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  • BVTech Plasmid

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    Sequence of pECFP-C1

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    Sequence of pECFP-C1 : 4731 BP; 1138 A; 1286 C; 1244 G; 1063 T; 0 other;

    AseI(7)..................................................
    1tagttattaatagtaatcaattacggggtcattagttcatagcccatatatggagttccg60
    1atcaataattatcattagttaatgccccagtaatcaagtatcgggtatatacctcaaggc60
    ........................... CMV_immearly_pro.................
    ............................................................
    61cgttacataacttacggtaaatggcccgcctggctgaccgcccaacgacc< font color="#000000" style="font-size:10px" face="Courier">cccgcccatt120
    61gcaatgtattgaatgccatttaccgggcggaccgactggcgggttgctgggggcgggtaa120
    ................. CMV_immearly_pro CAG_enh.................
    ............................................................
    121gacgtcaataatgacgtatgttcccatagtaacgccaatagggactttcc attgacgtca180
    121ctgcagttattactgcatacaagggtatcattgcggttatccctgaaaggtaactgcagt180
    ............. CAG_enh CMV_immearly_pro.......................
    .................................................. NdeI(234)
    181atgggtggagtatttacggtaaactgcccacttggcagtacatcaagtgt atcatatgcc240
    181tacccacctcataaatgccatttgacgggtgaaccgtcatgtagttcacatagtatacgg240
    ............. CAG_enh CMV_immearly_pro.......................
    ............................................................
    241aagtacgccccctattgacgtcaatgacggtaaatggcccgcctggcatt atgcccagta300
    241ttcatgcgggggataactgcagttactgccatttaccgggcggaccgtaatacgggtcat300
    ............. CAG_enh CMV_immearly_pro.......................
    ............................................................
    301catgaccttatgggactttcctacttggcagtacatctacgtattagtca tcgctattac360
    301gtactggaataccctgaaaggatgaaccgtcatgtagatgcataatcagtagcgataatg360
    ............. CAG_enh CMV_immearly_pro.......................
    ............................................................
    361catggtgatgcggttttggcagtacatcaatgggcgtggatagcggtttgactcacgggg420
    361gtaccactacgccaaaaccgtcatgtagttacccgcacctatcgccaaactgagtgcccc420
    ................. CMV_immearly_pro...........................
    ............................................................
    421atttccaagtctccaccccattgacgtcaatgggagtttgttttggcaccaaaatcaacg480
    421taaaggttcagaggtggggtaactgcagttaccctcaaacaaaaccgtggttttagttgc480
    ................. CMV_immearly_pro...........................
    ............................................................
    481ggactttccaaaatgtcgtaacaactccgccccattgacgcaaatgggcggtaggcgtgt540
    481cctgaaaggttttacagcattgttgaggcggggtaactgcgtttacccgccatccgcaca540
    ................. CMV_immearly_pro.. CMV_fwd_pri CMV_pro.....
    ............................................. NheI(591) AgeI(600)
    541acggtgggaggtctatataagcagagctggtttagtgaaccgtcagatccgctagcgcta600
    541tgccaccctccagatatattcgtctcgaccaaatcacttggcagtctaggcgatcgcgat600
    ....... CMV_immearly_pro CMV_pro...........................
    ............................................................
    601ccggtcgccaccatggtgagcaagggcgaggagctgttcaccggggtggtgcccatcctg660
    601ggccagcggtggtaccactcgttcccgctcctcgacaagtggccccaccacgggtaggac660
    .................... ORF 1 ECFP ORF 1....................
    ............................................................
    661gtcgagctggacggcgacgtaaacggccacaagttcagcgtgtccggcga gggcgagggc720
    661cagctcgacctgccgctgcatttgccggtgttcaagtcgcacaggccgctcccgctcccg720
    EGFP_N_pri....... ORF 1 ECFP ORF 1...........................
    ............................................................
    721gatgccacctacggcaagctgaccctgaagttcatctgcaccaccggcaa gctgcccgtg780
    721ctacggtggatgccgttcgactgggacttcaagtagacgtggtggccgttcgacgggcac780
    ................. ORF 1 ECFP ORF 1...........................
    ............................................................
    781ccctggcccaccctcgtgaccaccctgacctggggcgtgcagtgcttcag ccgctacccc840
    781gggaccgggtgggagcactggtgggactggaccccgcacgtcacgaagtcggcgatgggg840
    ................. ORF 1 ECFP ORF 1...........................
    ............................................................
    841gaccacatgaagcagcacgacttcttcaagtccgccatgcccgaaggcta cgtccaggag900
    841ctggtgtacttcgtcgtgctgaagaagttcaggcggtacgggcttccgatgcaggtcctc900
    ................. ORF 1 ECFP ORF 1...........................
    ............................................................
    901cgcaccatcttcttcaaggacgacggcaactacaagacccgcgccgaggt gaagttcgag960
    901gcgtggtagaagaagttcctgctgccgttgatgttctgggcgcggctccacttcaagctc960
    ................. ORF 1 ECFP ORF 1...........................
    ............................................................
    961ggcgacaccctggtgaaccgcatcgagctgaagggcatcgacttcaagga ggacggcaac1020
    961ccgctgtgggaccacttggcgtagctcgacttcccgtagctgaagttcctcctgccgttg1020
    ................. ORF 1 ECFP ORF 1...........................
    ............................................................
    1021atcctggggcacaagctggagtacaactacatcagccacaacgtctatatcaccgccgac1080
    1021taggaccccgtgttcgacctcatgttgatgtagtcggtgttgcagatatagtggcggctg1080
    ................. ORF 1 ECFP ORF 1...........................
    ............................................................
    1081aagcagaagaacggcatcaaggccaacttcaagatccgccacaacatcgaggacggcagc1140
    1081ttcgtcttcttgccgtagttccggttgaagttctaggcggtgttgtagctcctgccgtcg1140
    ................. ORF 1 ECFP ORF 1...........................
    ............................................................
    1141gtgcagctcgccgaccactaccagcagaacacccccatcggcgacggccccgtgctgctg1200
    1141cacgtcgagcggctggtgatggtcgtcttgtgggggtagccgctgccggggcacgacgac1200
    ................. ORF 1 ECFP ORF 1...........................
    ............................................................
    1201cccgacaaccactacctgagcacccagtccgccctgagcaaagaccccaacgagaagcgc1260
    1201gggctgttggtgatggactcgtgggtcaggcgggactcgtttctggggttgctcttcgcg1260
    ................. ORF 1 ECFP ORF 1...........................
    ............................................................
    1261gatcacatggtcctgctggagttcgtgaccgccgccgggatcactctcggcatggacgag1320
    1261ctagtgtaccaggacgacctcaagcactggcggcggccctagtgagagccgtacctgctc1320
    ....... EGFP_C_pri ORF 1 ECFP ORF 1...........................
    BglII,XhoI SacI,HindIII EcoRI PstI368),SalI(1369)
    1321ctgtacaagtccggactcagatctcgagctcaagcttcgaattctgcagtcgacggtacc1380
    1321gacatgttcaggcctgagtctagagctcgagttcgaagcttaagacgtcagctgccatgg1380
    ECFP......... ORF 1 ORF 1.............................
    SacII,ApaI,SmaI,BamHI(1390) XbaI(1402) BclI(1412)
    1381gcgggcccgggatccaccggatctagataactgatcataatcagccataccacatttgta1440
    1381cgcccgggccctaggtggcctagatctattgactagtattagtcggtatggtgtaaacat1440
    .......... ORF 1 ORF 1......... SV40_PA_term.........
    ............................................................
    1441gaggttttacttgctttaaaaaacctcccacacctccccctgaacctgaaacataaaatg1500
    1441ctccaaaatgaacgaaattttttggagggtgtggagggggacttggactttgtattttac1500
    ................... SV40_PA_term.............................
    ............................................................
    1501aatgcaattgttgttgttaacttgtttattgcagcttataatggttacaaataaagcaat1560
    1501ttacgttaacaacaacaattgaacaaataacgtcgaatattaccaatgtttatttcgtta1560
    ................... SV40_PA_term.............................
    ............................................................
    1561agcatcacaaatttcacaaataaagcatttttttcactgcattctagttgtggtttgtcc1620
    1561tcgtagtgtttaaagtgtttatttcgtaaaaaaagtgacgtaagatcaacaccaaacagg1620
    ................... SV40_PA_term.................. EBV_rev_pri
    ......... AflII(1637).......................................
    1621aaactcatcaatgtatcttaaggcgtaaattgtaagcgttaatattttgttaaaattcgc1680
    1621tttgagtagttacatagaattccgcatttaacattcgcaattataaaacaattttaagcg1680
    SV40_PA_term EBV_rev_pri....................................
    ............................................................
    1681gttaaatttttgttaaatcagctcattttttaaccaataggccgaaatcggcaaaatccc1740
    1681caatttaaaaacaatttagtcgagtaaaaaattggttatccggctttagccgttttaggg1740
    ............................................................
    ............................................................
    1741ttataaatcaaaagaatagaccgagatagggttgagtgttgttccagtttggaacaagag1800
    1741aatatttagttttcttatctggctctatcccaactcacaacaaggtcaaaccttgttctc1800
    ........................................ f1_origin..........
    ............................................................
    1801tccactattaaagaacgtggactccaacgtcaaagggcgaaaaaccgtctatcagggcga1860
    1801aggtgataatttcttgcacctgaggttgcagtttcccgctttttggcagatagtcccgct1860
    .................... f1_origin..............................
    ............................................................
    1861tggcccactacgtgaaccatcaccctaatcaagttttttggggtcgaggtgccgtaaagc1920
    1861accgggtgatgcacttggtagtgggattagttcaaaaaaccccagctccacggcatttcg1920
    .................... f1_origin..............................
    ............................................................
    1921actaaatcggaaccctaaagggagcccccgatttagagcttgacggggaaagccggcgaa1980
    1921tgatttagccttgggatttccctcgggggctaaatctcgaactgcccctttcggccgctt1980
    .................... f1_origin..............................
    ............................................................
    1981cgtggcgagaaaggaagggaagaaagcgaaaggagcgggcgctagggcgctggcaagtgt2040
    1981gcaccgctctttccttcccttctttcgctttcctcgcccgcgatcccgcgaccgttcaca2040
    .................... f1_origin..............................
    ............................................................
    2041agcggtcacgctgcgcgtaaccaccacacccgccgcgcttaatgcgccgctacagggcgc2100
    2041tcgccagtgcgacgcgcattggtggtgtgggcggcgcgaattacgcggcgatgtcccgcg2100
    .................... f1_origin..............................
    ............................................................
    2101gtcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaat2160
    2101cagtccaccgtgaaaagcccctttacacgcgccttggggataaacaaataaaaagattta2160
    ............................................................
    ............................................................
    2161acattcaaatatgtatccgctcatgagacaataaccctgataaatgcttcaataatattg2220
    2161tgtaagtttatacataggcgagtactctgttattgggactatttacgaagttattataac2220
    .......... AmpR_pro........................................
    ............................................................
    2221aaaaaggaagagtcctgaggcggaaagaaccagctgtggaatgtgtgtcagttagggtgt2280
    2221tttttccttctcaggactccgcctttcttggtcgacaccttacacacagtcaatcccaca2280
    ....................................... pBABE_3_pri SV40_enh
    ............................................................
    2281ggaaagtccccaggctccccagcaggcagaagtatgcaaagcatgcatctcaattagtca2340
    2281cctttcaggggtccgaggggtcgtccgtcttcatacgtttcgtacgtagagttaatcagt2340
    ................ SV40_enh SV40_pro..........................
    ............................................................
    2341gcaaccaggtgtggaaagtccccaggctccccagcaggcagaagtatgcaaagcatgcat2400
    2341cgttggtccacacctttcaggggtccgaggggtcgtccgtcttcatacgtttcgtacgta2400
    ................ SV40_enh SV40_pro..........................
    ............................................................
    2401ctcaattagtcagcaaccatagtcccgcccctaactccgcccatcccgcccctaactccg2460
    2401gagttaatcagtcgttggtatcagggcggggattgaggcgggtagggcggggattgaggc2460
    ................ SV40_enh SV40_pro............... SV40_origin
    ............................................................
    2461cccagttccgcccattctccgccccatggctgactaattttttttatttatgcagaggcc2520
    2461gggtcaaggcgggtaagaggcggggtaccgactgattaaaaaaaataaatacgtctccgg2520
    SV40_enh..... SV40_pro SV40_origin............. SV40pro_F_pri
    ............................................................
    2521gaggccgcctcggcctctgagctattccagaagtagtgaggaggcttttttggaggccta2580
    2521ctccggcggagccggagactcgataaggtcttcatcactcctccgaaaaaacctccggat2580
    .......... SV40_pro........................................
    ............................................................
    2581ggcttttgcaaagatcgatcaagagacaggatgaggatcgtttcgcatgattgaacaaga2640
    2581ccgaaaacgtttctagctagttctctgtcctactcctagcaaagcgtactaacttgttct2640
    ................................................ ORF 2 Neomycin
    .................... EagI(2661)..............................
    2641tggattgcacgcaggttctccggccgcttgggtggagaggctattcggctatgactgggc2700
    2641acctaacgtgcgtccaagaggccggcgaacccacctctccgataagccgatactgacccg2700
    .................. ORF 2 Neomycin............................
    ............................................................
    2701acaacagacaatcggctgctctgatgccgccgtgttccggctgtcagcgcaggggcgccc2760
    2701tgttgtctgttagccgacgagactacggcggcacaaggccgacagtcgcgtccccgcggg2760
    .................. ORF 2 Neomycin............................
    ............................................................
    2761ggttctttttgtcaagaccgacctgtccggtgccctgaatgaactgcaagacgaggcagc2820
    2761ccaagaaaaacagttctggctggacaggccacgggacttacttgacgttctgctccgtcg2820
    .................. ORF 2 Neomycin............................
    .......... MscI(2837).......... FspI(2857)....................
    2821gcggctatcgtggctggccacgacgggcgttccttgcgcagctgtgctcgacgttgtcac2880
    2821cgccgatagcaccgaccggtgctgcccgcaaggaacgcgtcgacacgagctgcaacagtg2880
    .................. ORF 2 Neomycin............................
    ............................................................
    2881tgaagcgggaagggactggctgctattgggcgaagtgccggggcaggatctcctgtcatc2940
    2881acttcgcccttccctgaccgacgataacccgcttcacggccccgtcctagaggacagtag2940
    .................. ORF 2 Neomycin............................
    ............................................................
    2941tcaccttgctcctgccgagaaagtatccatcatggctgatgcaatgcggcggctgcatac3000
    2941agtggaacgaggacggctctttcataggtagtaccgactacgttacgccgccgacgtatg3000
    .................. ORF 2 Neomycin............................
    ............................................................
    3001gcttgatccggctacctgcccattcgaccaccaagcgaaacatcgcatcgagcgagcacg3060
    3001cgaactaggccgatggacgggtaagctggtggttcgctttgtagcgtagctcgctcgtgc3060
    .................. ORF 2 Neomycin............................
    ............................................................
    3061tactcggatggaagccggtcttgtcgatcaggatgatctggacgaagagcatcaggggct3120
    3061atgagcctaccttcggccagaacagctagtcctactagacctgcttctcgtagtccccga3120
    .................. ORF 2 Neomycin............................
    ............................................................
    3121cgcgccagccgaactgttcgccaggctcaaggcgagcatgcccgacggcgaggatctcgt3180
    3121gcgcggtcggcttgacaagcggtccgagttccgctcgtacgggctgccgctcctagagca3180
    .................. ORF 2 Neomycin............................
    ............................................................
    3181cgtgacccatggcgatgcctgcttgccgaatatcatggtggaaaatggccgcttttctgg3240
    3181gcactgggtaccgctacggacgaacggcttatagtaccaccttttaccggcgaaaagacc3240
    .................. ORF 2 Neomycin............................
    ............................................................
    3241attcatcgactgtggccggctgggtgtggcggaccgctatcaggacatagcgttggctac3300
    3241taagtagctgacaccggccgacccacaccgcctggcgatagtcctgtatcgcaaccgatg3300
    .................. ORF 2 Neomycin............................
    ............................................................
    3301ccgtgatattgctgaagagcttggcggcgaatgggctgaccgcttcctcgtgctttacgg3360
    3301ggcactataacgacttctcgaaccgccgcttacccgactggcgaaggagcacgaaatgcc3360
    .................. ORF 2 Neomycin............................
    ............................................................
    3361tatcgccgctcccgattcgcagcgcatcgccttctatcgccttcttgacgagttcttctg3420
    3361atagcggcgagggctaagcgtcgcgtagcggaagatagcggaagaactgctcaagaagac3420
    .................. ORF 2 Neomycin............................
    ............................................................
    3421agcgggactctggggttcgaaatgaccgaccaagcgacgcccaacctgccatcacgagat3480
    3421tcgccctgagaccccaagctttactggctggttcgctgcgggttggacggtagtgctcta3480
    ............................................................
    ............................................................
    3481ttcgattccaccgccgccttctatgaaaggttgggcttcggaatcgttttccgggacgcc3540
    3481aagctaaggtggcggcggaagatactttccaacccgaagccttagcaaaaggccctgcgg3540
    ............................................................
    ............................................................
    3541ggctggatgatcctccagcgcggggatctcatgctggagttcttcgcccaccctaggggg3600
    3541ccgacctactaggaggtcgcgcccctagagtacgacctcaagaagcgggtgggatccccc3600
    ............................................................
    ............................................................
    3601aggctaactgaaacacggaaggagacaataccggaaggaacccgcgctatgacggcaata3660
    3601tccgattgactttgtgccttcctctgttatggccttccttgggcgcgatactgccgttat3660
    .................... TK_PA_term..............................
    ............................................................
    3661aaaagacagaataaaacgcacggtgttgggtcgtttgttcataaacgcggggttcggtcc3720
    3661ttttctgtcttattttgcgtgccacaacccagcaaacaagtatttgcgccccaagccagg3720
    .................... TK_PA_term..............................
    ............................................................
    3721cagggctggcactctgtcgataccccaccgagaccccattggggccaatacgcccgcgtt3780
    3721gtcccgaccgtgagacagctatggggtggctctggggtaaccccggttatgcgggcgcaa3780
    .................... TK_PA_term..............................
    ............................................................
    3781tcttccttttccccaccccaccccccaagttcgggtgaaggcccagggctcgcagccaac3840
    3781agaaggaaaaggggtggggtggggggttcaagcccacttccgggtcccgagcgtcggttg3840
    .................... TK_PA_term..............................
    ............................................................
    3841gtcggggcggcaggccctgccatagcctcaggttactcatatatactttagattgattta3900
    3841cagccccgccgtccgggacggtatcggagtccaatgagtatatatgaaatctaactaaat3900
    .......... TK_PA_term........................................
    ............................................................
    3901aaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataatctcatgacc3960
    3901tttgaagtaaaaattaaattttcctagatccacttctaggaaaaactattagagtactgg3960
    ............................................................
    ............................................................
    3961aaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaa4020
    3961ttttagggaattgcactcaaaagcaaggtgactcgcagtctggggcatcttttctagttt4020
    ............................................................
    ............................................................
    4021ggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaacca4080
    4021cctagaagaactctaggaaaaaaagacgcgcattagacgacgaacgtttgtttttttggt4080
    .................. pBR322_origin............................
    ............................................................
    4081ccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggta4140
    4081ggcgatggtcgccaccaaacaaacggcctagttctcgatggttgagaaaaaggcttccat4140
    .................. pBR322_origin............................
    ............................................................
    4141actggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagttaggc4200
    4141tgaccgaagtcgtctcgcgtctatggtttatgacaggaagatcacatcggcatcaatccg4200
    .................. pBR322_origin............................
    ............................................................
    4201caccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttacca4260
    4201gtggtgaagttcttgagacatcgtggcggatgtatggagcgagacgattaggacaatggt4260
    .................. pBR322_origin............................
    ............................................................
    4261gtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagtta4320
    4261caccgacgacggtcaccgctattcagcacagaatggcccaacctgagttctgctatcaat4320
    .................. pBR322_origin............................
    ............................. ApaLI(4359)...................
    4321ccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcttggag4380
    4321ggcctattccgcgtcgccagcccgacttgccccccaagcacgtgtgtcgggtcgaacctc4380
    .................. pBR322_origin............................
    ............................................................
    4381cgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccacgctt4440
    4381gcttgctggatgtggcttgactctatggatgtcgcactcgatactctttcgcggtgcgaa4440
    .................. pBR322_origin............................
    ............................................................
    4441cccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgc4500
    4441gggcttccctctttccgcctgtccataggccattcgccgtcccagccttgtcctctcgcg4500
    .................. pBR322_origin............................
    ............................................................
    4501acgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggtttcgccac4560
    4501tgctccctcgaaggtccccctttgcggaccatagaaatatcaggacagcccaaagcggtg4560
    .................. pBR322_origin............................
    ............................................................
    4561ctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaac4620
    4561gagactgaactcgcagctaaaaacactacgagcagtccccccgcctcggatacctttttg4620
    .................. pBR322_origin............................
    ............................................................
    4621gccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgttc4680
    4621cggtcgttgcgccggaaaaatgccaaggaccggaaaacgaccggaaaacgagtgtacaag4680
    pBR322_origin..............................................
    ............................................................
    4681tttcctgcgttatcccctgattctgtggataaccgtattaccgccatgcat.........4731
    4681aaaggacgcaataggggactaagacacctattggcataatggcggtacgta.........4731
    ............................................................

    References



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