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  • BVTech Plasmid

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    Sequence of pHcRed1-N1_1

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    Sequence of pHcRed1-N1/1 : 4700 BP; 1116 A; 1277 C; 1255 G; 1052 T; 0 other;

    AseI(7)..................................................
    1tagttattaatagtaatcaattacggggtcattagttcatagcccatatatggagttccg60
    1atcaataattatcattagttaatgccccagtaatcaagtatcgggtatatacctcaaggc60
    ........................... CMV_immearly_pro.................
    ............................................................
    61cgttacataacttacggtaaatggcccgcctggctgaccgcccaacgacc< font color="#000000" style="font-size:10px" face="Courier">cccgcccatt120
    61gcaatgtattgaatgccatttaccgggcggaccgactggcgggttgctgggggcgggtaa120
    ................. CMV_immearly_pro CAG_enh.................
    ............................................................
    121gacgtcaataatgacgtatgttcccatagtaacgccaatagggactttcc attgacgtca180
    121ctgcagttattactgcatacaagggtatcattgcggttatccctgaaaggtaactgcagt180
    ............. CAG_enh CMV_immearly_pro.......................
    .................................................. NdeI(234)
    181atgggtggagtatttacggtaaactgcccacttggcagtacatcaagtgt atcatatgcc240
    181tacccacctcataaatgccatttgacgggtgaaccgtcatgtagttcacatagtatacgg240
    ............. CAG_enh CMV_immearly_pro.......................
    ............................................................
    241aagtacgccccctattgacgtcaatgacggtaaatggcccgcctggcatt atgcccagta300
    241ttcatgcgggggataactgcagttactgccatttaccgggcggaccgtaatacgggtcat300
    ............. CAG_enh CMV_immearly_pro.......................
    ............................................................
    301catgaccttatgggactttcctacttggcagtacatctacgtattagtca tcgctattac360
    301gtactggaataccctgaaaggatgaaccgtcatgtagatgcataatcagtagcgataatg360
    ............. CAG_enh CMV_immearly_pro.......................
    ............................................................
    361catggtgatgcggttttggcagtacatcaatgggcgtggatagcggtttgactcacgggg420
    361gtaccactacgccaaaaccgtcatgtagttacccgcacctatcgccaaactgagtgcccc420
    ................. CMV_immearly_pro...........................
    ............................................................
    421atttccaagtctccaccccattgacgtcaatgggagtttgttttggcaccaaaatcaacg480
    421taaaggttcagaggtggggtaactgcagttaccctcaaacaaaaccgtggttttagttgc480
    ................. CMV_immearly_pro...........................
    ............................................................
    481ggactttccaaaatgtcgtaacaactccgccccattgacgcaaatgggcggtaggcgtgt540
    481cctgaaaggttttacagcattgttgaggcggggtaactgcgtttacccgccatccgcaca540
    ................. CMV_immearly_pro.. CMV_fwd_pri CMV_pro.....
    ............................................................
    541acggtgggaggtctatataagcagagctggtttagtgaaccgtcagatccgctagcgcta600
    541tgccaccctccagatatattcgtctcgaccaaatcacttggcagtctaggcgatcgcgat600
    ....... CMV_immearly_pro CMV_pro...........................
    BglII,XhoI SacI,HindIII EcoRI PstI(638),SalI(639)
    601ccggactcagatctcgagctcaagcttcgaattctgcagtcgacggtaccgcgggcccgg660
    601ggcctgagtctagagctcgagttcgaagcttaagacgtcagctgccatggcgcccgggcc660
    ............................................................
    AgeI(666)..................................................
    661gatccaccggtcgccaccatggtgagcggcctgctgaaggagagtatgcgcatcaagatg720
    661ctaggtggccagcggtggtaccactcgccggacgacttcctctcatacgcgtagttctac720
    .............................. ORF 1....................
    ............................................................
    721tacatggagggcaccgtgaacggccactacttcaagtgcgagggcgagggcgacggcaac780
    721atgtacctcccgtggcacttgccggtgatgaagttcacgctcccgctcccgctgccgttg780
    .................... ORF 1..............................
    .............................. PmlI(813)....................
    781cccttcgccggcacccagagcatgagaatccacgtgaccgagggcgcccccctgcccttc840
    781gggaagcggccgtgggtctcgtactcttaggtgcactggctcccgcggggggacgggaag840
    .................... ORF 1..............................
    ............................................................
    841gccttcgacatcctggccccctgctgcgagtacggcagcaggaccttcgtgcaccacacc900
    841cggaagctgtaggaccgggggacgacgctcatgccgtcgtcctggaagcacgtggtgtgg900
    .................... ORF 1..............................
    ............................................................
    901gccgagatccccgacttcttcaagcagagcttccccgagggcttcacctgggagagaacc960
    901cggctctaggggctgaagaagttcgtctcgaaggggctcccgaagtggaccctctcttgg960
    .................... ORF 1..............................
    ............................................................
    961accacctacgaggacggcggcatcctgaccgcccaccaggacaccagcctggagggcaac1020
    961tggtggatgctcctgccgccgtaggactggcgggtggtcctgtggtcggacctcccgttg1020
    .................... ORF 1..............................
    ............................................................
    1021tgcctgatctacaaggtgaaggtgcacggcaccaacttccccgccgacggccccgtgatg1080
    1021acggactagatgttccacttccacgtgccgtggttgaaggggcggctgccggggcactac1080
    .................... ORF 1..............................
    ............................................................
    1081aagaacaagagcggcggctgggagcccagcaccgaggtggtgtaccccgagaacggcgtg1140
    1081ttcttgttctcgccgccgaccctcgggtcgtggctccaccacatggggctcttgccgcac1140
    .................... ORF 1..............................
    ............................................................
    1141ctgtgcggccggaacgtgatggccctgaaggtgggcgaccggcacctgatctgccaccac1200
    1141gacacgccggccttgcactaccgggacttccacccgctggccgtggactagacggtggtg1200
    .................... ORF 1..............................
    ............................................................
    1201tacaccagctaccggagcaagaaggccgtgcgcgccctgaccatgcccggcttccacttc1260
    1201atgtggtcgatggcctcgttcttccggcacgcgcgggactggtacgggccgaaggtgaag1260
    .................... ORF 1..............................
    ............................................................
    1261accgacatccggctccagatgctgcggaagaagaaggacgagtacttcgagctgtacgag1320
    1261tggctgtaggccgaggtctacgacgccttcttcttcctgctcatgaagctcgacatgctc1320
    .................... ORF 1..............................
    ........................................ NotI(1368)..........
    1321gccagcgtggcccggtacagcgacctgcccgagaaggccaactgaagcggccgcgactct1380
    1321cggtcgcaccgggccatgtcgctggacgggctcttccggttgacttcgccggcgctgaga1380
    .................... ORF 1..............................
    ............................................................
    1381agatcataatcagccataccacatttgtagaggttttacttgctttaaaaaacctcccac1440
    1381tctagtattagtcggtatggtgtaaacatctccaaaatgaacgaaattttttggagggtg1440
    ............................................................
    ........................................ HpaI(1487)..........
    1441acctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgtttattg1500
    1441tggagggggacttggactttgtattttacttacgttaacaacaacaattgaacaaataac1500
    ............................................................
    ............................................................
    1501cagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcatttt1560
    1501gtcgaatattaccaatgtttatttcgttatcgtagtgtttaaagtgtttatttcgtaaaa1560
    ............................................................
    ....................................... AflII(1606).........
    1561tttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttaaggcgtaaatt1620
    1561aaagtgacgtaagatcaacaccaaacaggtttgagtagttacatagaattccgcatttaa1620
    ................... EBV_rev_pri.............................
    ............................................................
    1621gtaagcgttaatattttgttaaaattcgcgttaaatttttgttaaatcagctcatttttt1680
    1621cattcgcaattataaaacaattttaagcgcaatttaaaaacaatttagtcgagtaaaaaa1680
    ............................................................
    ............................................................
    1681aaccaataggccgaaatcggcaaaatcccttataaatcaaaagaatagaccgagataggg1740
    1681ttggttatccggctttagccgttttagggaatatttagttttcttatctggctctatccc1740
    ............................................................
    ............................................................
    1741ttgagtgttgttccagtttggaacaagagtccactattaaagaacgtggactccaacgtc1800
    1741aactcacaacaaggtcaaaccttgttctcaggtgataatttcttgcacctgaggttgcag1800
    .............................. f1_origin....................
    ............................................................
    1801aaagggcgaaaaaccgtctatcagggcgatggcccactacgtgaaccatcaccctaatca1860
    1801tttcccgctttttggcagatagtcccgctaccgggtgatgcacttggtagtgggattagt1860
    .................... f1_origin..............................
    ............................................................
    1861agttttttggggtcgaggtgccgtaaagcactaaatcggaaccctaaagggagcccccga1920
    1861tcaaaaaaccccagctccacggcatttcgtgatttagccttgggatttccctcgggggct1920
    .................... f1_origin..............................
    ............................................................
    1921tttagagcttgacggggaaagccggcgaacgtggcgagaaaggaagggaagaaagcgaaa1980
    1921aaatctcgaactgcccctttcggccgcttgcaccgctctttccttcccttctttcgcttt1980
    .................... f1_origin..............................
    ............................................................
    1981ggagcgggcgctagggcgctggcaagtgtagcggtcacgctgcgcgtaaccaccacaccc2040
    1981cctcgcccgcgatcccgcgaccgttcacatcgccagtgcgacgcgcattggtggtgtggg2040
    .................... f1_origin..............................
    ............................................................
    2041gccgcgcttaatgcgccgctacagggcgcgtcaggtggcacttttcggggaaatgtgcgc2100
    2041cggcgcgaattacgcggcgatgtcccgcgcagtccaccgtgaaaagcccctttacacgcg2100
    f1_origin..................................................
    ............................................................
    2101ggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaa2160
    2101ccttggggataaacaaataaaaagatttatgtaagtttatacataggcgagtactctgtt2160
    ........................................ AmpR_pro..........
    ............................................................
    2161taaccctgataaatgcttcaataatattgaaaaaggaagagtcctgaggcggaaagaacc2220
    2161attgggactatttacgaagttattataactttttccttctcaggactccgcctttcttgg2220
    ............................................................
    ............................................................
    2221agctgtggaatgtgtgtcagttagggtgtggaaagtccccaggctccccagcaggcagaa2280
    2221tcgacaccttacacacagtcaatcccacacctttcaggggtccgaggggtcgtccgtctt2280
    ......... pBABE_3_pri......... SV40_enh SV40_pro..........
    ............................................................
    2281gtatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctccc2340
    2281catacgtttcgtacgtagagttaatcagtcgttggtccacacctttcaggggtccgaggg2340
    ................ SV40_enh SV40_pro..........................
    ............................................................
    2341cagcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccc2400
    2341gtcgtccgtcttcatacgtttcgtacgtagagttaatcagtcgttggtatcagggcgggg2400
    ................ SV40_enh SV40_pro..........................
    ............................................................
    2401taactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggct2460
    2401attgaggcgggtagggcggggattgaggcgggtcaaggcgggtaagaggcggggtaccga2460
    ............... SV40_enh SV40_pro SV40_origin...............
    ............................................................
    2461gactaattttttttatttatgcagaggccgaggccgcctcggcctctgagctattccaga2520
    2461ctgattaaaaaaaataaatacgtctccggctccggcggagccggagactcgataaggtct2520
    ... SV40_origin SV40_pro SV40pro_F_pri.......................
    .................... StuI(2545).......... ClaI(2564)..........
    2521agtagtgaggaggcttttttggaggcctaggcttttgcaaagatcgatcaagagacagga2580
    2521tcatcactcctccgaaaaaacctccggatccgaaaacgtttctagctagttctctgtcct2580
    ............................................................
    ............................................................
    2581tgaggatcgtttcgcatgattgaacaagatggattgcacgcaggttctccggccgcttgg2640
    2581actcctagcaaagcgtactaacttgttctacctaacgtgcgtccaagaggccggcgaacc2640
    ............................ ORF 1 Neomycin..................
    ............................................................
    2641gtggagaggctattcggctatgactgggcacaacagacaatcggctgctctgatgccgcc2700
    2641cacctctccgataagccgatactgacccgtgttgtctgttagccgacgagactacggcgg2700
    .................. ORF 1 Neomycin............................
    ............................................................
    2701gtgttccggctgtcagcgcaggggcgcccggttctttttgtcaagaccgacctgtccggt2760
    2701cacaaggccgacagtcgcgtccccgcgggccaagaaaaacagttctggctggacaggcca2760
    .................. ORF 1 Neomycin............................
    ........................................ MscI(2806)..........
    2761gccctgaatgaactgcaagacgaggcagcgcggctatcgtggctggccacgacgggcgtt2820
    2761cgggacttacttgacgttctgctccgtcgcgccgatagcaccgaccggtgctgcccgcaa2820
    .................. ORF 1 Neomycin............................
    ............................................................
    2821ccttgcgcagctgtgctcgacgttgtcactgaagcgggaagggactggctgctattgggc2880
    2821ggaacgcgtcgacacgagctgcaacagtgacttcgcccttccctgaccgacgataacccg2880
    .................. ORF 1 Neomycin............................
    ............................................................
    2881gaagtgccggggcaggatctcctgtcatctcaccttgctcctgccgagaaagtatccatc2940
    2881cttcacggccccgtcctagaggacagtagagtggaacgaggacggctctttcataggtag2940
    .................. ORF 1 Neomycin............................
    ............................................................
    2941atggctgatgcaatgcggcggctgcatacgcttgatccggctacctgcccattcgaccac3000
    2941taccgactacgttacgccgccgacgtatgcgaactaggccgatggacgggtaagctggtg3000
    .................. ORF 1 Neomycin............................
    ............................................................
    3001caagcgaaacatcgcatcgagcgagcacgtactcggatggaagccggtcttgtcgatcag3060
    3001gttcgctttgtagcgtagctcgctcgtgcatgagcctaccttcggccagaacagctagtc3060
    .................. ORF 1 Neomycin............................
    ............................................................
    3061gatgatctggacgaagagcatcaggggctcgcgccagccgaactgttcgccaggctcaag3120
    3061ctactagacctgcttctcgtagtccccgagcgcggtcggcttgacaagcggtccgagttc3120
    .................. ORF 1 Neomycin............................
    ............................................................
    3121gcgagcatgcccgacggcgaggatctcgtcgtgacccatggcgatgcctgcttgccgaat3180
    3121cgctcgtacgggctgccgctcctagagcagcactgggtaccgctacggacgaacggctta3180
    .................. ORF 1 Neomycin............................
    ............................................................
    3181atcatggtggaaaatggccgcttttctggattcatcgactgtggccggctgggtgtggcg3240
    3181tagtaccaccttttaccggcgaaaagacctaagtagctgacaccggccgacccacaccgc3240
    .................. ORF 1 Neomycin............................
    ............................................................
    3241gaccgctatcaggacatagcgttggctacccgtgatattgctgaagagcttggcggcgaa3300
    3241ctggcgatagtcctgtatcgcaaccgatgggcactataacgacttctcgaaccgccgctt3300
    .................. ORF 1 Neomycin............................
    ............................................................
    3301tgggctgaccgcttcctcgtgctttacggtatcgccgctcccgattcgcagcgcatcgcc3360
    3301acccgactggcgaaggagcacgaaatgccatagcggcgagggctaagcgtcgcgtagcgg3360
    .................. ORF 1 Neomycin............................
    ............................................................
    3361ttctatcgccttcttgacgagttcttctgagcgggactctggggttcgaaatgaccgacc3420
    3361aagatagcggaagaactgctcaagaagactcgccctgagaccccaagctttactggctgg3420
    ........ ORF 1 Neomycin......................................
    ............................................................
    3421aagcgacgcccaacctgccatcacgagatttcgattccaccgccgccttctatgaaaggt3480
    3421ttcgctgcgggttggacggtagtgctctaaagctaaggtggcggcggaagatactttcca3480
    ............................................................
    ............................................................
    3481tgggcttcggaatcgttttccgggacgccggctggatgatcctccagcgcggggatctca3540
    3481acccgaagccttagcaaaaggccctgcggccgacctactaggaggtcgcgcccctagagt3540
    ............................................................
    ............................................................
    3541tgctggagttcttcgcccaccctagggggaggctaactgaaacacggaaggagacaatac3600
    3541acgacctcaagaagcgggtgggatccccctccgattgactttgtgccttcctctgttatg3600
    ........................................ TK_PA_term..........
    ............................................................
    3601cggaaggaacccgcgctatgacggcaataaaaagacagaataaaacgcacggtgttgggt3660
    3601gccttccttgggcgcgatactgccgttatttttctgtcttattttgcgtgccacaaccca3660
    .................... TK_PA_term..............................
    ............................................................
    3661cgtttgttcataaacgcggggttcggtcccagggctggcactctgtcgataccccaccga3720
    3661gcaaacaagtatttgcgccccaagccagggtcccgaccgtgagacagctatggggtggct3720
    .................... TK_PA_term..............................
    ............................................................
    3721gaccccattggggccaatacgcccgcgtttcttccttttccccaccccaccccccaagtt3780
    3721ctggggtaaccccggttatgcgggcgcaaagaaggaaaaggggtggggtggggggttcaa3780
    .................... TK_PA_term..............................
    ............................................................
    3781cgggtgaaggcccagggctcgcagccaacgtcggggcggcaggccctgccatagcctcag3840
    3781gcccacttccgggtcccgagcgtcggttgcagccccgccgtccgggacggtatcggagtc3840
    .................... TK_PA_term..............................
    ............................................................
    3841gttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctagg3900
    3841caatgagtatatatgaaatctaactaaattttgaagtaaaaattaaattttcctagatcc3900
    ............................................................
    ............................................................
    3901tgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccact3960
    3901acttctaggaaaaactattagagtactggttttagggaattgcactcaaaagcaaggtga3960
    ............................................................
    ............................................................
    3961gagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcg4020
    3961ctcgcagtctggggcatcttttctagtttcctagaagaactctaggaaaaaaagacgcgc4020
    ...................................... pBR322_origin........
    ............................................................
    4021taatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatc4080
    4021attagacgacgaacgtttgtttttttggtggcgatggtcgccaccaaacaaacggcctag4080
    .................. pBR322_origin............................
    ............................................................
    4081aagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaata4140
    4081ttctcgatggttgagaaaaaggcttccattgaccgaagtcgtctcgcgtctatggtttat4140
    .................. pBR322_origin............................
    ............................................................
    4141ctgtccttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgccta4200
    4141gacaggaagatcacatcggcatcaatccggtggtgaagttcttgagacatcgtggcggat4200
    .................. pBR322_origin............................
    ............................................................
    4201catacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtc4260
    4201gtatggagcgagacgattaggacaatggtcaccgacgacggtcaccgctattcagcacag4260
    .................. pBR322_origin............................
    ............................................................
    4261ttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacgg4320
    4261aatggcccaacctgagttctgctatcaatggcctattccgcgtcgccagcccgacttgcc4320
    .................. pBR322_origin............................
    ............................................................
    4321ggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctac4380
    4321ccccaagcacgtgtgtcgggtcgaacctcgcttgctggatgtggcttgactctatggatg4380
    .................. pBR322_origin............................
    ............................................................
    4381agcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccgg4440
    4381tcgcactcgatactctttcgcggtgcgaagggcttccctctttccgcctgtccataggcc4440
    .................. pBR322_origin............................
    ............................................................
    4441taagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggt4500
    4441attcgccgtcccagccttgtcctctcgcgtgctccctcgaaggtccccctttgcggacca4500
    .................. pBR322_origin............................
    ............................................................
    4501atctttatagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgct4560
    4501tagaaatatcaggacagcccaaagcggtggagactgaactcgcagctaaaaacactacga4560
    .................. pBR322_origin............................
    ............................................................
    4561cgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctgg4620
    4561gcagtccccccgcctcggatacctttttgcggtcgttgcgccggaaaaatgccaaggacc4620
    .................. pBR322_origin............................
    ............................................................
    4621ccttttgctggccttttgctcacatgttctttcctgcgttatcccctgattctgtggata4680
    4621ggaaaacgaccggaaaacgagtgtacaagaaaggacgcaataggggactaagacacctat4680
    ............................................................
    ............................................................
    4681accgtattaccgccatgcat........................................4700
    4681tggcataatggcggtacgta........................................4700
    ............................................................

    References



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