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Sequence of pIRESbleo3
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View the plasmid map on line
Sequence of pIRESbleo3
: 4874 BP; 1158 A; 1263 C; 1237 G; 1216 T; 0 other; |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1 | gacggatcgg | gagatctccc | gatcccctat | ggtcgactct | cagtacaatc | tgctctgatg | 60 |
| 1 | ctgcctagcc | ctctagaggg | ctaggggata | ccagctgaga | gtcatgttag | acgagactac | 60 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | ccgcatagtt | aagccagtat | ctgctccctg | cttgtgtgtt | ggaggtcgct | gagtagtgcg | 120 |
| 61 | ggcgtatcaa | ttcggtcata | gacgagggac | gaacacacaa | cctccagcga | ctcatcacgc | 120 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | cgagcaaaat | ttaagctaca | acaaggcaag | gcttgaccga | caattgcatg | aagaatctgc | 180 |
| 121 | gctcgtttta | aattcgatgt | tgttccgttc | cgaactggct | gttaacgtac | ttcttagacg | 180 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | NruI(208) | .......... | .......... | .......... |
| 181 | ttagggttag | gcgttttgcg | ctgcttcgcg | atgtacgggc | cagatatacg | cgttgacatt | 240 |
| 181 | aatcccaatc | cgcaaaacgc | gacgaagcgc | tacatgcccg | gtctatatgc | gcaactgtaa | 240 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 241 | gattattgac | tagttattaa | tagtaatcaa | ttacggggtc | attagttcat | agcccatata | 300 |
| 241 | ctaataactg | atcaataatt | atcattagtt | aatgccccag | taatcaagta | tcgggtatat | 300 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | tggagttccg | cgttacataa | cttacggtaa | atggcccgcc | tggctgaccg | cccaacgacc | 360 |
| 301 | acctcaaggc | gcaatgtatt | gaatgccatt | taccgggcgg | accgactggc | gggttgctgg | 360 |
| .......... | ....... | CMV_immearly_pro | CAG_enh | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | cccgcccatt | gacgtcaata | atgacgtatg | ttcccatagt | aacgccaata |
gggactttcc | 420 |
| 361 | gggcgggtaa | ctgcagttat | tactgcatac | aagggtatca | ttgcggttat | ccctgaaagg | 420 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | attgacgtca | atgggtggac | tatttacggt | aaactgccca | cttggcagta |
catcaagtgt | 480 |
| 421 | taactgcagt | tacccacctg | ataaatgcca | tttgacgggt | gaaccgtcat | gtagttcaca | 480 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| NdeI(484) | .......... | .......... | .......... | .......... | .......... |
| 481 | atcatatgcc | aagtacgccc | cctattgacg | tcaatgacgg | taaatggccc |
gcctggcatt | 540 |
| 481 | tagtatacgg | ttcatgcggg | ggataactgc | agttactgcc | atttaccggg | cggaccgtaa | 540 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 541 | atgcccagta | catgacctta | tgggactttc | ctacttggca | gtacatctac |
gtattagtca | 600 |
| 541 | tacgggtcat | gtactggaat | accctgaaag | gatgaaccgt | catgtagatg | cataatcagt | 600 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 601 | tcgctattac | catggtgatg | cggttttggc | agtacatcaa | tgggcgtgga | tagcggtttg | 660 |
| 601 | agcgataatg | gtaccactac | gccaaaaccg | tcatgtagtt | acccgcacct | atcgccaaac | 660 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 661 | actcacgggg | atttccaagt | ctccacccca | ttgacgtcaa | tgggagtttg | ttttggcacc | 720 |
| 661 | tgagtgcccc | taaaggttca | gaggtggggt | aactgcagtt | accctcaaac | aaaaccgtgg | 720 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | aaaatcaacg | ggactttcca | aaatgtcgta | acaactccgc | cccattgacg | caaatgggcg | 780 |
| 721 | ttttagttgc | cctgaaaggt | tttacagcat | tgttgaggcg | gggtaactgc | gtttacccgc | 780 |
| .......... | ....... | CMV_immearly_pro | ....... | ......... | CMV_fwd_pri |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 781 | gtaggcgtgt | acggtgggag | gtctatataa | gcagagctct | ctggctaact | agagaaccca | 840 |
| 781 | catccgcaca | tgccaccctc | cagatatatt | cgtctcgaga | gaccgattga | tctcttgggt | 840 |
| CMV_fwd_pri | ..... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | ctgcttactg | gcttatcgaa | attaatacga | ctcactatag | ggagacccaa | gcttggtacc | 900 |
| 841 | gacgaatgac | cgaatagctt | taattatgct | gagtgatatc | cctctgggtt | cgaaccatgg | 900 |
| CMV_immearly_pro | .... | .......... | T7_pro | .......... | .......... |
| ClaI0),EcoRV(914) NotI(920) | | EcoRI(934) | BamHI(943) | .......... |
| 901 | gagctcggat | cgatatctgc | ggccgcgtcg | acggaattca | gtggatccac | tagtaacggc | 960 |
| 901 | ctcgagccta | gctatagacg | ccggcgcagc | tgccttaagt | cacctaggtg | atcattgccg | 960 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | cgccagtgtg | ctggaattaa | ttcgctgtct | gcgagggcca | gctgttgggg | tgagtactcc | 1020 |
| 961 | gcggtcacac | gaccttaatt | aagcgacaga | cgctcccggt | cgacaacccc | actcatgagg | 1020 |
| .......... | .......... | .......... | synth_int | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1021 | ctctcaaaag | cgggcatgac | ttctgcgcta | agattgtcag | tttccaaaaa | cgaggaggat | 1080 |
| 1021 | gagagttttc | gcccgtactg | aagacgcgat | tctaacagtc | aaaggttttt | gctcctccta | 1080 |
| .......... | .......... | synth_int | .......... | .......... | .......... |
| ......... | SacII(1100) | ......... | .......... | .......... | .......... |
| 1081 | ttgatattca | cctggcccgc | ggtgatgcct | ttgagggtgg | ccgcgtccat | ctggtcagaa | 1140 |
| 1081 | aactataagt | ggaccgggcg | ccactacgga | aactcccacc | ggcgcaggta | gaccagtctt | 1140 |
| .......... | .......... | synth_int | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | aagacaatct | ttttgttgtc | aagcttgagg | tgtggcaggc | ttgagatctg | gccatacact | 1200 |
| 1141 | ttctgttaga | aaaacaacag | ttcgaactcc | acaccgtccg | aactctagac | cggtatgtga | 1200 |
| .......... | .......... | synth_int | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | tgagtgacaa | tgacatccac | tttgcctttc | tctccacagg | tgtccactcc | caggtccaac | 1260 |
| 1201 | actcactgtt | actgtaggtg | aaacggaaag | agaggtgtcc | acaggtgagg | gtccaggttg | 1260 |
| .......... | .......... | synth_int | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1261 | tgcaggtcga | gcatgcatct | agggcggcca | attccgcccc | tctccctccc | ccccccctaa | 1320 |
| 1261 | acgtccagct | cgtacgtaga | tcccgccggt | taaggcgggg | agagggaggg | gggggggatt | 1320 |
| synth_int | .......... | .......... | .......... | IRES | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1321 | cgttactggc | cgaagccgct | tggaataagg | ccggtgtgcg | tttgtctata | tgttattttc | 1380 |
| 1321 | gcaatgaccg | gcttcggcga | accttattcc | ggccacacgc | aaacagatat | acaataaaag | 1380 |
| .......... | .......... | IRES | .......... | .......... | .......... |
| .......... | .......... | .......... | ApaI(1414) | .......... | .......... |
| 1381 | caccatattg | ccgtcttttg | gcaatgtgag | ggcccggaaa | cctggccctg | tcttcttgac | 1440 |
| 1381 | gtggtataac | ggcagaaaac | cgttacactc | ccgggccttt | ggaccgggac | agaagaactg | 1440 |
| .......... | .......... | IRES | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1441 | gagcattcct | aggggtcttt | cccctctcgc | caaaggaatg | caaggtctgt | tgaatgtcgt | 1500 |
| 1441 | ctcgtaagga | tccccagaaa | ggggagagcg | gtttccttac | gttccagaca | acttacagca | 1500 |
| .......... | .......... | IRES | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | gaaggaagca | gttcctctgg | aagcttcttg | aagacaaaca | acgtctgtag | cgaccctttg | 1560 |
| 1501 | cttccttcgt | caaggagacc | ttcgaagaac | ttctgtttgt | tgcagacatc | gctgggaaac | 1560 |
| .......... | .......... | IRES | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | PmlI(1613) |
| 1561 | caggcagcgg | aaccccccac | ctggcgacag | gtgcctctgc | ggccaaaagc | cacgtgtata | 1620 |
| 1561 | gtccgtcgcc | ttggggggtg | gaccgctgtc | cacggagacg | ccggttttcg | gtgcacatat | 1620 |
| .......... | .......... | IRES | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1621 | agatacacct | gcaaaggcgg | cacaacccca | gtgccacgtt | gtgagttgga | tagttgtgga | 1680 |
| 1621 | tctatgtgga | cgtttccgcc | gtgttggggt | cacggtgcaa | cactcaacct | atcaacacct | 1680 |
| .......... | .......... | IRES | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1681 | aagagtcaaa | tggctctcct | caagcgtatt | caacaagggg | ctgaaggatg | cccagaaggt | 1740 |
| 1681 | ttctcagttt | accgagagga | gttcgcataa | gttgttcccc | gacttcctac | gggtcttcca | 1740 |
| .......... | .......... | IRES | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | accccattgt | atgggatctg | atctggggcc | tcggtgcaca | tgctttacat | g
tgtttagtc | 1800 |
| 1741 | tggggtaaca | taccctagac | tagaccccgg | agccacgtgt | acgaaatgta | cacaaatcag | 1800 |
| .......... | .......... | IRES | .......... | ORF 1 | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | gaggttaaaa | aaacgtctag | gccccccgaa | ccacggggac | gtggttttcc | tttgaaaaac | 1860 |
| 1801 | ctccaatttt | tttgcagatc | cggggggctt | ggtgcccctg | caccaaaagg | aaactttttg | 1860 |
| .......... | ....... | IRES ORF 1 ORF 1 | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1861 | acgatgataa | gcttgccaca | acccagcttg | ccagctgggg | cgccctctgg | taaggttggg | 1920 |
| 1861 | tgctactatt | cgaacggtgt | tgggtcgaac | ggtcgacccc | gcgggagacc | attccaaccc | 1920 |
| .......... | ......... | ORF 1 ORF 1 | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | aagccctgca | gatctgatca | ccatggccaa | gttgaccagt | gccgt
tccgg | tgctcaccgc | 1980 |
| 1921 | ttcgggacgt | ctagactagt | ggtaccggtt | caactggtca | cggcaaggcc | acgagtggcg | 1980 |
| .......... | ......... | ORF 1 ORF 1 | ........ | bleo sh_ble | ......... |
| .......... | .......... | .......... | .......... | .......... | SmaI(2033) |
| 1981 | gcgcgacgtc | gccggagcgg | tcgagttctg | gaccgaccgg |
ctcgggttct | cccgggactt | 2040 |
| 1981 | cgcgctgcag | cggcctcgcc | agctcaagac | ctggctggcc | gagcccaaga | gggccctgaa | 2040 |
| .......... | ... | ORF 1 ORF 1 bleo sh_ble | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | cgtggaggac | gacttcgccg | gtgtggtccg | ggacgacgtg |
accctgttca | tcagcgcggt | 2100 |
| 2041 | gcacctcctg | ctgaagcggc | cacaccaggc | cctgctgcac | tgggacaagt | agtcgcgcca | 2100 |
| .......... | ... | ORF 1 ORF 1 bleo sh_ble | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | ccaggaccag | gtggtgccgg | acaacaccct | ggcctgggtg |
tgggtgcgcg | gcctggacga | 2160 |
| 2101 | ggtcctggtc | caccacggcc | tgttgtggga | ccggacccac | acccacgcgc | cggacctgct | 2160 |
| .......... | ... | ORF 1 ORF 1 bleo sh_ble | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | gctgtacgcc | gagtggtcgg | aggtcgtgtc | cacgaacttc |
cgggacgcct | ccgggccggc | 2220 |
| 2161 | cgacatgcgg | ctcaccagcc | tccagcacag | gtgcttgaag | gccctgcgga | ggcccggccg | 2220 |
| .......... | ... | ORF 1 ORF 1 bleo sh_ble | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | catgaccgag | atcggcgagc | agccgtgggg | gcgggagttc |
gccctgcgcg | acccggccgg | 2280 |
| 2221 | gtactggctc | tagccgctcg | tcggcacccc | cgccctcaag | cgggacgcgc | tgggccggcc | 2280 |
| .......... | ... | ORF 1 ORF 1 bleo sh_ble | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | caactgcgtg | cacttcgtgg | ccgaggagca | ggactgaccg |
acgccgacca | acaccgccgg | 2340 |
| 2281 | gttgacgcac | gtgaagcacc | ggctcctcgt | cctgactggc | tgcggctggt | tgtggcggcc | 2340 |
| ........ | bleo sh_ble | ORF 1 ORF 1 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | tccgacgcgg | cccgacgggt | ccgaggcatc | gtcgactcta | gataactgat | cataatcagc | 2400 |
| 2341 | aggctgcgcc | gggctgccca | ggctccgtag | cagctgagat | ctattgacta | gtattagtcg | 2400 |
| .......... | ......... | ORF 1 ORF 1 | ......... | ......... | SV40_PA_term |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | cataccacat | ttgtagaggt | tttacttgct | ttaaaaaacc | tcccacacct | ccccctgaac | 2460 |
| 2401 | gtatggtgta | aacatctcca | aaatgaacga | aattttttgg | agggtgtgga | gggggacttg | 2460 |
| .......... | ......... | SV40_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | HpaI(2493) | .......... | .......... |
| 2461 | ctgaaacata | aaatgaatgc | aattgttgtt | gttaacttgt | ttattgcagc | ttataatggt | 2520 |
| 2461 | gactttgtat | tttacttacg | ttaacaacaa | caattgaaca | aataacgtcg | aatattacca | 2520 |
| .......... | ......... | SV40_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2521 | tacaaataaa | gcaatagcat | cacaaatttc | acaaataaag | catttttttc | actgcattct | 2580 |
| 2521 | atgtttattt | cgttatcgta | gtgtttaaag | tgtttatttc | gtaaaaaaag | tgacgtaaga | 2580 |
| .......... | ......... | SV40_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | agttgtggtt | tgtccaaact | catcaatgta | tcttaacgcg | tcgagtgcat | tctagttgtg | 2640 |
| 2581 | tcaacaccaa | acaggtttga | gtagttacat | agaattgcgc | agctcacgta | agatcaacac | 2640 |
| ... | SV40_PA_term EBV_rev_pri | ... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | gtttgtccaa | actcatcaat | gtatcttatc | atgtctgtat | accgtcgacc | tctagctaga | 2700 |
| 2641 | caaacaggtt | tgagtagtta | catagaatag | tacagacata | tggcagctgg | agatcgatct | 2700 |
| EBV_rev_pri | ........ | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | gcttggcgta | atcatggtca | tagctgtttc | ctgtgtgaaa | ttgttatccg | ctcacaattc | 2760 |
| 2701 | cgaaccgcat | tagtaccagt | atcgacaaag | gacacacttt | aacaataggc | gagtgttaag | 2760 |
| .......... | ....... | M13_reverse_pri | .... | M13_pUC_rev_pri | ....... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2761 | cacacaacat | acgagccgga | agcataaagt | gtaaagcctg | gggtgcctaa | tgagtgagct | 2820 |
| 2761 | gtgtgttgta | tgctcggcct | tcgtatttca | catttcggac | cccacggatt | actcactcga | 2820 |
| .......... | lac_pro | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2821 | aactcacatt | aattgcgttg | cgctcactgc | ccgctttcca | gtcgggaaac | ctgtcgtgcc | 2880 |
| 2821 | ttgagtgtaa | ttaacgcaac | gcgagtgacg | ggcgaaaggt | cagccctttg | gacagcacgg | 2880 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2881 | agctgcatta | atgaatcggc | caacgcgcgg | ggagaggcgg | tttgcgtatt | gggcgctctt | 2940 |
| 2881 | tcgacgtaat | tacttagccg | gttgcgcgcc | cctctccgcc | aaacgcataa | cccgcgagaa | 2940 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2941 | ccgcttcctc | gctcactgac | tcgctgcgct | cggtcgttcg | gctgcggcga | gcggtatcag | 3000 |
| 2941 | ggcgaaggag | cgagtgactg | agcgacgcga | gccagcaagc | cgacgccgct | cgccatagtc | 3000 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | ctcactcaaa | ggcggtaata | cggttatcca | cagaatcagg | ggataacgca | ggaaagaaca | 3060 |
| 3001 | gagtgagttt | ccgccattat | gccaataggt | gtcttagtcc | cctattgcgt | cctttcttgt | 3060 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | tgtgagcaaa | aggccagcaa | aaggccagga | accgtaaaaa | ggccgcgttg | ctggcgtttt | 3120 |
| 3061 | acactcgttt | tccggtcgtt | ttccggtcct | tggcattttt | ccggcgcaac | gaccgcaaaa | 3120 |
| .......... | .......... | .......... | .......... | ........ | pBR322_origin |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | tccataggct | ccgcccccct | gacgagcatc | acaaaaatcg | acgctcaagt | cagaggtggc | 3180 |
| 3121 | aggtatccga | ggcgggggga | ctgctcgtag | tgtttttagc | tgcgagttca | gtctccaccg | 3180 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | gaaacccgac | aggactataa | agataccagg | cgtttccccc | tggaagctcc | ctcgtgcgct | 3240 |
| 3181 | ctttgggctg | tcctgatatt | tctatggtcc | gcaaaggggg | accttcgagg | gagcacgcga | 3240 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | ctcctgttcc | gaccctgccg | cttaccggat | acctgtccgc | ctttctccct | tcgggaagcg | 3300 |
| 3241 | gaggacaagg | ctgggacggc | gaatggccta | tggacaggcg | gaaagaggga | agcccttcgc | 3300 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | tggcgctttc | tcaatgctca | cgctgtaggt | atctcagttc | ggtgtaggtc | gttcgctcca | 3360 |
| 3301 | accgcgaaag | agttacgagt | gcgacatcca | tagagtcaag | ccacatccag | caagcgaggt | 3360 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | agctgggctg | tgtgcacgaa | ccccccgttc | agcccgaccg | ctgcgcctta | tccggtaact | 3420 |
| 3361 | tcgacccgac | acacgtgctt | ggggggcaag | tcgggctggc | gacgcggaat | aggccattga | 3420 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | atcgtcttga | gtccaacccg | gtaagacacg | acttatcgcc | actggcagca | gccactggta | 3480 |
| 3421 | tagcagaact | caggttgggc | cattctgtgc | tgaatagcgg | tgaccgtcgt | cggtgaccat | 3480 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | acaggattag | cagagcgagg | tatgtaggcg | gtgctacaga | gttcttgaag | tggtggccta | 3540 |
| 3481 | tgtcctaatc | gtctcgctcc | atacatccgc | cacgatgtct | caagaacttc | accaccggat | 3540 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | actacggcta | cactagaagg | acagtatttg | gtatctgcgc | tctgctgaag | ccagttacct | 3600 |
| 3541 | tgatgccgat | gtgatcttcc | tgtcataaac | catagacgcg | agacgacttc | ggtcaatgga | 3600 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | tcggaaaaag | agttggtagc | tcttgatccg | gcaaacaaac | caccgctggt | agcggtggtt | 3660 |
| 3601 | agcctttttc | tcaaccatcg | agaactaggc | cgtttgtttg | gtggcgacca | tcgccaccaa | 3660 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | tttttgtttg | caagcagcag | attacgcgca | gaaaaaaagg | atctcaagaa | gatcctttga | 3720 |
| 3661 | aaaaacaaac | gttcgtcgtc | taatgcgcgt | ctttttttcc | tagagttctt | ctaggaaact | 3720 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | tcttttctac | ggggtctgac | gctcagtgga | acgaaaactc | acgttaaggg | attttggtca | 3780 |
| 3721 | agaaaagatg | ccccagactg | cgagtcacct | tgcttttgag | tgcaattccc | taaaaccagt | 3780 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | tgagattatc | aaaaaggatc | ttcacctaga | tccttttaaa | ttaaaaatga | agttttaaat | 3840 |
| 3781 | actctaatag | tttttcctag | aagtggatct | aggaaaattt | aatttttact | tcaaaattta | 3840 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | caatctaaag | tatatatgag | taaacttggt | ctgacagtta | ccaatgctta | atcagtgagg | 3900 |
| 3841 | gttagatttc | atatatactc | atttgaacca | gactgtcaat | ggttacgaat | tagtcactcc | 3900 |
| .......... | .......... | .......... | ....... | ORF 2 Ampicillin | ....... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | cacctatctc | agcgatctgt | ctatttcgtt | catccatagt | tgcctgactc | cccgtcgtgt | 3960 |
| 3901 | gtggatagag | tcgctagaca | gataaagcaa | gtaggtatca | acggactgag | gggcagcaca | 3960 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | agataactac | gatacgggag | ggcttaccat | ctggccccag | tgctgcaatg | ataccgcgag | 4020 |
| 3961 | tctattgatg | ctatgccctc | ccgaatggta | gaccggggtc | acgacgttac | tatggcgctc | 4020 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4021 | acccacgctc | accggctcca | gatttatcag | caataaacca | gccagccgga | agggccgagc | 4080 |
| 4021 | tgggtgcgag | tggccgaggt | ctaaatagtc | gttatttggt | cggtcggcct | tcccggctcg | 4080 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | gcagaagtgg | tcctgcaact | ttatccgcct | ccatccagtc | tattaattgt | tgccgggaag | 4140 |
| 4081 | cgtcttcacc | aggacgttga | aataggcgga | ggtaggtcag | ataattaaca | acggcccttc | 4140 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | FspI(4173) | .......... | .......... |
| 4141 | ctagagtaag | tagttcgcca | gttaatagtt | tgcgcaacgt | tgttgccatt | gctacaggca | 4200 |
| 4141 | gatctcattc | atcaagcggt | caattatcaa | acgcgttgca | acaacggtaa | cgatgtccgt | 4200 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | tcgtggtgtc | acgctcgtcg | tttggtatgg | cttcattcag | ctccggttcc | caacgatcaa | 4260 |
| 4201 | agcaccacag | tgcgagcagc | aaaccatacc | gaagtaagtc | gaggccaagg | gttgctagtt | 4260 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | ggcgagttac | atgatccccc | atgttgtgca | aaaaagcggt | tagctccttc | ggtcctccga | 4320 |
| 4261 | ccgctcaatg | tactaggggg | tacaacacgt | tttttcgcca | atcgaggaag | ccaggaggct | 4320 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | tcgttgtcag | aagtaagttg | gccgcagtgt | tatcactcat | ggttatggca | gcactgcata | 4380 |
| 4321 | agcaacagtc | ttcattcaac | cggcgtcaca | atagtgagta | ccaataccgt | cgtgacgtat | 4380 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | attctcttac | tgtcatgcca | tccgtaagat | gcttttctgt | gactggtgag | tactcaacca | 4440 |
| 4381 | taagagaatg | acagtacggt | aggcattcta | cgaaaagaca | ctgaccactc | atgagttggt | 4440 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | agtcattctg | agaatagtgt | atgcggcgac | cgagttgctc | ttgcccggcg | tcaatacggg | 4500 |
| 4441 | tcagtaagac | tcttatcaca | tacgccgctg | gctcaacgag | aacgggccgc | agttatgccc | 4500 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4501 | ataataccgc | gccacatagc | agaactttaa | aagtgctcat | cattggaaaa | cgttcttcgg | 4560 |
| 4501 | tattatggcg | cggtgtatcg | tcttgaaatt | ttcacgagta | gtaacctttt | gcaagaagcc | 4560 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4561 | ggcgaaaact | ctcaaggatc | ttaccgctgt | tgagatccag | ttcgatgtaa | cccactcgtg | 4620 |
| 4561 | ccgcttttga | gagttcctag | aatggcgaca | actctaggtc | aagctacatt | gggtgagcac | 4620 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4621 | cacccaactg | atcttcagca | tcttttactt | tcaccagcgt | ttctgggtga | gcaaaaacag | 4680 |
| 4621 | gtgggttgac | tagaagtcgt | agaaaatgaa | agtggtcgca | aagacccact | cgtttttgtc | 4680 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4681 | gaaggcaaaa | tgccgcaaaa | aagggaataa | gggcgacacg | gaaatgttga | atactcatac | 4740 |
| 4681 | cttccgtttt | acggcgtttt | ttcccttatt | cccgctgtgc | ctttacaact | tatgagtatg | 4740 |
| .......... | ....... | ORF 2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4741 | tcttcctttt | tcaatattat | tgaagcattt | atcagggtta | ttgtctcatg | agcggataca | 4800 |
| 4741 | agaaggaaaa | agttataata | acttcgtaaa | tagtcccaat | aacagagtac | tcgcctatgt | 4800 |
| .......... | .......... | .......... | .......... | AmpR_pro | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4801 | tatttgaatg | tatttagaaa | aataaacaaa | taggggttcc | gcgcacattt | ccccgaaaag | 4860 |
| 4801 | ataaacttac | ataaatcttt | ttatttgttt | atccccaagg | cgcgtgtaaa | ggggcttttc | 4860 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4861 | tgccacctga | cgtc...... | .......... | .......... | .......... | .......... | 4874 |
| 4861 | acggtggact | gcag...... | .......... | .......... | .......... | .......... | 4874 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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