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Sequence of pHcRed1-N1_1
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Sequence of pHcRed1-N1/1
: 4700 BP; 1116 A; 1277 C; 1255 G; 1052 T; 0 other; |
| AseI(7) | .......... | .......... | .......... | .......... | .......... |
| 1 | tagttattaa | tagtaatcaa | ttacggggtc | attagttcat | agcccatata | tggagttccg | 60 |
| 1 | atcaataatt | atcattagtt | aatgccccag | taatcaagta | tcgggtatat | acctcaaggc | 60 |
| .......... | .......... | ....... | CMV_immearly_pro | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | cgttacataa | cttacggtaa | atggcccgcc | tggctgaccg | cccaacgacc | <
font color="#000000" style="font-size:10px" face="Courier">cccgcccatt | 120 |
| 61 | gcaatgtatt | gaatgccatt | taccgggcgg | accgactggc | gggttgctgg | gggcgggtaa | 120 |
| .......... | ....... | CMV_immearly_pro | CAG_enh | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | gacgtcaata | atgacgtatg | ttcccatagt | aacgccaata | gggactttcc |
attgacgtca | 180 |
| 121 | ctgcagttat | tactgcatac | aagggtatca | ttgcggttat | ccctgaaagg | taactgcagt | 180 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | NdeI(234) |
| 181 | atgggtggag | tatttacggt | aaactgccca | cttggcagta | catcaagtgt |
atcatatgcc | 240 |
| 181 | tacccacctc | ataaatgcca | tttgacgggt | gaaccgtcat | gtagttcaca | tagtatacgg | 240 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 241 | aagtacgccc | cctattgacg | tcaatgacgg | taaatggccc | gcctggcatt |
atgcccagta | 300 |
| 241 | ttcatgcggg | ggataactgc | agttactgcc | atttaccggg | cggaccgtaa | tacgggtcat | 300 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | catgacctta | tgggactttc | ctacttggca | gtacatctac | gtattagtca |
tcgctattac | 360 |
| 301 | gtactggaat | accctgaaag | gatgaaccgt | catgtagatg | cataatcagt | agcgataatg | 360 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | catggtgatg | cggttttggc | agtacatcaa | tgggcgtgga | tagcggtttg | actcacgggg | 420 |
| 361 | gtaccactac | gccaaaaccg | tcatgtagtt | acccgcacct | atcgccaaac | tgagtgcccc | 420 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | atttccaagt | ctccacccca | ttgacgtcaa | tgggagtttg | ttttggcacc | aaaatcaacg | 480 |
| 421 | taaaggttca | gaggtggggt | aactgcagtt | accctcaaac | aaaaccgtgg | ttttagttgc | 480 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | ggactttcca | aaatgtcgta | acaactccgc | cccattgacg | caaatgggcg | gtaggcgtgt | 540 |
| 481 | cctgaaaggt | tttacagcat | tgttgaggcg | gggtaactgc | gtttacccgc | catccgcaca | 540 |
| .......... | ....... | CMV_immearly_pro | .. | CMV_fwd_pri CMV_pro | ..... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 541 | acggtgggag | gtctatataa | gcagagctgg | tttagtgaac | cgtcagatcc | gctagcgcta | 600 |
| 541 | tgccaccctc | cagatatatt | cgtctcgacc | aaatcacttg | gcagtctagg | cgatcgcgat | 600 |
| ....... | CMV_immearly_pro | CMV_pro | ....... | .......... | .......... |
| BglII,XhoI | SacI,HindIII EcoRI | PstI(638),SalI(639) | | |
| 601 | ccggactcag | atctcgagct | caagcttcga | attctgcagt | cgacggtacc | gcgggcccgg | 660 |
| 601 | ggcctgagtc | tagagctcga | gttcgaagct | taagacgtca | gctgccatgg | cgcccgggcc | 660 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| AgeI(666) | .......... | .......... | .......... | .......... | .......... |
| 661 | gatccaccgg | tcgccaccat | ggtgagcggc | ctgctgaagg | agagtatgcg | catcaagatg | 720 |
| 661 | ctaggtggcc | agcggtggta | ccactcgccg | gacgacttcc | tctcatacgc | gtagttctac | 720 |
| .......... | .......... | .......... | ORF 1 | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | tacatggagg | gcaccgtgaa | cggccactac | ttcaagtgcg | agggcgaggg | cgacggcaac | 780 |
| 721 | atgtacctcc | cgtggcactt | gccggtgatg | aagttcacgc | tcccgctccc | gctgccgttg | 780 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | PmlI(813) | .......... | .......... |
| 781 | cccttcgccg | gcacccagag | catgagaatc | cacgtgaccg | agggcgcccc | cctgcccttc | 840 |
| 781 | gggaagcggc | cgtgggtctc | gtactcttag | gtgcactggc | tcccgcgggg | ggacgggaag | 840 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | gccttcgaca | tcctggcccc | ctgctgcgag | tacggcagca | ggaccttcgt | gcaccacacc | 900 |
| 841 | cggaagctgt | aggaccgggg | gacgacgctc | atgccgtcgt | cctggaagca | cgtggtgtgg | 900 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | gccgagatcc | ccgacttctt | caagcagagc | ttccccgagg | gcttcacctg | ggagagaacc | 960 |
| 901 | cggctctagg | ggctgaagaa | gttcgtctcg | aaggggctcc | cgaagtggac | cctctcttgg | 960 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | accacctacg | aggacggcgg | catcctgacc | gcccaccagg | acaccagcct | ggagggcaac | 1020 |
| 961 | tggtggatgc | tcctgccgcc | gtaggactgg | cgggtggtcc | tgtggtcgga | cctcccgttg | 1020 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1021 | tgcctgatct | acaaggtgaa | ggtgcacggc | accaacttcc | ccgccgacgg | ccccgtgatg | 1080 |
| 1021 | acggactaga | tgttccactt | ccacgtgccg | tggttgaagg | ggcggctgcc | ggggcactac | 1080 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1081 | aagaacaaga | gcggcggctg | ggagcccagc | accgaggtgg | tgtaccccga | gaacggcgtg | 1140 |
| 1081 | ttcttgttct | cgccgccgac | cctcgggtcg | tggctccacc | acatggggct | cttgccgcac | 1140 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | ctgtgcggcc | ggaacgtgat | ggccctgaag | gtgggcgacc | ggcacctgat | ctgccaccac | 1200 |
| 1141 | gacacgccgg | ccttgcacta | ccgggacttc | cacccgctgg | ccgtggacta | gacggtggtg | 1200 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | tacaccagct | accggagcaa | gaaggccgtg | cgcgccctga | ccatgcccgg | cttccacttc | 1260 |
| 1201 | atgtggtcga | tggcctcgtt | cttccggcac | gcgcgggact | ggtacgggcc | gaaggtgaag | 1260 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1261 | accgacatcc | ggctccagat | gctgcggaag | aagaaggacg | agtacttcga | gctgtacgag | 1320 |
| 1261 | tggctgtagg | ccgaggtcta | cgacgccttc | ttcttcctgc | tcatgaagct | cgacatgctc | 1320 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | NotI(1368) | .......... |
| 1321 | gccagcgtgg | cccggtacag | cgacctgccc | gagaaggcca | actgaagcgg | ccgcgactct | 1380 |
| 1321 | cggtcgcacc | gggccatgtc | gctggacggg | ctcttccggt | tgacttcgcc | ggcgctgaga | 1380 |
| .......... | .......... | ORF 1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1381 | agatcataat | cagccatacc | acatttgtag | aggttttact | tgctttaaaa | aacctcccac | 1440 |
| 1381 | tctagtatta | gtcggtatgg | tgtaaacatc | tccaaaatga | acgaaatttt | ttggagggtg | 1440 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | HpaI(1487) | .......... |
| 1441 | acctccccct | gaacctgaaa | cataaaatga | atgcaattgt | tgttgttaac | ttgtttattg | 1500 |
| 1441 | tggaggggga | cttggacttt | gtattttact | tacgttaaca | acaacaattg | aacaaataac | 1500 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | cagcttataa | tggttacaaa | taaagcaata | gcatcacaaa | tttcacaaat | aaagcatttt | 1560 |
| 1501 | gtcgaatatt | accaatgttt | atttcgttat | cgtagtgttt | aaagtgttta | tttcgtaaaa | 1560 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | ......... | AflII(1606) | ......... |
| 1561 | tttcactgca | ttctagttgt | ggtttgtcca | aactcatcaa | tgtatcttaa | ggcgtaaatt | 1620 |
| 1561 | aaagtgacgt | aagatcaaca | ccaaacaggt | ttgagtagtt | acatagaatt | ccgcatttaa | 1620 |
| .......... | ......... | EBV_rev_pri | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1621 | gtaagcgtta | atattttgtt | aaaattcgcg | ttaaattttt | gttaaatcag | ctcatttttt | 1680 |
| 1621 | cattcgcaat | tataaaacaa | ttttaagcgc | aatttaaaaa | caatttagtc | gagtaaaaaa | 1680 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1681 | aaccaatagg | ccgaaatcgg | caaaatccct | tataaatcaa | aagaatagac | cgagataggg | 1740 |
| 1681 | ttggttatcc | ggctttagcc | gttttaggga | atatttagtt | ttcttatctg | gctctatccc | 1740 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | ttgagtgttg | ttccagtttg | gaacaagagt | ccactattaa | agaacgtgga | ctccaacgtc | 1800 |
| 1741 | aactcacaac | aaggtcaaac | cttgttctca | ggtgataatt | tcttgcacct | gaggttgcag | 1800 |
| .......... | .......... | .......... | f1_origin | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | aaagggcgaa | aaaccgtcta | tcagggcgat | ggcccactac | gtgaaccatc | accctaatca | 1860 |
| 1801 | tttcccgctt | tttggcagat | agtcccgcta | ccgggtgatg | cacttggtag | tgggattagt | 1860 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1861 | agttttttgg | ggtcgaggtg | ccgtaaagca | ctaaatcgga | accctaaagg | gagcccccga | 1920 |
| 1861 | tcaaaaaacc | ccagctccac | ggcatttcgt | gatttagcct | tgggatttcc | ctcgggggct | 1920 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | tttagagctt | gacggggaaa | gccggcgaac | gtggcgagaa | aggaagggaa | gaaagcgaaa | 1980 |
| 1921 | aaatctcgaa | ctgccccttt | cggccgcttg | caccgctctt | tccttccctt | ctttcgcttt | 1980 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | ggagcgggcg | ctagggcgct | ggcaagtgta | gcggtcacgc | tgcgcgtaac | caccacaccc | 2040 |
| 1981 | cctcgcccgc | gatcccgcga | ccgttcacat | cgccagtgcg | acgcgcattg | gtggtgtggg | 2040 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | gccgcgctta | atgcgccgct | acagggcgcg | tcaggtggca | cttttcgggg | aaatgtgcgc | 2100 |
| 2041 | cggcgcgaat | tacgcggcga | tgtcccgcgc | agtccaccgt | gaaaagcccc | tttacacgcg | 2100 |
| f1_origin | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | ggaaccccta | tttgtttatt | tttctaaata | cattcaaata | tgtatccgct | catgagacaa | 2160 |
| 2101 | ccttggggat | aaacaaataa | aaagatttat | gtaagtttat | acataggcga | gtactctgtt | 2160 |
| .......... | .......... | .......... | .......... | AmpR_pro | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | taaccctgat | aaatgcttca | ataatattga | aaaaggaaga | gtcctgaggc | ggaaagaacc | 2220 |
| 2161 | attgggacta | tttacgaagt | tattataact | ttttccttct | caggactccg | cctttcttgg | 2220 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | agctgtggaa | tgtgtgtcag | ttagggtgtg | gaaagtcccc | aggctcccca | gcaggcagaa | 2280 |
| 2221 | tcgacacctt | acacacagtc | aatcccacac | ctttcagggg | tccgaggggt | cgtccgtctt | 2280 |
| ......... | pBABE_3_pri | ......... | SV40_enh | SV40_pro | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | gtatgcaaag | catgcatctc | aattagtcag | caaccaggtg | tggaaagtcc | ccaggctccc | 2340 |
| 2281 | catacgtttc | gtacgtagag | ttaatcagtc | gttggtccac | acctttcagg | ggtccgaggg | 2340 |
| .......... | ...... | SV40_enh SV40_pro | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | cagcaggcag | aagtatgcaa | agcatgcatc | tcaattagtc | agcaaccata | gtcccgcccc | 2400 |
| 2341 | gtcgtccgtc | ttcatacgtt | tcgtacgtag | agttaatcag | tcgttggtat | cagggcgggg | 2400 |
| .......... | ...... | SV40_enh SV40_pro | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | taactccgcc | catcccgccc | ctaactccgc | ccagttccgc | ccattctccg | ccccatggct | 2460 |
| 2401 | attgaggcgg | gtagggcggg | gattgaggcg | ggtcaaggcg | ggtaagaggc | ggggtaccga | 2460 |
| .......... | ..... | SV40_enh SV40_pro | SV40_origin | ..... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | gactaatttt | ttttatttat | gcagaggccg | aggccgcctc | ggcctctgag | ctattccaga | 2520 |
| 2461 | ctgattaaaa | aaaataaata | cgtctccggc | tccggcggag | ccggagactc | gataaggtct | 2520 |
| ... | SV40_origin | SV40_pro SV40pro_F_pri | ... | .......... | .......... |
| .......... | .......... | StuI(2545) | .......... | ClaI(2564) | .......... |
| 2521 | agtagtgagg | aggctttttt | ggaggcctag | gcttttgcaa | agatcgatca | agagacagga | 2580 |
| 2521 | tcatcactcc | tccgaaaaaa | cctccggatc | cgaaaacgtt | tctagctagt | tctctgtcct | 2580 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | tgaggatcgt | ttcgcatgat | tgaacaagat | ggattgcacg | caggttctcc | ggccgcttgg | 2640 |
| 2581 | actcctagca | aagcgtacta | acttgttcta | cctaacgtgc | gtccaagagg | ccggcgaacc | 2640 |
| .......... | .......... | ........ | ORF 1 Neomycin | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | gtggagaggc | tattcggcta | tgactgggca | caacagacaa | tcggctgctc | tgatgccgcc | 2700 |
| 2641 | cacctctccg | ataagccgat | actgacccgt | gttgtctgtt | agccgacgag | actacggcgg | 2700 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | gtgttccggc | tgtcagcgca | ggggcgcccg | gttctttttg | tcaagaccga | cctgtccggt | 2760 |
| 2701 | cacaaggccg | acagtcgcgt | ccccgcgggc | caagaaaaac | agttctggct | ggacaggcca | 2760 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | MscI(2806) | .......... |
| 2761 | gccctgaatg | aactgcaaga | cgaggcagcg | cggctatcgt | ggctggccac | gacgggcgtt | 2820 |
| 2761 | cgggacttac | ttgacgttct | gctccgtcgc | gccgatagca | ccgaccggtg | ctgcccgcaa | 2820 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2821 | ccttgcgcag | ctgtgctcga | cgttgtcact | gaagcgggaa | gggactggct | gctattgggc | 2880 |
| 2821 | ggaacgcgtc | gacacgagct | gcaacagtga | cttcgccctt | ccctgaccga | cgataacccg | 2880 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2881 | gaagtgccgg | ggcaggatct | cctgtcatct | caccttgctc | ctgccgagaa | agtatccatc | 2940 |
| 2881 | cttcacggcc | ccgtcctaga | ggacagtaga | gtggaacgag | gacggctctt | tcataggtag | 2940 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2941 | atggctgatg | caatgcggcg | gctgcatacg | cttgatccgg | ctacctgccc | attcgaccac | 3000 |
| 2941 | taccgactac | gttacgccgc | cgacgtatgc | gaactaggcc | gatggacggg | taagctggtg | 3000 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | caagcgaaac | atcgcatcga | gcgagcacgt | actcggatgg | aagccggtct | tgtcgatcag | 3060 |
| 3001 | gttcgctttg | tagcgtagct | cgctcgtgca | tgagcctacc | ttcggccaga | acagctagtc | 3060 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | gatgatctgg | acgaagagca | tcaggggctc | gcgccagccg | aactgttcgc | caggctcaag | 3120 |
| 3061 | ctactagacc | tgcttctcgt | agtccccgag | cgcggtcggc | ttgacaagcg | gtccgagttc | 3120 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | gcgagcatgc | ccgacggcga | ggatctcgtc | gtgacccatg | gcgatgcctg | cttgccgaat | 3180 |
| 3121 | cgctcgtacg | ggctgccgct | cctagagcag | cactgggtac | cgctacggac | gaacggctta | 3180 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | atcatggtgg | aaaatggccg | cttttctgga | ttcatcgact | gtggccggct | gggtgtggcg | 3240 |
| 3181 | tagtaccacc | ttttaccggc | gaaaagacct | aagtagctga | caccggccga | cccacaccgc | 3240 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | gaccgctatc | aggacatagc | gttggctacc | cgtgatattg | ctgaagagct | tggcggcgaa | 3300 |
| 3241 | ctggcgatag | tcctgtatcg | caaccgatgg | gcactataac | gacttctcga | accgccgctt | 3300 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | tgggctgacc | gcttcctcgt | gctttacggt | atcgccgctc | ccgattcgca | gcgcatcgcc | 3360 |
| 3301 | acccgactgg | cgaaggagca | cgaaatgcca | tagcggcgag | ggctaagcgt | cgcgtagcgg | 3360 |
| .......... | ........ | ORF 1 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | ttctatcgcc | ttcttgacga | gttcttctga | gcgggactct | ggggttcgaa | atgaccgacc | 3420 |
| 3361 | aagatagcgg | aagaactgct | caagaagact | cgccctgaga | ccccaagctt | tactggctgg | 3420 |
| ........ | ORF 1 Neomycin | ........ | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | aagcgacgcc | caacctgcca | tcacgagatt | tcgattccac | cgccgccttc | tatgaaaggt | 3480 |
| 3421 | ttcgctgcgg | gttggacggt | agtgctctaa | agctaaggtg | gcggcggaag | atactttcca | 3480 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | tgggcttcgg | aatcgttttc | cgggacgccg | gctggatgat | cctccagcgc | ggggatctca | 3540 |
| 3481 | acccgaagcc | ttagcaaaag | gccctgcggc | cgacctacta | ggaggtcgcg | cccctagagt | 3540 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | tgctggagtt | cttcgcccac | cctaggggga | ggctaactga | aacacggaag | gagacaatac | 3600 |
| 3541 | acgacctcaa | gaagcgggtg | ggatccccct | ccgattgact | ttgtgccttc | ctctgttatg | 3600 |
| .......... | .......... | .......... | .......... | TK_PA_term | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | cggaaggaac | ccgcgctatg | acggcaataa | aaagacagaa | taaaacgcac | ggtgttgggt | 3660 |
| 3601 | gccttccttg | ggcgcgatac | tgccgttatt | tttctgtctt | attttgcgtg | ccacaaccca | 3660 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | cgtttgttca | taaacgcggg | gttcggtccc | agggctggca | ctctgtcgat | accccaccga | 3720 |
| 3661 | gcaaacaagt | atttgcgccc | caagccaggg | tcccgaccgt | gagacagcta | tggggtggct | 3720 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | gaccccattg | gggccaatac | gcccgcgttt | cttccttttc | cccaccccac | cccccaagtt | 3780 |
| 3721 | ctggggtaac | cccggttatg | cgggcgcaaa | gaaggaaaag | gggtggggtg | gggggttcaa | 3780 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | cgggtgaagg | cccagggctc | gcagccaacg | tcggggcggc | aggccctgcc | atagcctcag | 3840 |
| 3781 | gcccacttcc | gggtcccgag | cgtcggttgc | agccccgccg | tccgggacgg | tatcggagtc | 3840 |
| .......... | .......... | TK_PA_term | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | gttactcata | tatactttag | attgatttaa | aacttcattt | ttaatttaaa | aggatctagg | 3900 |
| 3841 | caatgagtat | atatgaaatc | taactaaatt | ttgaagtaaa | aattaaattt | tcctagatcc | 3900 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | tgaagatcct | ttttgataat | ctcatgacca | aaatccctta | acgtgagttt | tcgttccact | 3960 |
| 3901 | acttctagga | aaaactatta | gagtactggt | tttagggaat | tgcactcaaa | agcaaggtga | 3960 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | gagcgtcaga | ccccgtagaa | aagatcaaag | gatcttcttg | agatcctttt | tttctgcgcg | 4020 |
| 3961 | ctcgcagtct | ggggcatctt | ttctagtttc | ctagaagaac | tctaggaaaa | aaagacgcgc | 4020 |
| .......... | .......... | .......... | ........ | pBR322_origin | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4021 | taatctgctg | cttgcaaaca | aaaaaaccac | cgctaccagc | ggtggtttgt | ttgccggatc | 4080 |
| 4021 | attagacgac | gaacgtttgt | ttttttggtg | gcgatggtcg | ccaccaaaca | aacggcctag | 4080 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | aagagctacc | aactcttttt | ccgaaggtaa | ctggcttcag | cagagcgcag | ataccaaata | 4140 |
| 4081 | ttctcgatgg | ttgagaaaaa | ggcttccatt | gaccgaagtc | gtctcgcgtc | tatggtttat | 4140 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | ctgtccttct | agtgtagccg | tagttaggcc | accacttcaa | gaactctgta | gcaccgccta | 4200 |
| 4141 | gacaggaaga | tcacatcggc | atcaatccgg | tggtgaagtt | cttgagacat | cgtggcggat | 4200 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | catacctcgc | tctgctaatc | ctgttaccag | tggctgctgc | cagtggcgat | aagtcgtgtc | 4260 |
| 4201 | gtatggagcg | agacgattag | gacaatggtc | accgacgacg | gtcaccgcta | ttcagcacag | 4260 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | ttaccgggtt | ggactcaaga | cgatagttac | cggataaggc | gcagcggtcg | ggctgaacgg | 4320 |
| 4261 | aatggcccaa | cctgagttct | gctatcaatg | gcctattccg | cgtcgccagc | ccgacttgcc | 4320 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | ggggttcgtg | cacacagccc | agcttggagc | gaacgaccta | caccgaactg | agatacctac | 4380 |
| 4321 | ccccaagcac | gtgtgtcggg | tcgaacctcg | cttgctggat | gtggcttgac | tctatggatg | 4380 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | agcgtgagct | atgagaaagc | gccacgcttc | ccgaagggag | aaaggcggac | aggtatccgg | 4440 |
| 4381 | tcgcactcga | tactctttcg | cggtgcgaag | ggcttccctc | tttccgcctg | tccataggcc | 4440 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | taagcggcag | ggtcggaaca | ggagagcgca | cgagggagct | tccaggggga | aacgcctggt | 4500 |
| 4441 | attcgccgtc | ccagccttgt | cctctcgcgt | gctccctcga | aggtccccct | ttgcggacca | 4500 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4501 | atctttatag | tcctgtcggg | tttcgccacc | tctgacttga | gcgtcgattt | ttgtgatgct | 4560 |
| 4501 | tagaaatatc | aggacagccc | aaagcggtgg | agactgaact | cgcagctaaa | aacactacga | 4560 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4561 | cgtcaggggg | gcggagccta | tggaaaaacg | ccagcaacgc | ggccttttta | cggttcctgg | 4620 |
| 4561 | gcagtccccc | cgcctcggat | acctttttgc | ggtcgttgcg | ccggaaaaat | gccaaggacc | 4620 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4621 | ccttttgctg | gccttttgct | cacatgttct | ttcctgcgtt | atcccctgat | tctgtggata | 4680 |
| 4621 | ggaaaacgac | cggaaaacga | gtgtacaaga | aaggacgcaa | taggggacta | agacacctat | 4680 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4681 | accgtattac | cgccatgcat | .......... | .......... | .......... | .......... | 4700 |
| 4681 | tggcataatg | gcggtacgta | .......... | .......... | .......... | .......... | 4700 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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