctat | caggacatag | cgttggctac | 3300 |
| 3241 | taagtagctg | acaccggccg | acccacaccg | cctggcgata | gtcctgtatc | gcaaccgatg | 3300 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | ccgtgatatt | gctgaagagc | ttggcggcga | atgggctgac | cgcttcctcg | tgctttacgg | 3360 |
| 3301 | ggcactataa | cgacttctcg | aaccgccgct | tacccgactg | gcgaaggagc | acgaaatgcc | 3360 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | tatcgccgct | cccgattcgc | agcgcatcgc | cttctatcgc | cttcttgacg | agttcttctg | 3420 |
| 3361 | atagcggcga | gggctaagcg | tcgcgtagcg | gaagatagcg | gaagaactgc | tcaagaagac | 3420 |
| .......... | ........ | ORF 2 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | agcgggactc | tggggttcga | aatgaccgac | caagcgacgc | ccaacctgcc | atcacgagat | 3480 |
| 3421 | tcgccctgag | accccaagct | ttactggctg | gttcgctgcg | ggttggacgg | tagtgctcta | 3480 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | ttcgattcca | ccgccgcctt | ctatgaaagg | ttgggcttcg | gaatcgtttt | ccgggacgcc | 3540 |
| 3481 | aagctaaggt | ggcggcggaa | gatactttcc | aacccgaagc | cttagcaaaa | ggccctgcgg | 3540 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | ggctggatga | tcctccagcg | cggggatctc | atgctggagt | tcttcgccca | ccctaggggg | 3600 |
| 3541 | ccgacctact | aggaggtcgc | gcccctagag | tacgacctca | agaagcgggt | gggatccccc | 3600 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | aggctaactg | aaacacggaa | ggagacaata | ccggaaggaa | cccgcgctat | gacggcaata | 3660 |
| 3601 | tccgattgac | tttgtgcctt | cctctgttat | ggccttcctt | gggcgcgata | ctgccgttat | 3660 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | aaaagacaga | ataaaacgca | cggtgttggg | tcgtttgttc | ataaacgcgg | ggttcggtcc | 3720 |
| 3661 | ttttctgtct | tattttgcgt | gccacaaccc | agcaaacaag | tatttgcgcc | ccaagccagg | 3720 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | cagggctggc | actctgtcga | taccccaccg | agaccccatt | ggggccaata | cgcccgcgtt | 3780 |
| 3721 | gtcccgaccg | tgagacagct | atggggtggc | tctggggtaa | ccccggttat | gcgggcgcaa | 3780 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | tcttcctttt | ccccacccca | ccccccaagt | tcgggtgaag | gcccagggct | cgcagccaac | 3840 |
| 3781 | agaaggaaaa | ggggtggggt | ggggggttca | agcccacttc | cgggtcccga | gcgtcggttg | 3840 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | gtcggggcgg | caggccctgc | catagcctca | ggttactcat | atatacttta | gattgattta | 3900 |
| 3841 | cagccccgcc | gtccgggacg | gtatcggagt | ccaatgagta | tatatgaaat | ctaactaaat | 3900 |
| .......... | TK_PA_term | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | aaacttcatt | tttaatttaa | aaggatctag | gtgaagatcc | tttttgataa | tctcatgacc | 3960 |
| 3901 | tttgaagtaa | aaattaaatt | ttcctagatc | cacttctagg | aaaaactatt | agagtactgg | 3960 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | aaaatccctt | aacgtgagtt | ttcgttccac | tgagcgtcag | accccgtaga | aaagatcaaa | 4020 |
| 3961 | ttttagggaa | ttgcactcaa | aagcaaggtg | actcgcagtc | tggggcatct | tttctagttt | 4020 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4021 | ggatcttctt | gagatccttt | ttttctgcgc | gtaatctgct | gcttgcaaac | aaaaaaacca | 4080 |
| 4021 | cctagaagaa | ctctaggaaa | aaaagacgcg | cattagacga | cgaacgtttg | tttttttggt | 4080 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | ccgctaccag | cggtggtttg | tttgccggat | caagagctac | caactctttt | tccgaaggta | 4140 |
| 4081 | ggcgatggtc | gccaccaaac | aaacggccta | gttctcgatg | gttgagaaaa | aggcttccat | 4140 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | actggcttca | gcagagcgca | gataccaaat | actgtccttc | tagtgtagcc | gtagttaggc | 4200 |
| 4141 | tgaccgaagt | cgtctcgcgt | ctatggttta | tgacaggaag | atcacatcgg | catcaatccg | 4200 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | caccacttca | agaactctgt | agcaccgcct | acatacctcg | ctctgctaat | cctgttacca | 4260 |
| 4201 | gtggtgaagt | tcttgagaca | tcgtggcgga | tgtatggagc | gagacgatta | ggacaatggt | 4260 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | gtggctgctg | ccagtggcga | taagtcgtgt | cttaccgggt | tggactcaag | acgatagtta | 4320 |
| 4261 | caccgacgac | ggtcaccgct | attcagcaca | gaatggccca | acctgagttc | tgctatcaat | 4320 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | ......... | ApaLI(4359) | ......... | .......... |
| 4321 | ccggataagg | cgcagcggtc | gggctgaacg | gggggttcgt | gcacacagcc | cagcttggag | 4380 |
| 4321 | ggcctattcc | gcgtcgccag | cccgacttgc | cccccaagca | cgtgtgtcgg | gtcgaacctc | 4380 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | cgaacgacct | acaccgaact | gagataccta | cagcgtgagc | tatgagaaag | cgccacgctt | 4440 |
| 4381 | gcttgctgga | tgtggcttga | ctctatggat | gtcgcactcg | atactctttc | gcggtgcgaa | 4440 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | cccgaaggga | gaaaggcgga | caggtatccg | gtaagcggca | gggtcggaac | aggagagcgc | 4500 |
| 4441 | gggcttccct | ctttccgcct | gtccataggc | cattcgccgt | cccagccttg | tcctctcgcg | 4500 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4501 | acgagggagc | ttccaggggg | aaacgcctgg | tatctttata | gtcctgtcgg | gtttcgccac | 4560 |
| 4501 | tgctccctcg | aaggtccccc | tttgcggacc | atagaaatat | caggacagcc | caaagcggtg | 4560 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4561 | ctctgacttg | agcgtcgatt | tttgtgatgc | tcgtcagggg | ggcggagcct | atggaaaaac | 4620 |
| 4561 | gagactgaac | tcgcagctaa | aaacactacg | agcagtcccc | ccgcctcgga | tacctttttg | 4620 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4621 | gccagcaacg | cggccttttt | acggttcctg | gccttttgct | ggccttttgc | tcacatgttc | 4680 |
| 4621 | cggtcgttgc | gccggaaaaa | tgccaaggac | cggaaaacga | ccggaaaacg | agtgtacaag | 4680 |
| pBR322_origin | ...... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4681 | tttcctgcgt | tatcccctga | ttctgtggat | aaccgtatta | ccgccatgca | t......... | 4731 |
| 4681 | aaaggacgca | ataggggact | aagacaccta | ttggcataat | ggcggtacgt | a......... | 4731 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
|
|
|