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This sequnce graph is created using BVTech Plasmid, which is DNA sequence analysis and plasmid drawing software for Windows PCs.You can
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Sequence of pLB
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and then use BVTech Plasmid to view and edit the file.
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View the plasmid map on line
Sequence of pLB
: 8831 BP; 2337 A; 2057 C; 2112 G; 2325 T; 0 other; |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1 | gtcgacggat | cgggagatct | cccgatcccc | tatggtgcac | tctcagtaca | atctgctctg | 60 |
| 1 | cagctgccta | gccctctaga | gggctagggg | ataccacgtg | agagtcatgt | tagacgagac | 60 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | atgccgcata | gttaagccag | tatctgctcc | ctgcttgtgt | gttggaggtc | gctgagtagt | 120 |
| 61 | tacggcgtat | caattcggtc | atagacgagg | gacgaacaca | caacctccag | cgactcatca | 120 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | gcgcgagcaa | aatttaagct | acaacaaggc | aaggcttgac | cgacaattgc | atgaagaatc | 180 |
| 121 | cgcgctcgtt | ttaaattcga | tgttgttccg | ttccgaactg | gctgttaacg | tacttcttag | 180 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 181 | tgcttagggt | taggcgtttt | gcgctgcttc | gcgatgtacg | ggccagatat | acgcgttgac | 240 |
| 181 | acgaatccca | atccgcaaaa | cgcgacgaag | cgctacatgc | ccggtctata | tgcgcaactg | 240 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | SpeI(252) | .......... | .......... | .......... | .......... |
| 241 | attgattatt | gactagttat | taatagtaat | caattacggg | gtcattagtt | catagcccat | 300 |
| 241 | taactaataa | ctgatcaata | attatcatta | gttaatgccc | cagtaatcaa | gtatcgggta | 300 |
| .......... | ......... | CMV_imm_pro | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | atatggagtt | ccgcgttaca | taacttacgg | taaatggccc | gcctggctga | ccgcccaacg | 360 |
| 301 | tatacctcaa | ggcgcaatgt | attgaatgcc | atttaccggg | cggaccgact | ggcgggttgc | 360 |
| .......... | ......... | CMV_imm_pro | CAG_enh | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | acccccgccc | attgacgtca | ataatgacgt | atgttcccat | agtaacgcca | atagggactt | 420 |
| 361 | tgggggcggg | taactgcagt | tattactgca | tacaagggta | tcattgcggt | tatccctgaa | 420 |
| .......... | ..... | CAG_enh CMV_imm_pro | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | tccattgacg | tcaatgggtg | gagtatttac | ggtaaactgc | ccacttggca | gtacatcaag | 480 |
| 421 | aggtaactgc | agttacccac | ctcataaatg | ccatttgacg | ggtgaaccgt | catgtagttc | 480 |
| .......... | ..... | CAG_enh CMV_imm_pro | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | tgtatcatat | gccaagtacg | ccccctattg | acgtcaatga | cggtaaatgg | cccgcctggc | 540 |
| 481 | acatagtata | cggttcatgc | gggggataac | tgcagttact | gccatttacc | gggcggaccg | 540 |
| .......... | ..... | CAG_enh CMV_imm_pro | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 541 | attatgccca | gtacatgacc | ttatgggact | ttcctacttg | gcagtacatc | tacgtattag | 600 |
| 541 | taatacgggt | catgtactgg | aataccctga | aaggatgaac | cgtcatgtag | atgcataatc | 600 |
| .......... | ..... | CAG_enh CMV_imm_pro | ..... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 601 | tcatcgctat | taccatggtg | atgcggtttt | ggcagtacat | caatgggcgt | ggatagcggt | 660 |
| 601 | agtagcgata | atggtaccac | tacgccaaaa | ccgtcatgta | gttacccgca | cctatcgcca | 660 |
| .......... | ......... | CMV_imm_pro | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 661 | ttgactcacg | gggatttcca | agtctccacc | ccattgacgt | caatgggagt | ttgttttggc | 720 |
| 661 | aactgagtgc | ccctaaaggt | tcagaggtgg | ggtaactgca | gttaccctca | aacaaaaccg | 720 |
| .......... | ......... | CMV_imm_pro | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | accaaaatca | acgggacttt | ccaaaatgtc | gtaacaactc | cgccccattg | acgcaaatgg | 780 |
| 721 | tggttttagt | tgccctgaaa | ggttttacag | cattgttgag | gcggggtaac | tgcgtttacc | 780 |
| .......... | ......... | CMV_imm_pro | CMV_f_pri | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 781 | gcggtaggcg | tgtacggtgg | gaggtctata | taagcagcgc | gttttgcctg | tactgggtct | 840 |
| 781 | cgccatccgc | acatgccacc | ctccagatat | attcgtcgcg | caaaacggac | atgacccaga | 840 |
| CMV_f_pri | CMV_imm_pro | ........ | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | ctctggttag | accagatctg | agcctgggag | ctctctggct | aactagggaa | cccactgctt | 900 |
| 841 | gagaccaatc | tggtctagac | tcggaccctc | gagagaccga | ttgatccctt |
gggtgacgaa | 900 |
| .......... | ......... | HIV truncHIV | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | aagcctcaat | aaagcttgcc | ttgagtgctt | caagtagtgt | gtgcccgtct | gttgtgtgac | 960 |
| 901 | ttcggagtta | tttcgaacgg | aactcacgaa | gttcatcaca | cacgggcaga |
caacacactg | 960 |
| .......... | ......... | HIV truncHIV | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | NarI(1019) |
| 961 | tctggtaact | agagatccct | cagacccttt | tagtcagtgt | ggaaaatctc | tagcagtggc | 1020 |
| 961 | agaccattga | tctctaggga | gtctgggaaa | atcagtcaca | ccttttagag |
atcgtcaccg | 1020 |
| .......... | ......... | HIV truncHIV | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1021 | gcccgaacag | ggacttgaaa | gcgaaaggga | aaccagagga | gctctctcga | cgcaggactc | 1080 |
| 1021 | cgggcttgtc | cctgaacttt | cgctttccct | ttggtctcct | cgagagagct | gcgtcctgag | 1080 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1081 | ggcttgctga | agcgcgcacg | gcaagaggcg | aggggcggcg | actggtgagt | acgccaaaaa | 1140 |
| 1081 | ccgaacgact | tcgcgcgtgc | cgttctccgc | tccccgccgc | tgaccactca | tgcggttttt | 1140 |
| .......... | .......... | .......... | ........ | HIV-1_psi_pack | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | ttttgactag | cggaggctag | aaggagagag | atgggtgcga | gagcgtcagt | attaagcggg | 1200 |
| 1141 | aaaactgatc | gcctccgatc | ttcctctctc | tacccacgct | ctcgcagtca | taattcgccc | 1200 |
| ........ | HIV-1_psi_pack | ........ | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | ggagaattag | atcgcgatgg | gaaaaaattc | ggttaaggcc | agggggaaag | aaaaaatata | 1260 |
| 1201 | cctcttaatc | tagcgctacc | cttttttaag | ccaattccgg | tccccctttc | ttttttatat | 1260 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1261 | aattaaaaca | tatagtatgg | gcaagcaggg | agctagaacg | attcgcagtt | aatcctggcc | 1320 |
| 1261 | ttaattttgt | atatcatacc | cgttcgtccc | tcgatcttgc | taagcgtcaa | ttaggaccgg | 1320 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1321 | tgttagaaac | atcagaaggc | tgtagacaaa | tactgggaca | gctacaacca | tcccttcaga | 1380 |
| 1321 | acaatctttg | tagtcttccg | acatctgttt | atgaccctgt | cgatgttggt | agggaagtct | 1380 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1381 | caggatcaga | agaacttaga | tcattatata | atacagtagc | aaccctctat | tgtgtgcatc | 1440 |
| 1381 | gtcctagtct | tcttgaatct | agtaatatat | tatgtcatcg | ttgggagata | acacacgtag | 1440 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1441 | aaaggataga | gataaaagac | accaaggaag | ctttagacaa | gatagaggaa | gagcaaaaca | 1500 |
| 1441 | tttcctatct | ctattttctg | tggttccttc | gaaatctgtt | ctatctcctt | ctcgttttgt | 1500 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | aaagtaagac | caccgcacag | caagcggccg | gccgcgctga | tcttcagacc | tggaggagga | 1560 |
| 1501 | tttcattctg | gtggcgtgtc | gttcgccggc | cggcgcgact | agaagtctgg | acctcctcct | 1560 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1561 | gatatgaggg | acaattggag | aagtgaatta | tataaatata | aagtagtaaa | aattgaacca | 1620 |
| 1561 | ctatactccc | tgttaacctc | ttcacttaat | atatttatat | ttcatcattt | ttaacttggt | 1620 |
| .......... | .......... | .......... | ORF1 | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1621 | ttaggagtag | cacccaccaa | ggcaaagaga | agagtggtgc | agagagaaaa | aagagcagtg | 1680 |
| 1621 | aatcctcatc | gtgggtggtt | ccgtttctct | tctcaccacg | tctctctttt | ttctcgtcac | 1680 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1681 | ggaataggag | ctttgttcct | tgggttcttg | ggagcagcag | gaagcactat | gggcgcagcg | 1740 |
| 1681 | ccttatcctc | gaaacaagga | acccaagaac | cctcgtcgtc | cttcgtgata | cccgcgtcgc | 1740 |
| .......... | .......... | ORF1 | RRE | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | tcaatgacgc | tgacggtaca | ggccagacaa | ttattgtctg | gtatagtgca | gcagcagaac | 1800 |
| 1741 | agttactgcg | actgccatgt | ccggtctgtt | aataacagac | catatcacgt | cgtcgtcttg | 1800 |
| .......... | .......... | ORF1 RRE | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | aatttgctga | gggctattga | ggcgcaacag | catctgttgc | aactcacagt | ctggggcatc | 1860 |
| 1801 | ttaaacgact | cccgataact | ccgcgttgtc | gtagacaacg | ttgagtgtca | gaccccgtag | 1860 |
| .......... | .......... | ORF1 RRE | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1861 | aagcagctcc | aggcaagaat | cctggctgtg | gaaagatacc | taaaggatca | acagctcctg | 1920 |
| 1861 | ttcgtcgagg | tccgttctta | ggaccgacac | ctttctatgg | atttcctagt | tgtcgaggac | 1920 |
| .......... | .......... | ORF1 RRE | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | gggatttggg | gttgctctgg | aaaactcatt | tgcaccactg | ctgtgccttg | gaatgctagt | 1980 |
| 1921 | ccctaaaccc | caacgagacc | ttttgagtaa | acgtggtgac | gacacggaac | cttacgatca | 1980 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | tggagtaata | aatctctgga | acagatttgg | aatcacacga | cctggatgga | gtgggacaga | 2040 |
| 1981 | acctcattat | ttagagacct | tgtctaaacc | ttagtgtgct | ggacctacct | caccctgtct | 2040 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | gaaattaaca | attacacaag | cttaatacac | tccttaattg | aagaatcgca | aaaccagcaa | 2100 |
| 2041 | ctttaattgt | taatgtgttc | gaattatgtg | aggaattaac | ttcttagcgt | tttggtcgtt | 2100 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | gaaaagaatg | aacaagaatt | attggaatta | gataaatggg | caagtttgtg | gaattggttt | 2160 |
| 2101 | cttttcttac | ttgttcttaa | taaccttaat | ctatttaccc | gttcaaacac | cttaaccaaa | 2160 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | aacataacaa | attggctgtg | gtatataaaa | ttattcataa | tgatagtagg | aggcttggta | 2220 |
| 2161 | ttgtattgtt | taaccgacac | catatatttt | aataagtatt | actatcatcc | tccgaaccat | 2220 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | ggtttaagaa | tagtttttgc | tgtactttct | atagtgaata | gagttaggca | gggatattca | 2280 |
| 2221 | ccaaattctt | atcaaaaacg | acatgaaaga | tatcacttat | ctcaatccgt | ccctataagt | 2280 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | ccattatcgt | ttcagaccca | cctcccaacc | ccgaggggac | ccgacaggcc | cgaaggaata | 2340 |
| 2281 | ggtaatagca | aagtctgggt | ggagggttgg | ggctcccctg | ggctgtccgg | gcttccttat | 2340 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | gaagaagaag | gtggagagag | agacagagac | agatccattc | gattagtgaa | cggatcggca | 2400 |
| 2341 | cttcttcttc | cacctctctc | tctgtctctg | tctaggtaag | ctaatcactt | gcctagccgt | 2400 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | PstI(2420) | .......... | .......... | .......... | .......... |
| 2401 | ctgcgtgcgc | caattctgca | gacaaatggc | agtattcatc | cacaatttta | aaagaaaagg | 2460 |
| 2401 | gacgcacgcg | gttaagacgt | ctgtttaccg | tcataagtag | gtgttaaaat | tttcttttcc | 2460 |
| .......... | .......... | ORF1 | .......... | .......... | cPPT |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | ggggattggg | gggtacagtg | caggggaaag | aatagtagac | ataatagcaa | cagacataca | 2520 |
| 2461 | cccctaaccc | cccatgtcac | gtcccctttc | ttatcatctg | tattatcgtt | gtctgtatgt | 2520 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2521 | aactaaagaa | ttacaaaaac | aaattacaaa | aattcaaaat | tttcgggttt | attacaggga | 2580 |
| 2521 | ttgatttctt | aatgtttttg | tttaatgttt | ttaagtttta | aaagcccaaa | taatgtccct | 2580 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | cagcagagat | ccagtttggt | tagtaccggg | cccggtgctt | tgctctgagc | cagcccacca | 2640 |
| 2581 | gtcgtctcta | ggtcaaacca | atcatggccc | gggccacgaa | acgagactcg | gtcgggtggt | 2640 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | gtttggaatg | actccttttt | atgacttgaa | ttttcaagta | taaagtctag | tgctaaattt | 2700 |
| 2641 | caaaccttac | tgaggaaaaa | tactgaactt | aaaagttcat | atttcagatc | acgatttaaa | 2700 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | aatttgaaca | actgtatagt | ttttgctggt | tgggggaagg | aaaaaaaatg | gtggcagtgt | 2760 |
| 2701 | ttaaacttgt | tgacatatca | aaaacgacca | acccccttcc | ttttttttac | caccgtcaca | 2760 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2761 | ttttttcaga | attagaagtg | aaatgaaaat | tgttgtgtgt | gaggatttct | aatgacatgt | 2820 |
| 2761 | aaaaaagtct | taatcttcac | tttactttta | acaacacaca | ctcctaaaga | ttactgtaca | 2820 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2821 | ggtggttgca | tactgagtga | agccggtgag | cattctgcca | tgtcaccccc | tcgtgctcag | 2880 |
| 2821 | ccaccaacgt | atgactcact | tcggccactc | gtaagacggt | acagtggggg | agcacgagtc | 2880 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2881 | taatgtactt | tacagaaatc | ctaaactcaa | aagattgata | taaaccatgc | ttcttgtgta | 2940 |
| 2881 | attacatgaa | atgtctttag | gatttgagtt | ttctaactat | atttggtacg | aagaacacat | 2940 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | XbaI(2997) |
| 2941 | tatccggtct | cttctctggg | tagtctcact | cagcctgcat | ttctgccagg | gcccgctcta | 3000 |
| 2941 | ataggccaga | gaagagaccc | atcagagtga | gtcggacgta | aagacggtcc | cgggcgagat | 3000 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | gagatccgac | gccgccatct | ctaggcccgc | gccggccccc | tcgcacagac | ttgtgggaga | 3060 |
| 3001 | ctctaggctg | cggcggtaga | gatccgggcg | cggccggggg | agcgtgtctg | aacaccctct | 3060 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | agctcggcta | ctcccctgcc | ccggttaatt | tgcatataat | atttcctagt | aactatagag | 3120 |
| 3061 | tcgagccgat | gaggggacgg | ggccaattaa | acgtatatta | taaaggatca | ttgatatctc | 3120 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | gcttaatgtg | cgataaaaga | cagataatct | gttcttttta | atactagcta | cattttacat | 3180 |
| 3121 | cgaattacac | gctattttct | gtctattaga | caagaaaaat | tatgatcgat | gtaaaatgta | 3180 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | gataggcttg | gatttctata | agagatacaa | atactaaatt | attattttaa | aaaacagcac | 3240 |
| 3181 | ctatccgaac | ctaaagatat | tctctatgtt | tatgatttaa | taataaaatt | ttttgtcgtg | 3240 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | aaaaggaaac | tcaccctaac | tgtaaagtaa | ttgtgtgttt | tgagactata | aatatccctt | 3300 |
| 3241 | ttttcctttg | agtgggattg | acatttcatt | aacacacaaa | actctgatat | ttatagggaa | 3300 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | HpaI(3316) | .......... | .......... | .......... | .......... |
| 3301 | ggagaaaagc | cttgttaacg | cgcggtgacc | ctcgaggtcg | acggtatcga | taagctcgct | 3360 |
| 3301 | cctcttttcg | gaacaattgc | gcgccactgg | gagctccagc | tgccatagct | attcgagcga | 3360 |
| .......... | .......... | ......... | pBluesKS_pri | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | tcacgagatt | ccagcaggtc | gagggaccta | ataacttcgt | atagcataca | ttatacgaag | 3420 |
| 3361 | agtgctctaa | ggtcgtccag | ctccctggat | tattgaagca | tatcgtatgt | aatatgcttc | 3420 |
| .......... | .......... | .......... | .......... | loxP | .......... |
| .......... | .......... | NotI(3446) | .......... | .......... | .......... |
| 3421 | ttatattaag | ggttccaagc | ttaagcggcc | gcgtggataa | ccgtattacc | gccatgcatt | 3480 |
| 3421 | aatataattc | ccaaggttcg | aattcgccgg | cgcacctatt | ggcataatgg | cggtacgtaa | 3480 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | agttattaat | agtaatcaat | tacggggtca | ttagttcata | gcccatatat | ggagttccgc | 3540 |
| 3481 | tcaataatta | tcattagtta | atgccccagt | aatcaagtat | cgggtatata | cctcaaggcg | 3540 |
| .......... | .......... | ......... | CMV_imm_pro | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | gttacataac | ttacggtaaa | tggcccgcct | ggctgaccgc | ccaacgaccc | ccgcccattg | 3600 |
| 3541 | caatgtattg | aatgccattt | accgggcgga | ccgactggcg | ggttgctggg | ggcgggtaac | 3600 |
| .......... | ......... | CMV_imm_pro | CAG_en | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | acgtcaataa | tgacgtatgt | tcccatagta | acgccaatag | ggactttcca | ttgacgtcaa | 3660 |
| 3601 | tgcagttatt | actgcataca | agggtatcat | tgcggttatc | cctgaaaggt | aactgcagtt | 3660 |
| .......... | ...... | CMV_imm_pro CAG_en | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | tgggtggagt | atttacggta | aactgcccac | ttggcagtac | atcaagtgta | tcatatgcca | 3720 |
| 3661 | acccacctca | taaatgccat | ttgacgggtg | aaccgtcatg | tagttcacat | agtatacggt | 3720 |
| .......... | ...... | CMV_imm_pro CAG_en | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | agtacgcccc | ctattgacgt | caatgacggt | aaatggcccg | cctggcatta | tgcccagtac | 3780 |
| 3721 | tcatgcgggg | gataactgca | gttactgcca | tttaccgggc | ggaccgtaat | acgggtcatg | 3780 |
| .......... | ...... | CMV_imm_pro CAG_en | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | atgaccttat | gggactttcc | tacttggcag | tacatctacg | tattagtcat | cgctattacc | 3840 |
| 3781 | tactggaata | ccctgaaagg | atgaaccgtc | atgtagatgc | ataatcagta | gcgataatgg | 3840 |
| .......... | ...... | CMV_imm_pro CAG_en | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | atggtgatgc | ggttttggca | gtacatcaat | gggcgtggat | agcggtttga | ctcacgggga | 3900 |
| 3841 | taccactacg | ccaaaaccgt | catgtagtta | cccgcaccta | tcgccaaact | gagtgcccct | 3900 |
| .......... | ......... | CMV_imm_pro | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | tttccaagtc | tccaccccat | tgacgtcaat | gggagtttgt | tttggcacca | aaatcaacgg | 3960 |
| 3901 | aaaggttcag | aggtggggta | actgcagtta | ccctcaaaca | aaaccgtggt | tttagttgcc | 3960 |
| .......... | ......... | CMV_imm_pro | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | gactttccaa | aatgtcgtaa | caactccgcc | ccattgacgc | aaatgggcgg | taggcgtgta | 4020 |
| 3961 | ctgaaaggtt | ttacagcatt | gttgaggcgg | ggtaactgcg | tttacccgcc | atccgcacat | 4020 |
| .......... | ......... | CMV_imm_pro | ..... | CMV_f_pri CMV_pro | ...... |
| .......... | .......... | .......... | .......... | NheI(4070) | AgeI(4079) |
| 4021 | cggtgggagg | tctatataag | cagagctggt | ttagtgaacc | gtcagatccg | ctagcgctac | 4080 |
| 4021 | gccaccctcc | agatatattc | gtctcgacca | aatcacttgg | cagtctaggc | gatcgcgatg | 4080 |
| CMV_f_pri | CMV_imm_pro | CMV_pro | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | cggtcgccac | catggtgagc | aagggcgagg | agctgttcac | cggggtggtg | cccatcctgg | 4140 |
| 4081 | gccagcggtg | gtaccactcg | ttcccgctcc | tcgacaagtg | gccccaccac | gggtaggacc | 4140 |
| .......... | .......... | ORF3 | EGFP ORF3 | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | tcgagctgga | cggcgacgta | aacggccaca | agttcagcgt | gtccggcgag | ggcgagggcg | 4200 |
| 4141 | agctcgacct | gccgctgcat | ttgccggtgt | tcaagtcgca | caggccgctc | ccgctcccgc | 4200 |
| EGFP_N_pri | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | atgccaccta | cggcaagctg | accctgaagt | tcatctgcac | caccggcaag | ctgcccgtgc | 4260 |
| 4201 | tacggtggat | gccgttcgac | tgggacttca | agtagacgtg | gtggccgttc | gacgggcacg | 4260 |
| .......... | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | cctggcccac | cctcgtgacc | accctgacct | acggcgtgca | gtgcttcagc | cgctaccccg | 4320 |
| 4261 | ggaccgggtg | ggagcactgg | tgggactgga | tgccgcacgt | cacgaagtcg | gcgatggggc | 4320 |
| .......... | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | accacatgaa | gcagcacgac | ttcttcaagt | ccgccatgcc | cgaaggctac | gtccaggagc | 4380 |
| 4321 | tggtgtactt | cgtcgtgctg | aagaagttca | ggcggtacgg | gcttccgatg | caggtcctcg | 4380 |
| .......... | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | gcaccatctt | cttcaaggac | gacggcaact | acaagacccg | cgccgaggtg | aagttcgagg | 4440 |
| 4381 | cgtggtagaa | gaagttcctg | ctgccgttga | tgttctgggc | gcggctccac | ttcaagctcc | 4440 |
| .......... | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | gcgacaccct | ggtgaaccgc | atcgagctga | agggcatcga | cttcaaggag | gacggcaaca | 4500 |
| 4441 | cgctgtggga | ccacttggcg | tagctcgact | tcccgtagct | gaagttcctc | ctgccgttgt | 4500 |
| .......... | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4501 | tcctggggca | caagctggag | tacaactaca | acagccacaa | cgtctatatc | atggccgaca | 4560 |
| 4501 | aggaccccgt | gttcgacctc | atgttgatgt | tgtcggtgtt | gcagatatag | taccggctgt | 4560 |
| .......... | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4561 | agcagaagaa | cggcatcaag | gtgaacttca | agatccgcca | caacatcgag | gacggcagcg | 4620 |
| 4561 | tcgtcttctt | gccgtagttc | cacttgaagt | tctaggcggt | gttgtagctc | ctgccgtcgc | 4620 |
| .......... | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4621 | tgcagctcgc | cgaccactac | cagcagaaca | cccccatcgg | cgacggcccc | gtgctgctgc | 4680 |
| 4621 | acgtcgagcg | gctggtgatg | gtcgtcttgt | gggggtagcc | gctgccgggg | cacgacgacg | 4680 |
| .......... | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4681 | ccgacaacca | ctacctgagc | acccagtccg | ccctgagcaa | agaccccaac | gagaagcgcg | 4740 |
| 4681 | ggctgttggt | gatggactcg | tgggtcaggc | gggactcgtt | tctggggttg | ctcttcgcgc | 4740 |
| .......... | ........ | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4741 | atcacatggt | cctgctggag | ttcgtgaccg | ccgccgggat | cactctcggc | atggacgagc | 4800 |
| 4741 | tagtgtacca | ggacgacctc | aagcactggc | ggcggcccta | gtgagagccg | tacctgctcg | 4800 |
| ........ | EGFP_C_pri | ORF3 EGFP ORF3 | ........ | .......... | .......... |
| ......... | EcoRI(4812) | ......... | .......... | .......... | .......... |
| 4801 | tgtacaagta | ggaattcgtc | gagggaccta | ataacttcgt | atagcataca | ttatacgaag | 4860 |
| 4801 | acatgttcat | ccttaagcag | ctccctggat | tattgaagca | tatcgtatgt | aatatgcttc | 4860 |
| ORF3 | .......... | ORF3 | .......... | loxP | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4861 | ttatacatgt | ttaagggttc | cggttccact | aggtacaatt | cgatatcaag | cttatcgata | 4920 |
| 4861 | aatatgtaca | aattcccaag | gccaaggtga | tccatgttaa | gctatagttc | gaatagctat | 4920 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4921 | atcaacctct | ggattacaaa | atttgtgaaa | gattgactgg | tattcttaac | tatgttgctc | 4980 |
| 4921 | tagttggaga | cctaatgttt | taaacacttt | ctaactgacc | ataagaattg | atacaacgag | 4980 |
| .......... | .......... | .......... | WPRE | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4981 | cttttacgct | atgtggatac | gctgctttaa | tgcctttgta | tcatgctatt | gcttcccgta | 5040 |
| 4981 | gaaaatgcga | tacacctatg | cgacgaaatt | acggaaacat | agtacgataa | cgaagggcat | 5040 |
| .......... | .......... | WPRE | .......... | .......... | ORF1 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5041 | tggctttcat | tttctcctcc | ttgtataaat | cctggttgct | gtctctttat | gaggagttgt | 5100 |
| 5041 | accgaaagta | aaagaggagg | aacatattta | ggaccaacga | cagagaaata | ctcctcaaca | 5100 |
| .......... | .......... | WPRE ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5101 | ggcccgttgt | caggcaacgt | ggcgtggtgt | gcactgtgtt | tgctgacgca | acccccactg | 5160 |
| 5101 | ccgggcaaca | gtccgttgca | ccgcaccaca | cgtgacacaa | acgactgcgt | tgggggtgac | 5160 |
| .......... | .......... | WPRE ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5161 | gttggggcat | tgccaccacc | tgtcagctcc | tttccgggac | tttcgctttc | cccctcccta | 5220 |
| 5161 | caaccccgta | acggtggtgg | acagtcgagg | aaaggccctg | aaagcgaaag | ggggagggat | 5220 |
| .......... | .......... | WPRE ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5221 | ttgccacggc | ggaactcatc | gccgcctgcc | ttgcccgctg | ctggacaggg | gctcggctgt | 5280 |
| 5221 | aacggtgccg | ccttgagtag | cggcggacgg | aacgggcgac | gacctgtccc | cgagccgaca | 5280 |
| .......... | .......... | WPRE ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5281 | tgggcactga | caattccgtg | gtgttgtcgg | ggaaatcatc | gtcctttcct | tggctgctcg | 5340 |
| 5281 | acccgtgact | gttaaggcac | cacaacagcc | cctttagtag | caggaaagga | accgacgagc | 5340 |
| .......... | .......... | WPRE ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5341 | cctgtgttgc | cacctggatt | ctgcgcggga | cgtccttctg | ctacgtccct | tcggccctca | 5400 |
| 5341 | ggacacaacg | gtggacctaa | gacgcgccct | gcaggaagac | gatgcaggga | agccgggagt | 5400 |
| .......... | .......... | WPRE ORF1 | .......... | .......... | .......... |
| .......... | ......... | SacII(5423) | ......... | .......... | .......... |
| 5401 | atccagcgga | ccttccttcc | cgcggcctgc | tgccggctct | gcggcctctt | ccgcgtcttc | 5460 |
| 5401 | taggtcgcct | ggaaggaagg | gcgccggacg | acggccgaga | cgccggagaa | ggcgcagaag | 5460 |
| .......... | .......... | WPRE ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5461 | gccttcgccc | tcagacgagt | cggatctccc | tttgggccgc | ctccccgcat | cgataccgtc | 5520 |
| 5461 | cggaagcggg | agtctgctca | gcctagaggg | aaacccggcg | gaggggcgta | gctatggcag | 5520 |
| .......... | .......... | WPRE ORF1 | .......... | ......... | pBluesKS_pri |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5521 | gacctcgatc | gagacctaga | aaaacatgga | gcaatcacaa | gtagcaatac | agcagctacc | 5580 |
| 5521 | ctggagctag | ctctggatct | ttttgtacct | cgttagtgtt | catcgttatg | tcgtcgatgg | 5580 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5581 | aatgctgatt | gtgcctggct | agaagcacaa | gaggaggagg | aggtgggttt | tccagtcaca | 5640 |
| 5581 | ttacgactaa | cacggaccga | tcttcgtgtt | ctcctcctcc | tccacccaaa | aggtcagtgt | 5640 |
| .......... | .......... | ORF1 | .......... | .......... | .......... |
| KpnI(5650) | .......... | .......... | .......... | .......... | .......... |
| 5641 | cctcaggtac | caagcatggg | gtaaagtact | gttctcatca | catcatatca | aggttatata | 5700 |
| 5641 | ggagtccatg | gttcgtaccc | catttcatga | caagagtagt | gtagtatagt | tccaatatat | 5700 |
| .......... | ORF1 | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5701 | ccatcaatat | tgccacagat | gttacttagc | cttttaatat | ttctctaatt | tagtgtatat | 5760 |
| 5701 | ggtagttata | acggtgtcta | caatgaatcg | gaaaattata | aagagattaa | atcacatata | 5760 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5761 | gcaatgatag | ttctctgatt | tctgagattg | agtttctcat | gtgtaatgat | tatttagagt | 5820 |
| 5761 | cgttactatc | aagagactaa | agactctaac | tcaaagagta | cacattacta | ataaatctca | 5820 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5821 | ttctctttca | tctgttcaaa | tttttgtcta | gttttatttt | ttactgattt | gtaagacttc | 5880 |
| 5821 | aagagaaagt | agacaagttt | aaaaacagat | caaaataaaa | aatgactaaa | cattctgaag | 5880 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5881 | tttttataat | ctgcatatta | caattctctt | tactggggtg | ttgcaaatat | tttctgtcat | 5940 |
| 5881 | aaaaatatta | gacgtataat | gttaagagaa | atgaccccac | aacgtttata | aaagacagta | 5940 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5941 | tctatggcct | gacttttctt | aatggttttt | taattttaaa | aataagtctt | aatattcatg | 6000 |
| 5941 | agataccgga | ctgaaaagaa | ttaccaaaaa | attaaaattt | ttattcagaa | ttataagtac | 6000 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6001 | caatctaatt | aacaatcttt | tctttgtggt | taggactttg | agtcataaga | aatttttctc | 6060 |
| 6001 | gttagattaa | ttgttagaaa | agaaacacca | atcctgaaac | tcagtattct | ttaaaaagag | 6060 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6061 | tacactgaag | tcatgatggc | atgcttctat | attattttct | aaaagattta | aagttttgcc | 6120 |
| 6061 | atgtgacttc | agtactaccg | tacgaagata | taataaaaga | ttttctaaat | ttcaaaacgg | 6120 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6121 | ttctccattt | agacttataa | ttcactggaa | tttttttgtg | tgtatggtat | gacatatggg | 6180 |
| 6121 | aagaggtaaa | tctgaatatt | aagtgacctt | aaaaaaacac | acataccata | ctgtataccc | 6180 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6181 | ttccctttta | ttttttacat | ataaatatat | ttccctgttt | ttctaaaaaa | gaaaaagatc | 6240 |
| 6181 | aagggaaaat | aaaaaatgta | tatttatata | aagggacaaa | aagatttttt | ctttttctag | 6240 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6241 | atcattttcc | cattgtaaaa | tgccatattt | ttttcatagg | tcacttacat | atatcaatgg | 6300 |
| 6241 | tagtaaaagg | gtaacatttt | acggtataaa | aaaagtatcc | agtgaatgta | tatagttacc | 6300 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6301 | gtctgtttct | gagctctact | ctattttatc | agcctcactg | tctatcccca | cacatctcat | 6360 |
| 6301 | cagacaaaga | ctcgagatga | gataaaatag | tcggagtgac | agataggggt | gtgtagagta | 6360 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6361 | gctttgctct | aaatcttgat | atttagtgga | acattctttc | ccattttgtt | ctacaagaat | 6420 |
| 6361 | cgaaacgaga | tttagaacta | taaatcacct | tgtaagaaag | ggtaaaacaa | gatgttctta | 6420 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6421 | atttttgtta | ttgtcttttg | ggcttctata | tacattttag | aatgaggttg | gcaagttctg | 6480 |
| 6421 | taaaaacaat | aacagaaaac | ccgaagatat | atgtaaaatc | ttactccaac | cgttcaagac | 6480 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6481 | tagatcttag | ccacttttta | aaagaaaagg | ggggactgga | agggctaatt | cactcccaac | 6540 |
| 6481 | atctagaatc | ggtgaaaaat | tttcttttcc | cccctgacct | tcccgattaa | gtgagggttg | 6540 |
| .......... | .......... | cPPT U3PPT | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6541 | gaagacaaga | tatccttgat | ctgtggatct | accacacaca | aggctacttc | cctgattggc | 6600 |
| 6541 | cttctgttct | ataggaacta | gacacctaga | tggtgtgtgt | tccgatgaag | ggactaaccg | 6600 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6601 | agaactacac | accagggcca | gggatcagat | atccactgac | ctttggatgg | tgctacaagc | 6660 |
| 6601 | tcttgatgtg | tggtcccggt | ccctagtcta | taggtgactg | gaaacctacc | acgatgttcg | 6660 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6661 | tagtaccagt | tgagcaagag | aaggtagaag | aagccaatga | aggagagaac | acccgcttgt | 6720 |
| 6661 | atcatggtca | actcgttctc | ttccatcttc | ttcggttact | tcctctcttg | tgggcgaaca | 6720 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6721 | tacaccctgt | gagcctgcat | gggatggatg | acccggagag | agaagtatta | gagtggaggt | 6780 |
| 6721 | atgtgggaca | ctcggacgta | ccctacctac | tgggcctctc | tcttcataat | ctcacctcca | 6780 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6781 | ttgacagccg | cctagcattt | catcacatgg | cccgagagct | gcatccggac | tgtactgggt | 6840 |
| 6781 | aactgtcggc | ggatcgtaaa | gtagtgtacc | gggctctcga | cgtaggcctg | acatgaccca | 6840 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6841 | ctctctggtt | agaccagatc | tgagcctggg | agctctctgg | ctaactaggg | aacccactgc | 6900 |
| 6841 | gagagaccaa | tctggtctag | actcggaccc | tcgagagacc | gattgatccc | ttgggtgacg | 6900 |
| .......... | ......... | truncHIV HIV | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6901 | ttaagcctca | ataaagcttg | ccttgagtgc | ttcaagtagt | gtgtgcccgt | ctgttgtgtg | 6960 |
| 6901 | aattcggagt | tatttcgaac | ggaactcacg | aagttcatca | cacacgggca | gacaacacac | 6960 |
| .......... | ......... | truncHIV HIV | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6961 | actctggtaa | ctagagatcc | ctcagaccct | tttagtcagt | gtggaaaatc | tctagcagca | 7020 |
| 6961 | tgagaccatt | gatctctagg | gagtctggga | aaatcagtca | caccttttag | agatcgtcgt | 7020 |
| .......... | ......... | truncHIV HIV | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7021 | tgtgagcaaa | aggccagcaa | aaggccagga | accgtaaaaa | ggccgcgttg | ctggcgtttt | 7080 |
| 7021 | acactcgttt | tccggtcgtt | ttccggtcct | tggcattttt | ccggcgcaac | gaccgcaaaa | 7080 |
| .......... | .......... | .......... | .......... | ........ | pBR322_origin |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7081 | tccataggct | ccgcccccct | gacgagcatc | acaaaaatcg | acgctcaagt | cagaggtggc | 7140 |
| 7081 | aggtatccga | ggcgggggga | ctgctcgtag | tgtttttagc | tgcgagttca | gtctccaccg | 7140 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7141 | gaaacccgac | aggactataa | agataccagg | cgtttccccc | tggaagctcc | ctcgtgcgct | 7200 |
| 7141 | ctttgggctg | tcctgatatt | tctatggtcc | gcaaaggggg | accttcgagg | gagcacgcga | 7200 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7201 | ctcctgttcc | gaccctgccg | cttaccggat | acctgtccgc | ctttctccct | tcgggaagcg | 7260 |
| 7201 | gaggacaagg | ctgggacggc | gaatggccta | tggacaggcg | gaaagaggga | agcccttcgc | 7260 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7261 | tggcgctttc | tcatagctca | cgctgtaggt | atctcagttc | ggtgtaggtc | gttcgctcca | 7320 |
| 7261 | accgcgaaag | agtatcgagt | gcgacatcca | tagagtcaag | ccacatccag | caagcgaggt | 7320 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7321 | agctgggctg | tgtgcacgaa | ccccccgttc | agcccgaccg | ctgcgcctta | tccggtaact | 7380 |
| 7321 | tcgacccgac | acacgtgctt | ggggggcaag | tcgggctggc | gacgcggaat | aggccattga | 7380 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7381 | atcgtcttga | gtccaacccg | gtaagacacg | acttatcgcc | actggcagca | gccactggta | 7440 |
| 7381 | tagcagaact | caggttgggc | cattctgtgc | tgaatagcgg | tgaccgtcgt | cggtgaccat | 7440 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7441 | acaggattag | cagagcgagg | tatgtaggcg | gtgctacaga | gttcttgaag | tggtggccta | 7500 |
| 7441 | tgtcctaatc | gtctcgctcc | atacatccgc | cacgatgtct | caagaacttc | accaccggat | 7500 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7501 | actacggcta | cactagaaga | acagtatttg | gtatctgcgc | tctgctgaag | ccagttacct | 7560 |
| 7501 | tgatgccgat | gtgatcttct | tgtcataaac | catagacgcg | agacgacttc | ggtcaatgga | 7560 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7561 | tcggaaaaag | agttggtagc | tcttgatccg | gcaaacaaac | caccgctggt | agcggtggtt | 7620 |
| 7561 | agcctttttc | tcaaccatcg | agaactaggc | cgtttgtttg | gtggcgacca | tcgccaccaa | 7620 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7621 | tttttgtttg | caagcagcag | attacgcgca | gaaaaaaagg | atctcaagaa | gatcctttga | 7680 |
| 7621 | aaaaacaaac | gttcgtcgtc | taatgcgcgt | ctttttttcc | tagagttctt | ctaggaaact | 7680 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7681 | tcttttctac | ggggtctgac | gctcagtgga | acgaaaactc | acgttaaggg | attttggtca | 7740 |
| 7681 | agaaaagatg | ccccagactg | cgagtcacct | tgcttttgag | tgcaattccc | taaaaccagt | 7740 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7741 | tgagattatc | aaaaaggatc | ttcacctaga | tccttttaaa | ttaaaaatga | agttttaaat | 7800 |
| 7741 | actctaatag | tttttcctag | aagtggatct | aggaaaattt | aatttttact | tcaaaattta | 7800 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7801 | caatctaaag | tatatatgag | taaacttggt | ctgacagtta | ccaatgctta | atcagtgagg | 7860 |
| 7801 | gttagatttc | atatatactc | atttgaacca | gactgtcaat | ggttacgaat | tagtcactcc | 7860 |
| .......... | .......... | .......... | ....... | ORF2 Ampicillin | ....... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7861 | cacctatctc | agcgatctgt | ctatttcgtt | catccatagt | tgcctgactc | cccgtcgtgt | 7920 |
| 7861 | gtggatagag | tcgctagaca | gataaagcaa | gtaggtatca | acggactgag | gggcagcaca | 7920 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7921 | agataactac | gatacgggag | ggcttaccat | ctggccccag | tgctgcaatg | ataccgcgag | 7980 |
| 7921 | tctattgatg | ctatgccctc | ccgaatggta | gaccggggtc | acgacgttac | tatggcgctc | 7980 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 7981 | acccacgctc | accggctcca | gatttatcag | caataaacca | gccagccgga | agggccgagc | 8040 |
| 7981 | tgggtgcgag | tggccgaggt | ctaaatagtc | gttatttggt | cggtcggcct | tcccggctcg | 8040 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8041 | gcagaagtgg | tcctgcaact | ttatccgcct | ccatccagtc | tattaattgt | tgccgggaag | 8100 |
| 8041 | cgtcttcacc | aggacgttga | aataggcgga | ggtaggtcag | ataattaaca | acggcccttc | 8100 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | FspI(8133) | .......... | .......... |
| 8101 | ctagagtaag | tagttcgcca | gttaatagtt | tgcgcaacgt | tgttgccatt | gctacaggca | 8160 |
| 8101 | gatctcattc | atcaagcggt | caattatcaa | acgcgttgca | acaacggtaa | cgatgtccgt | 8160 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8161 | tcgtggtgtc | acgctcgtcg | tttggtatgg | cttcattcag | ctccggttcc | caacgatcaa | 8220 |
| 8161 | agcaccacag | tgcgagcagc | aaaccatacc | gaagtaagtc | gaggccaagg | gttgctagtt | 8220 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8221 | ggcgagttac | atgatccccc | atgttgtgca | aaaaagcggt | tagctccttc | ggtcctccga | 8280 |
| 8221 | ccgctcaatg | tactaggggg | tacaacacgt | tttttcgcca | atcgaggaag | ccaggaggct | 8280 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8281 | tcgttgtcag | aagtaagttg | gccgcagtgt | tatcactcat | ggttatggca | gcactgcata | 8340 |
| 8281 | agcaacagtc | ttcattcaac | cggcgtcaca | atagtgagta | ccaataccgt | cgtgacgtat | 8340 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8341 | attctcttac | tgtcatgcca | tccgtaagat | gcttttctgt | gactggtgag | tactcaacca | 8400 |
| 8341 | taagagaatg | acagtacggt | aggcattcta | cgaaaagaca | ctgaccactc | atgagttggt | 8400 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8401 | agtcattctg | agaatagtgt | atgcggcgac | cgagttgctc | ttgcccggcg | tcaatacggg | 8460 |
| 8401 | tcagtaagac | tcttatcaca | tacgccgctg | gctcaacgag | aacgggccgc | agttatgccc | 8460 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8461 | ataataccgc | gccacatagc | agaactttaa | aagtgctcat | cattggaaaa | cgttcttcgg | 8520 |
| 8461 | tattatggcg | cggtgtatcg | tcttgaaatt | ttcacgagta | gtaacctttt | gcaagaagcc | 8520 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8521 | ggcgaaaact | ctcaaggatc | ttaccgctgt | tgagatccag | ttcgatgtaa | cccactcgtg | 8580 |
| 8521 | ccgcttttga | gagttcctag | aatggcgaca | actctaggtc | aagctacatt | gggtgagcac | 8580 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8581 | cacccaactg | atcttcagca | tcttttactt | tcaccagcgt | ttctgggtga | gcaaaaacag | 8640 |
| 8581 | gtgggttgac | tagaagtcgt | agaaaatgaa | agtggtcgca | aagacccact | cgtttttgtc | 8640 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8641 | gaaggcaaaa | tgccgcaaaa | aagggaataa | gggcgacacg | gaaatgttga | atactcatac | 8700 |
| 8641 | cttccgtttt | acggcgtttt | ttcccttatt | cccgctgtgc | ctttacaact | tatgagtatg | 8700 |
| .......... | ....... | ORF2 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8701 | tcttcctttt | tcaatattat | tgaagcattt | atcagggtta | ttgtctcatg | agcggataca | 8760 |
| 8701 | agaaggaaaa | agttataata | acttcgtaaa | tagtcccaat | aacagagtac | tcgcctatgt | 8760 |
| .......... | .......... | .......... | .......... | AmpR_pro | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8761 | tatttgaatg | tatttagaaa | aataaacaaa | taggggttcc | gcgcacattt | ccccgaaaag | 8820 |
| 8761 | ataaacttac | ataaatcttt | ttatttgttt | atccccaagg | cgcgtgtaaa | ggggcttttc | 8820 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 8821 | tgccacctga | c......... | .......... | .......... | .......... | .......... | 8831 |
| 8821 | acggtggact | g......... | .......... | .......... | .......... | .......... | 8831 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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