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Sequence of pcDNA3.1_NT-GFP_Fusion
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Sequence of pcDNA3.1/NT-GFP Fusion
: 6160 BP; 1476 A; 1571 C; 1542 G; 1571 T; 0 other; |
| .......... | BglII(12) | .......... | .......... | .......... | .......... |
| 1 | gacggatcgg | gagatctccc | gatcccctat | ggtcgactct | cagtacaatc | tgctctgatg | 60 |
| 1 | ctgcctagcc | ctctagaggg | ctaggggata | ccagctgaga | gtcatgttag | acgagactac | 60 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 61 | ccgcatagtt | aagccagtat | ctgctccctg | cttgtgtgtt | ggaggtcgct | gagtagtgcg | 120 |
| 61 | ggcgtatcaa | ttcggtcata | gacgagggac | gaacacacaa | cctccagcga | ctcatcacgc | 120 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 121 | cgagcaaaat | ttaagctaca | acaaggcaag | gcttgaccga | caattgcatg | aagaatctgc | 180 |
| 121 | gctcgtttta | aattcgatgt | tgttccgttc | cgaactggct | gttaacgtac | ttcttagacg | 180 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | NruI(208) | .......... | .......... | .......... |
| 181 | ttagggttag | gcgttttgcg | ctgcttcgcg | atgtacgggc | cagatatacg | cgttgacatt | 240 |
| 181 | aatcccaatc | cgcaaaacgc | gacgaagcgc | tacatgcccg | gtctatatgc | gcaactgtaa | 240 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 241 | gattattgac | tagttattaa | tagtaatcaa | ttacggggtc | attagttcat | agcccatata | 300 |
| 241 | ctaataactg | atcaataatt | atcattagtt | aatgccccag | taatcaagta | tcgggtatat | 300 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 301 | tggagttccg | cgttacataa | cttacggtaa | atggcccgcc | tggctgaccg | cccaacgacc | 360 |
| 301 | acctcaaggc | gcaatgtatt | gaatgccatt | taccgggcgg | accgactggc | gggttgctgg | 360 |
| .......... | ....... | CMV_immearly_pro | CAG_enh | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 361 | cccgcccatt | gacgtcaata | atgacgtatg | ttcccatagt | aacgccaata |
gggactttcc | 420 |
| 361 | gggcgggtaa | ctgcagttat | tactgcatac | aagggtatca | ttgcggttat | ccctgaaagg | 420 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 421 | attgacgtca | atgggtggac | tatttacggt | aaactgccca | cttggcagta |
catcaagtgt | 480 |
| 421 | taactgcagt | tacccacctg | ataaatgcca | tttgacgggt | gaaccgtcat | gtagttcaca | 480 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 481 | atcatatgcc | aagtacgccc | cctattgacg | tcaatgacgg | taaatggccc |
gcctggcatt | 540 |
| 481 | tagtatacgg | ttcatgcggg | ggataactgc | agttactgcc | atttaccggg | cggaccgtaa | 540 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 541 | atgcccagta | catgacctta | tgggactttc | ctacttggca | gtacatctac |
gtattagtca | 600 |
| 541 | tacgggtcat | gtactggaat | accctgaaag | gatgaaccgt | catgtagatg | cataatcagt | 600 |
| .......... | ... | CAG_enh CMV_immearly_pro | ... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 601 | tcgctattac | catggtgatg | cggttttggc | agtacatcaa | tgggcgtgga | tagcggtttg | 660 |
| 601 | agcgataatg | gtaccactac | gccaaaaccg | tcatgtagtt | acccgcacct | atcgccaaac | 660 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 661 | actcacgggg | atttccaagt | ctccacccca | ttgacgtcaa | tgggagtttg | ttttggcacc | 720 |
| 661 | tgagtgcccc | taaaggttca | gaggtggggt | aactgcagtt | accctcaaac | aaaaccgtgg | 720 |
| .......... | ....... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 721 | aaaatcaacg | ggactttcca | aaatgtcgta | acaactccgc | cccattgacg | caaatgggcg | 780 |
| 721 | ttttagttgc | cctgaaaggt | tttacagcat | tgttgaggcg | gggtaactgc | gtttacccgc | 780 |
| .......... | ....... | CMV_immearly_pro | ....... | ......... | CMV_fwd_pri |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 781 | gtaggcgtgt | acggtgggag | gtctatataa | gcagagctct | ctggctaact | agagaaccca | 840 |
| 781 | catccgcaca | tgccaccctc | cagatatatt | cgtctcgaga | gaccgattga | tctcttgggt | 840 |
| CMV_fwd_pri | ..... | CMV_immearly_pro | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 841 | ctgcttactg | gcttatcgaa | attaatacga | ctcactatag | ggagacccaa | gctggctaga | 900 |
| 841 | gacgaatgac | cgaatagctt | taattatgct | gagtgatatc | cctctgggtt | cgaccgatct | 900 |
| CMV_immearly_pro | .... | .......... | T7_pro | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 901 | caccatggcc | agcaaaggag | aagaactttt | cactggagtt | gtcccaattc | ttgttgaatt | 960 |
| 901 | gtggtaccgg | tcgtttcctc | ttcttgaaaa | gtgacctcaa | cagggttaag | aacaacttaa | 960 |
| .......... | .......... | ........ | ORF 2 GFP_ORF | GFP_R_pri | ........ |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 961 | agatggtgat | gttaatgggc | acaaattttc | tgtcagtgga | gagggtgaag |
gtgatgctac | 1020 |
| 961 | tctaccacta | caattacccg | tgtttaaaag | acagtcacct | ctcccacttc | cactacgatg | 1020 |
| .......... | ..... | ORF 2 GFP_ORF | GFPfusionREV_pri | ..... | .......... |
| HindIII(1028) | ...... | .......... | .......... | .......... | .......... |
| 1021 | atacggaaag | cttaccctta | aatttatttg | cactactgga | aaactacctg | ttccatggcc | 1080 |
| 1021 | tatgcctttc | gaatgggaat | ttaaataaac | gtgatgacct | tttgatggac | aaggtaccgg | 1080 |
| .......... | ........ | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1081 | aacacttgtc | actactttct | cttatggtgt | tcaatgcttt | tcccgttatc | cggatcatat | 1140 |
| 1081 | ttgtgaacag | tgatgaaaga | gaataccaca | agttacgaaa | agggcaatag | gcctagtata | 1140 |
| .......... | ........ | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1141 | gaaacggcat | gactttttca | agagtgccat | gcccgaaggt | tatgtacagg | aacgcactat | 1200 |
| 1141 | ctttgccgta | ctgaaaaagt | tctcacggta | cgggcttcca | atacatgtcc | ttgcgtgata | 1200 |
| .......... | ........ | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1201 | atctttcaaa | gatgacggga | actacaagac | gcgtgctgaa | gtcaagtttg | aaggtgatac | 1260 |
| 1201 | tagaaagttt | ctactgccct | tgatgttctg | cgcacgactt | cagttcaaac | ttccactatg | 1260 |
| .......... | ........ | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1261 | ccttgttaat | cgtatcgagt | taaaaggtat | tgattttaaa | gaagatggaa | acattctcgg | 1320 |
| 1261 | ggaacaatta | gcatagctca | attttccata | actaaaattt | cttctacctt | tgtaagagcc | 1320 |
| .......... | ........ | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1321 | acacaaactc | gagtacaact | ataactcaca | caatgtatac | atcacggcag | acaaacaaaa | 1380 |
| 1321 | tgtgtttgag | ctcatgttga | tattgagtgt | gttacatatg | tagtgccgtc | tgtttgtttt | 1380 |
| .......... | ........ | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1381 | gaatggaatc | aaagctaact | tcaaaattcg | ccacaacatt | gaagatggat | ccgttcaact | 1440 |
| 1381 | cttaccttag | tttcgattga | agttttaagc | ggtgttgtaa | cttctaccta | ggcaagttga | 1440 |
| .......... | ........ | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1441 | agcagaccat | tatcaacaaa | atactccaat | tggcgatggc | cctgtccttt | taccagacaa | 1500 |
| 1441 | tcgtctggta | atagttgttt | tatgaggtta | accgctaccg | ggacaggaaa | atggtctgtt | 1500 |
| .......... | ........ | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1501 | ccattacctg | tcgacacaat | ctgccctttc | gaaagatccc | aacgaaaagc | gtgaccacat | 1560 |
| 1501 | ggtaatggac | agctgtgtta | gacgggaaag | ctttctaggg | ttgcttttcg | cactggtgta | 1560 |
| .......... | ........ | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1561 | ggtccttctt | gagtttgtaa | ctgctgctgg | gattacacat | ggcatggatg | agctctacaa | 1620 |
| 1561 | ccaggaagaa | ctcaaacatt | gacgacgacc | ctaatgtgta | ccgtacctac | tcgagatgtt | 1620 |
| ........ | GFP_F_pri | ORF 2 GFP_ORF | ........ | .......... | .......... |
| .... | AgeI(1633) NheI(1639) | KpnI(1649) | .... | .......... | .......... |
| 1621 | aagcggttcc | ggaccggtgc | tagcggtacc | gagctcggat | ccactagtcc | agtgtggtgg | 1680 |
| 1621 | ttcgccaagg | cctggccacg | atcgccatgg | ctcgagccta | ggtgatcagg | tcacaccacc | 1680 |
| .......... | .......... | ORF 2 | .......... | .......... | .......... |
| ......... | EcoRV(1692) | NotI(1707) | XbaI(1719) | ApaI(1729) | ......... |
| 1681 | aattctgcag | atatccagca | cagtggcggc | cgctcgagtc | tagagggccc | gtttaaaccc | 1740 |
| 1681 | ttaagacgtc | tataggtcgt | gtcaccgccg | gcgagctcag | atctcccggg | caaatttggg | 1740 |
| .......... | .......... | ORF 2 | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1741 | gctgatcagc | ctcgactgtg | ccttctagtt | gccagccatc | tgttgtttgc | ccctcccccg | 1800 |
| 1741 | cgactagtcg | gagctgacac | ggaagatcaa | cggtcggtag | acaacaaacg | gggagggggc | 1800 |
| ......... | BGH_rev_pri | ........ | bGH_PA_term | ......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1801 | tgccttcctt | gaccctggaa | ggtgccactc | ccactgtcct | ttcctaataa | aatgaggaaa | 1860 |
| 1801 | acggaaggaa | ctgggacctt | ccacggtgag | ggtgacagga | aaggattatt | ttactccttt | 1860 |
| .......... | ......... | bGH_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1861 | ttgcatcgca | ttgtctgagt | aggtgtcatt | ctattctggg | gggtggggtg | gggcaggaca | 1920 |
| 1861 | aacgtagcgt | aacagactca | tccacagtaa | gataagaccc | cccaccccac | cccgtcctgt | 1920 |
| .......... | ......... | bGH_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1921 | gcaaggggga | ggattgggaa | gacaatagca | ggcatgctgg | ggatgcggtg | ggctctatgg | 1980 |
| 1921 | cgttccccct | cctaaccctt | ctgttatcgt | ccgtacgacc | cctacgccac | ccgagatacc | 1980 |
| .......... | ......... | bGH_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 1981 | cttctgaggc | ggaaagaacc | agctggggct | ctagggggta | tccccacgcg | ccctgtagcg | 2040 |
| 1981 | gaagactccg | cctttcttgg | tcgaccccga | gatcccccat | aggggtgcgc | gggacatcgc | 2040 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2041 | gcgcattaag | cgcggcgggt | gtggtggtta | cgcgcagcgt | gaccgctaca | cttgccagcg | 2100 |
| 2041 | cgcgtaattc | gcgccgccca | caccaccaat | gcgcgtcgca | ctggcgatgt | gaacggtcgc | 2100 |
| .......... | .......... | .......... | f1_origin | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2101 | ccctagcgcc | cgctcctttc | gctttcttcc | cttcctttct | cgccacgttc | gccggctttc | 2160 |
| 2101 | gggatcgcgg | gcgaggaaag | cgaaagaagg | gaaggaaaga | gcggtgcaag | cggccgaaag | 2160 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2161 | cccgtcaagc | tctaaatcgg | ggcatccctt | tagggttccg | atttagtgct | ttacggcacc | 2220 |
| 2161 | gggcagttcg | agatttagcc | ccgtagggaa | atcccaaggc | taaatcacga | aatgccgtgg | 2220 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2221 | tcgaccccaa | aaaacttgat | tagggtgatg | gttcacgtag | tgggccatcg | ccctgataga | 2280 |
| 2221 | agctggggtt | ttttgaacta | atcccactac | caagtgcatc | acccggtagc | gggactatct | 2280 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2281 | cggtttttcg | ccctttgacg | ttggagtcca | cgttctttaa | tagtggactc | ttgttccaaa | 2340 |
| 2281 | gccaaaaagc | gggaaactgc | aacctcaggt | gcaagaaatt | atcacctgag | aacaaggttt | 2340 |
| .......... | .......... | f1_origin | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2341 | ctggaacaac | actcaaccct | atctcggtct | attcttttga | tttataaggg | attttgggga | 2400 |
| 2341 | gaccttgttg | tgagttggga | tagagccaga | taagaaaact | aaatattccc | taaaacccct | 2400 |
| f1_origin | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2401 | tttcggccta | ttggttaaaa | aatgagctga | tttaacaaaa | atttaacgcg | aattaattct | 2460 |
| 2401 | aaagccggat | aaccaatttt | ttactcgact | aaattgtttt | taaattgcgc | ttaattaaga | 2460 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2461 | gtggaatgtg | tgtcagttag | ggtgtggaaa | gtccccaggc | tccccaggca | ggcagaagta | 2520 |
| 2461 | caccttacac | acagtcaatc | ccacaccttt | caggggtccg | aggggtccgt | ccgtcttcat | 2520 |
| ......... | pBABE_3_pri | ..... | SV40_enh SV40_pro | ...... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2521 | tgcaaagcat | gcatctcaat | tagtcagcaa | ccaggtgtgg | aaagtcccca | ggctccccag | 2580 |
| 2521 | acgtttcgta | cgtagagtta | atcagtcgtt | ggtccacacc | tttcaggggt | ccgaggggtc | 2580 |
| .......... | ...... | SV40_enh SV40_pro | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2581 | caggcagaag | tatgcaaagc | atgcatctca | attagtcagc | aaccatagtc | ccgcccctaa | 2640 |
| 2581 | gtccgtcttc | atacgtttcg | tacgtagagt | taatcagtcg | ttggtatcag | ggcggggatt | 2640 |
| .......... | ...... | SV40_enh SV40_pro | ...... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2641 | ctccgcccat | cccgccccta | actccgccca | gttccgccca | ttctccgccc | catggctgac | 2700 |
| 2641 | gaggcgggta | gggcggggat | tgaggcgggt | caaggcgggt | aagaggcggg | gtaccgactg | 2700 |
| .......... | ..... | SV40_enh SV40_pro | SV40_origin | ..... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2701 | taattttttt | tatttatgca | gaggccgagg | ccgcctctgc | ctctgagcta | ttccagaagt | 2760 |
| 2701 | attaaaaaaa | ataaatacgt | ctccggctcc | ggcggagacg | gagactcgat | aaggtcttca | 2760 |
| .. | SV40_origin SV40pro_F_pri | SV40_pro | .. | .......... | .......... |
| .......... | .......... | StuI(2782) | .......... | SmaI(2806) | .......... |
| 2761 | agtgaggagg | cttttttgga | ggcctaggct | tttgcaaaaa | gctcccggga | gcttgtatat | 2820 |
| 2761 | tcactcctcc | gaaaaaacct | ccggatccga | aaacgttttt | cgagggccct | cgaacatata | 2820 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2821 | ccattttcgg | atctgatcaa | gagacaggat | gaggatcgtt | tcgcatgatt | gaacaagatg | 2880 |
| 2821 | ggtaaaagcc | tagactagtt | ctctgtccta | ctcctagcaa | agcgtactaa | cttgttctac | 2880 |
| .......... | .......... | .......... | .......... | ........ | ORF 3 Neomycin |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 2881 | gattgcacgc | aggttctccg | gccgcttggg | tggagaggct | attcggctat | gactgggcac | 2940 |
| 2881 | ctaacgtgcg | tccaagaggc | cggcgaaccc | acctctccga | taagccgata | ctgacccgtg | 2940 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | NarI(2993) |
| 2941 | aacagacaat | cggctgctct | gatgccgccg | tgttccggct | gtcagcgcag | gggcgcccgg | 3000 |
| 2941 | ttgtctgtta | gccgacgaga | ctacggcggc | acaaggccga | cagtcgcgtc | cccgcgggcc | 3000 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3001 | ttctttttgt | caagaccgac | ctgtccggtg | ccctgaatga | actgcaggac | gaggcagcgc | 3060 |
| 3001 | aagaaaaaca | gttctggctg | gacaggccac | gggacttact | tgacgtcctg | ctccgtcgcg | 3060 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3061 | ggctatcgtg | gctggccacg | acgggcgttc | cttgcgcagc | tgtgctcgac | gttgtcactg | 3120 |
| 3061 | ccgatagcac | cgaccggtgc | tgcccgcaag | gaacgcgtcg | acacgagctg | caacagtgac | 3120 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3121 | aagcgggaag | ggactggctg | ctattgggcg | aagtgccggg | gcaggatctc | ctgtcatctc | 3180 |
| 3121 | ttcgcccttc | cctgaccgac | gataacccgc | ttcacggccc | cgtcctagag | gacagtagag | 3180 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3181 | accttgctcc | tgccgagaaa | gtatccatca | tggctgatgc | aatgcggcgg | ctgcatacgc | 3240 |
| 3181 | tggaacgagg | acggctcttt | cataggtagt | accgactacg | ttacgccgcc | gacgtatgcg | 3240 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3241 | ttgatccggc | tacctgccca | ttcgaccacc | aagcgaaaca | tcgcatcgag | cgagcacgta | 3300 |
| 3241 | aactaggccg | atggacgggt | aagctggtgg | ttcgctttgt | agcgtagctc | gctcgtgcat | 3300 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3301 | ctcggatgga | agccggtctt | gtcgatcagg | atgatctgga | cgaagagcat | caggggctcg | 3360 |
| 3301 | gagcctacct | tcggccagaa | cagctagtcc | tactagacct | gcttctcgta | gtccccgagc | 3360 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3361 | cgccagccga | actgttcgcc | aggctcaagg | cgcgcatgcc | cgacggcgag | gatctcgtcg | 3420 |
| 3361 | gcggtcggct | tgacaagcgg | tccgagttcc | gcgcgtacgg | gctgccgctc | ctagagcagc | 3420 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3421 | tgacccatgg | cgatgcctgc | ttgccgaata | tcatggtgga | aaatggccgc | ttttctggat | 3480 |
| 3421 | actgggtacc | gctacggacg | aacggcttat | agtaccacct | tttaccggcg | aaaagaccta | 3480 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3481 | tcatcgactg | tggccggctg | ggtgtggcgg | accgctatca | ggacatagcg | ttggctaccc | 3540 |
| 3481 | agtagctgac | accggccgac | ccacaccgcc | tggcgatagt | cctgtatcgc | aaccgatggg | 3540 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3541 | gtgatattgc | tgaagagctt | ggcggcgaat | gggctgaccg | cttcctcgtg | ctttacggta | 3600 |
| 3541 | cactataacg | acttctcgaa | ccgccgctta | cccgactggc | gaaggagcac | gaaatgccat | 3600 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3601 | tcgccgctcc | cgattcgcag | cgcatcgcct | tctatcgcct | tcttgacgag | ttcttctgag | 3660 |
| 3601 | agcggcgagg | gctaagcgtc | gcgtagcgga | agatagcgga | agaactgctc | aagaagactc | 3660 |
| .......... | ........ | ORF 3 Neomycin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3661 | cgggactctg | gggttcgaaa | tgaccgacca | agcgacgccc | aacctgccat | cacgagattt | 3720 |
| 3661 | gccctgagac | cccaagcttt | actggctggt | tcgctgcggg | ttggacggta | gtgctctaaa | 3720 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3721 | cgattccacc | gccgccttct | atgaaaggtt | gggcttcgga | atcgttttcc | gggacgccgg | 3780 |
| 3721 | gctaaggtgg | cggcggaaga | tactttccaa | cccgaagcct | tagcaaaagg | ccctgcggcc | 3780 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3781 | ctggatgatc | ctccagcgcg | gggatctcat | gctggagttc | ttcgcccacc | ccaacttgtt | 3840 |
| 3781 | gacctactag | gaggtcgcgc | ccctagagta | cgacctcaag | aagcgggtgg | ggttgaacaa | 3840 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3841 | tattgcagct | tataatggtt | acaaataaag | caatagcatc | acaaatttca | caaataaagc | 3900 |
| 3841 | ataacgtcga | atattaccaa | tgtttatttc | gttatcgtag | tgtttaaagt | gtttatttcg | 3900 |
| .......... | ......... | SV40_PA_term | ......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3901 | atttttttca | ctgcattcta | gttgtggttt | gtccaaactc | atcaatgtat | cttatcatgt | 3960 |
| 3901 | taaaaaaagt | gacgtaagat | caacaccaaa | caggtttgag | tagttacata | gaatagtaca | 3960 |
| .......... | ........ | SV40_PA_term | EBV_rev_pri | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 3961 | ctgtataccg | tcgacctcta | gctagagctt | ggcgtaatca | tggtcatagc | tgtttcctgt | 4020 |
| 3961 | gacatatggc | agctggagat | cgatctcgaa | ccgcattagt | accagtatcg | acaaaggaca | 4020 |
| .......... | .......... | .......... | ....... | M13_reverse_pri | ....... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4021 | gtgaaattgt | tatccgctca | caattccaca | caacatacga | gccggaagca | taaagtgtaa | 4080 |
| 4021 | cactttaaca | ataggcgagt | gttaaggtgt | gttgtatgct | cggccttcgt | atttcacatt | 4080 |
| M13_pUC_rev_pri | .... | .......... | .......... | lac_pro | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4081 | agcctggggt | gcctaatgag | tgagctaact | cacattaatt | gcgttgcgct | cactgcccgc | 4140 |
| 4081 | tcggacccca | cggattactc | actcgattga | gtgtaattaa | cgcaacgcga | gtgacgggcg | 4140 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4141 | tttccagtcg | ggaaacctgt | cgtgccagct | gcattaatga | atcggccaac | gcgcggggag | 4200 |
| 4141 | aaaggtcagc | cctttggaca | gcacggtcga | cgtaattact | tagccggttg | cgcgcccctc | 4200 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4201 | aggcggtttg | cgtattgggc | gctcttccgc | ttcctcgctc | actgactcgc | tgcgctcggt | 4260 |
| 4201 | tccgccaaac | gcataacccg | cgagaaggcg | aaggagcgag | tgactgagcg | acgcgagcca | 4260 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4261 | cgttcggctg | cggcgagcgg | tatcagctca | ctcaaaggcg | gtaatacggt | tatccacaga | 4320 |
| 4261 | gcaagccgac | gccgctcgcc | atagtcgagt | gagtttccgc | cattatgcca | ataggtgtct | 4320 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4321 | atcaggggat | aacgcaggaa | agaacatgtg | agcaaaaggc | cagcaaaagg | ccaggaaccg | 4380 |
| 4321 | tagtccccta | ttgcgtcctt | tcttgtacac | tcgttttccg | gtcgttttcc | ggtccttggc | 4380 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4381 | taaaaaggcc | gcgttgctgg | cgtttttcca | taggctccgc | ccccctgacg | agcatcacaa | 4440 |
| 4381 | atttttccgg | cgcaacgacc | gcaaaaaggt | atccgaggcg | gggggactgc | tcgtagtgtt | 4440 |
| .......... | .......... | ........ | pBR322_origin | ........ | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4441 | aaatcgacgc | tcaagtcaga | ggtggcgaaa | cccgacagga | ctataaagat | accaggcgtt | 4500 |
| 4441 | tttagctgcg | agttcagtct | ccaccgcttt | gggctgtcct | gatatttcta | tggtccgcaa | 4500 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4501 | tccccctgga | agctccctcg | tgcgctctcc | tgttccgacc | ctgccgctta | ccggatacct | 4560 |
| 4501 | agggggacct | tcgagggagc | acgcgagagg | acaaggctgg | gacggcgaat | ggcctatgga | 4560 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4561 | gtccgccttt | ctcccttcgg | gaagcgtggc | gctttctcaa | tgctcacgct | gtaggtatct | 4620 |
| 4561 | caggcggaaa | gagggaagcc | cttcgcaccg | cgaaagagtt | acgagtgcga | catccataga | 4620 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4621 | cagttcggtg | taggtcgttc | gctccaagct | gggctgtgtg | cacgaacccc | ccgttcagcc | 4680 |
| 4621 | gtcaagccac | atccagcaag | cgaggttcga | cccgacacac | gtgcttgggg | ggcaagtcgg | 4680 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4681 | cgaccgctgc | gccttatccg | gtaactatcg | tcttgagtcc | aacccggtaa | gacacgactt | 4740 |
| 4681 | gctggcgacg | cggaataggc | cattgatagc | agaactcagg | ttgggccatt | ctgtgctgaa | 4740 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4741 | atcgccactg | gcagcagcca | ctggtaacag | gattagcaga | gcgaggtatg | taggcggtgc | 4800 |
| 4741 | tagcggtgac | cgtcgtcggt | gaccattgtc | ctaatcgtct | cgctccatac | atccgccacg | 4800 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4801 | tacagagttc | ttgaagtggt | ggcctaacta | cggctacact | agaaggacag | tatttggtat | 4860 |
| 4801 | atgtctcaag | aacttcacca | ccggattgat | gccgatgtga | tcttcctgtc | ataaaccata | 4860 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4861 | ctgcgctctg | ctgaagccag | ttaccttcgg | aaaaagagtt | ggtagctctt | gatccggcaa | 4920 |
| 4861 | gacgcgagac | gacttcggtc | aatggaagcc | tttttctcaa | ccatcgagaa | ctaggccgtt | 4920 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4921 | acaaaccacc | gctggtagcg | gtggtttttt | tgtttgcaag | cagcagatta | cgcgcagaaa | 4980 |
| 4921 | tgtttggtgg | cgaccatcgc | caccaaaaaa | acaaacgttc | gtcgtctaat | gcgcgtcttt | 4980 |
| .......... | ........ | pBR322_origin | ........ | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 4981 | aaaaggatct | caagaagatc | ctttgatctt | ttctacgggg | tctgacgctc | agtggaacga | 5040 |
| 4981 | ttttcctaga | gttcttctag | gaaactagaa | aagatgcccc | agactgcgag | tcaccttgct | 5040 |
| ........ | pBR322_origin | ........ | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5041 | aaactcacgt | taagggattt | tggtcatgag | attatcaaaa | aggatcttca | cctagatcct | 5100 |
| 5041 | tttgagtgca | attccctaaa | accagtactc | taatagtttt | tcctagaagt | ggatctagga | 5100 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5101 | tttaaattaa | aaatgaagtt | ttaaatcaat | ctaaagtata | tatgagtaaa | cttggtctga | 5160 |
| 5101 | aaatttaatt | tttacttcaa | aatttagtta | gatttcatat | atactcattt | gaaccagact | 5160 |
| .......... | .......... | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5161 | cagttaccaa | tgcttaatca | gtgaggcacc | tatctcagcg | atctgtctat | ttcgttcatc | 5220 |
| 5161 | gtcaatggtt | acgaattagt | cactccgtgg | atagagtcgc | tagacagata | aagcaagtag | 5220 |
| .......... | .......... | ....... | ORF 1 Ampicillin | ....... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5221 | catagttgcc | tgactccccg | tcgtgtagat | aactacgata | cgggagggct | taccatctgg | 5280 |
| 5221 | gtatcaacgg | actgaggggc | agcacatcta | ttgatgctat | gccctcccga | atggtagacc | 5280 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5281 | ccccagtgct | gcaatgatac | cgcgagaccc | acgctcaccg | gctccagatt | tatcagcaat | 5340 |
| 5281 | ggggtcacga | cgttactatg | gcgctctggg | tgcgagtggc | cgaggtctaa | atagtcgtta | 5340 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5341 | aaaccagcca | gccggaaggg | ccgagcgcag | aagtggtcct | gcaactttat | ccgcctccat | 5400 |
| 5341 | tttggtcggt | cggccttccc | ggctcgcgtc | ttcaccagga | cgttgaaata | ggcggaggta | 5400 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5401 | ccagtctatt | aattgttgcc | gggaagctag | agtaagtagt | tcgccagtta | atagtttgcg | 5460 |
| 5401 | ggtcagataa | ttaacaacgg | cccttcgatc | tcattcatca | agcggtcaat | tatcaaacgc | 5460 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5461 | caacgttgtt | gccattgcta | caggcatcgt | ggtgtcacgc | tcgtcgtttg | gtatggcttc | 5520 |
| 5461 | gttgcaacaa | cggtaacgat | gtccgtagca | ccacagtgcg | agcagcaaac | cataccgaag | 5520 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5521 | attcagctcc | ggttcccaac | gatcaaggcg | agttacatga | tcccccatgt | tgtgcaaaaa | 5580 |
| 5521 | taagtcgagg | ccaagggttg | ctagttccgc | tcaatgtact | agggggtaca | acacgttttt | 5580 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5581 | agcggttagc | tccttcggtc | ctccgatcgt | tgtcagaagt | aagttggccg | cagtgttatc | 5640 |
| 5581 | tcgccaatcg | aggaagccag | gaggctagca | acagtcttca | ttcaaccggc | gtcacaatag | 5640 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5641 | actcatggtt | atggcagcac | tgcataattc | tcttactgtc | atgccatccg | taagatgctt | 5700 |
| 5641 | tgagtaccaa | taccgtcgtg | acgtattaag | agaatgacag | tacggtaggc | attctacgaa | 5700 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5701 | ttctgtgact | ggtgagtact | caaccaagtc | attctgagaa | tagtgtatgc | ggcgaccgag | 5760 |
| 5701 | aagacactga | ccactcatga | gttggttcag | taagactctt | atcacatacg | ccgctggctc | 5760 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5761 | ttgctcttgc | ccggcgtcaa | tacgggataa | taccgcgcca | catagcagaa | ctttaaaagt | 5820 |
| 5761 | aacgagaacg | ggccgcagtt | atgccctatt | atggcgcggt | gtatcgtctt | gaaattttca | 5820 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5821 | gctcatcatt | ggaaaacgtt | cttcggggcg | aaaactctca | aggatcttac | cgctgttgag | 5880 |
| 5821 | cgagtagtaa | ccttttgcaa | gaagccccgc | ttttgagagt | tcctagaatg | gcgacaactc | 5880 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5881 | atccagttcg | atgtaaccca | ctcgtgcacc | caactgatct | tcagcatctt | ttactttcac | 5940 |
| 5881 | taggtcaagc | tacattgggt | gagcacgtgg | gttgactaga | agtcgtagaa | aatgaaagtg | 5940 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 5941 | cagcgtttct | gggtgagcaa | aaacaggaag | gcaaaatgcc | gcaaaaaagg | gaataagggc | 6000 |
| 5941 | gtcgcaaaga | cccactcgtt | tttgtccttc | cgttttacgg | cgttttttcc | cttattcccg | 6000 |
| .......... | ....... | ORF 1 Ampicillin | ....... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6001 | gacacggaaa | tgttgaatac | tcatactctt | cctttttcaa | tattattgaa | gcatttatca | 6060 |
| 6001 | ctgtgccttt | acaacttatg | agtatgagaa | ggaaaaagtt | ataataactt | cgtaaatagt | 6060 |
| ....... | ORF 1 Ampicillin | ....... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6061 | gggttattgt | ctcatgagcg | gatacatatt | tgaatgtatt | tagaaaaata | aacaaatagg | 6120 |
| 6061 | cccaataaca | gagtactcgc | ctatgtataa | acttacataa | atctttttat | ttgtttatcc | 6120 |
| .......... | AmpR_pro | .......... | .......... | .......... | .......... |
| .......... | .......... | .......... | .......... | .......... | .......... |
| 6121 | ggttccgcgc | acatttcccc | gaaaagtgcc | acctgacgtc | .......... | .......... | 6160 |
| 6121 | ccaaggcgcg | tgtaaagggg | cttttcacgg | tggactgcag | .......... | .......... | 6160 |
| .......... | .......... | .......... | .......... | .......... | .......... |
References
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